RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 IGSF10Q6WRI0 2623 aa10.29□□□□□ -0.76
SDC1-202ENST00000381150 TMEM223A0PJW6 202 aa10.29□□□□□ -0.76
SDC1-202ENST00000381150 ADAMTSL4-AS1Q5T5F5 129 aa10.29□□□□□ -0.76
SDC1-202ENST00000381150 AMELXQ99217 191 aa10.29□□□□□ -0.76
SDC1-202ENST00000381150 TIMM17AQ99595 171 aa10.29□□□□□ -0.76
SDC1-202ENST00000381150 SPINK13Q1W4C9 94 aa10.28□□□□□ -0.76
SDC1-202ENST00000381150 PPDPFQ9H3Y8 114 aa10.28□□□□□ -0.76
SDC1-202ENST00000381150 MOB4Q9Y3A3 225 aa10.28□□□□□ -0.76
SDC1-202ENST00000381150 C9orf153Q5TBE3 101 aa10.27□□□□□ -0.76
SDC1-202ENST00000381150 A0A0B4J2C4 111 aa10.27□□□□□ -0.77
SDC1-202ENST00000381150 IGHV3-38A0A0C4DH36 116 aa10.27□□□□□ -0.77
SDC1-202ENST00000381150 PRM2P04554 102 aa10.27□□□□□ -0.77
SDC1-202ENST00000381150 IGHV4-38-2P0DP08 117 aa10.27□□□□□ -0.77
SDC1-202ENST00000381150 MRPL53Q96EL3 112 aaKnown RBP10.27□□□□□ -0.77
SDC1-202ENST00000381150 PIMREGQ9BSJ6 248 aa10.27□□□□□ -0.77
SDC1-202ENST00000381150 CCDC168Q8NDH2 2452 aa10.27□□□□□ -0.77
SDC1-202ENST00000381150 ACACBO00763 2458 aa10.27□□□□□ -0.77
SDC1-202ENST00000381150 CCL19Q99731 98 aa10.27□□□□□ -0.77
SDC1-202ENST00000381150 ID1P41134 155 aa10.26□□□□□ -0.77
SDC1-202ENST00000381150 IGHV4-30-2A0A087WSY4 118 aa10.26□□□□□ -0.77
SDC1-202ENST00000381150 PROK1P58294 105 aa10.26□□□□□ -0.77
SDC1-202ENST00000381150 FAM110AQ9BQ89 295 aa10.26□□□□□ -0.77
SDC1-202ENST00000381150 KLK5Q9Y337 293 aaPredicted RBP10.26□□□□□ -0.77
SDC1-202ENST00000381150 LINC00315P59091 139 aa10.25□□□□□ -0.77
SDC1-202ENST00000381150 UTP20O75691 2785 aaKnown RBP10.25□□□□□ -0.77
SDC1-202ENST00000381150 I3L3M4 83 aa10.25□□□□□ -0.77
SDC1-202ENST00000381150 DOPEY1Q5JWR5 2465 aa10.24□□□□□ -0.77
SDC1-202ENST00000381150 TMEM101Q96IK0 257 aa10.24□□□□□ -0.77
SDC1-202ENST00000381150 LENEPQ9Y5L5 61 aa10.24□□□□□ -0.77
SDC1-202ENST00000381150 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.24□□□□□ -0.77
SDC1-202ENST00000381150 LOC107984640A0A0U1RRK4 108 aa10.24□□□□□ -0.77
SDC1-202ENST00000381150 IGKV2-29A2NJV5 120 aaPredicted RBP10.24□□□□□ -0.77
SDC1-202ENST00000381150 FN1P02751 2386 aaKnown RBP10.24□□□□□ -0.77
SDC1-202ENST00000381150 IGLV4-3A0A075B6K6 122 aa10.24□□□□□ -0.77
SDC1-202ENST00000381150 FAM223BA6NKX1 122 aa10.24□□□□□ -0.77
SDC1-202ENST00000381150 FAM223AQ8IWN6 122 aa10.24□□□□□ -0.77
SDC1-202ENST00000381150 KIF25-AS1Q9Y6Z4 181 aa10.24□□□□□ -0.77
SDC1-202ENST00000381150 BRI3O95415 125 aa10.23□□□□□ -0.77
SDC1-202ENST00000381150 DGAT2L7PQ6IED9 249 aa10.23□□□□□ -0.77
SDC1-202ENST00000381150 C20orf203Q8NBC4 194 aa10.23□□□□□ -0.77
SDC1-202ENST00000381150 MYO18BQ8IUG5 2567 aa10.23□□□□□ -0.77
SDC1-202ENST00000381150 A6NDX4 124 aa10.23□□□□□ -0.77
SDC1-202ENST00000381150 EDA2RQ9HAV5 297 aa10.23□□□□□ -0.77
SDC1-202ENST00000381150 TRBV30A0A0K0K1B3 111 aa10.22□□□□□ -0.77
SDC1-202ENST00000381150 AVPP01185 164 aa10.22□□□□□ -0.77
SDC1-202ENST00000381150 IGHG2P01859 326 aa10.22□□□□□ -0.77
SDC1-202ENST00000381150 ATP5J2P56134 94 aa10.22□□□□□ -0.77
SDC1-202ENST00000381150 ZFYVE26Q68DK2 2539 aa10.22□□□□□ -0.77
SDC1-202ENST00000381150 TRBV27A0A0K0K1C4 114 aa10.22□□□□□ -0.77
SDC1-202ENST00000381150 LINC00694P0DN24 101 aa10.22□□□□□ -0.77
SDC1-202ENST00000381150 IGHV4OR15-8A0A075B7B6 117 aa10.22□□□□□ -0.77
SDC1-202ENST00000381150 A0A087WW49 117 aa10.22□□□□□ -0.77
SDC1-202ENST00000381150 M0QY20 66 aa10.22□□□□□ -0.77
SDC1-202ENST00000381150 HOXD3P31249 432 aaPredicted RBP10.22□□□□□ -0.77
SDC1-202ENST00000381150 TNFRSF18Q9Y5U5 241 aa10.22□□□□□ -0.77
SDC1-202ENST00000381150 NAV2Q8IVL1 2488 aa10.21□□□□□ -0.77
SDC1-202ENST00000381150 IGHV3-16A0A0C4DH30 117 aa10.21□□□□□ -0.77
SDC1-202ENST00000381150 SYNJ2BPP57105 145 aa10.21□□□□□ -0.77
SDC1-202ENST00000381150 Q9UF83 564 aa10.21□□□□□ -0.77
SDC1-202ENST00000381150 M0QXV9 152 aa10.21□□□□□ -0.78
SDC1-202ENST00000381150 MSMBP08118 114 aa10.21□□□□□ -0.78
SDC1-202ENST00000381150 BLCAPP62952 87 aa10.21□□□□□ -0.78
SDC1-202ENST00000381150 HIST2H2BDQ6DRA6 164 aa10.21□□□□□ -0.78
SDC1-202ENST00000381150 GAGE2AQ6NT46 116 aa10.21□□□□□ -0.78
SDC1-202ENST00000381150 H3BUX3 64 aa10.2□□□□□ -0.78
SDC1-202ENST00000381150 EPG5Q9HCE0 2579 aa10.2□□□□□ -0.78
SDC1-202ENST00000381150 NXPH4O95158 308 aa10.2□□□□□ -0.78
SDC1-202ENST00000381150 YAE1D1Q9NRH1 226 aa10.2□□□□□ -0.78
SDC1-202ENST00000381150 ABCA12Q86UK0 2595 aa10.19□□□□□ -0.78
SDC1-202ENST00000381150 POM121L12Q8N7R1 296 aa10.19□□□□□ -0.78
SDC1-202ENST00000381150 NRGNQ92686 78 aa10.18□□□□□ -0.78
SDC1-202ENST00000381150 VPREB3Q9UKI3 123 aa10.18□□□□□ -0.78
SDC1-202ENST00000381150 FBN2P35556 2912 aa10.18□□□□□ -0.78
SDC1-202ENST00000381150 NDUFA4O00483 81 aa10.18□□□□□ -0.78
SDC1-202ENST00000381150 H3BT86 120 aa10.18□□□□□ -0.78
SDC1-202ENST00000381150 H3BUA1 57 aa10.18□□□□□ -0.78
SDC1-202ENST00000381150 IGLV1-40P01703 118 aa10.18□□□□□ -0.78
SDC1-202ENST00000381150 Q9HAA7 133 aa10.18□□□□□ -0.78
SDC1-202ENST00000381150 NIPBLQ6KC79 2804 aaeCLIP10.17□□□□□ -0.78
SDC1-202ENST00000381150 SOCS3O14543 225 aa10.17□□□□□ -0.78
SDC1-202ENST00000381150 CFHR3Q02985 330 aa10.17□□□□□ -0.78
SDC1-202ENST00000381150 RHOHQ15669 191 aa10.17□□□□□ -0.78
SDC1-202ENST00000381150 Q6Q795 121 aa10.17□□□□□ -0.78
SDC1-202ENST00000381150 USMG5Q96IX5 58 aa10.17□□□□□ -0.78
SDC1-202ENST00000381150 DAZ1Q9NQZ3 744 aaKnown RBP10.17□□□□□ -0.78
SDC1-202ENST00000381150 TRAV13-1A0A0B4J241 112 aa10.17□□□□□ -0.78
SDC1-202ENST00000381150 IGHV1-58A0A0C4DH39 117 aa10.17□□□□□ -0.78
SDC1-202ENST00000381150 IGKV3OR2-268A0A0C4DH90 116 aa10.17□□□□□ -0.78
SDC1-202ENST00000381150 LST1O00453 97 aa10.17□□□□□ -0.78
SDC1-202ENST00000381150 MIAQ16674 131 aa10.17□□□□□ -0.78
SDC1-202ENST00000381150 CIRBPQ14011 172 aaKnown RBP10.16□□□□□ -0.78
SDC1-202ENST00000381150 A0A096LNT2 108 aa10.16□□□□□ -0.78
SDC1-202ENST00000381150 TMEM61Q8N0U2 210 aa10.16□□□□□ -0.78
SDC1-202ENST00000381150 Q9H8V8 135 aa10.16□□□□□ -0.78
SDC1-202ENST00000381150 CDKN2A-AS1Q9UH64 79 aa10.16□□□□□ -0.78
SDC1-202ENST00000381150 IGHV1OR15-1A0A075B7D0 117 aa10.15□□□□□ -0.78
SDC1-202ENST00000381150 B4DSR2 109 aa10.15□□□□□ -0.78
SDC1-202ENST00000381150 MED14OSP0DP75 135 aa10.15□□□□□ -0.78
SDC1-202ENST00000381150 IGHV3OR16-12A0A075B7B8 117 aa10.15□□□□□ -0.78
SDC1-202ENST00000381150 DAZ2Q13117 558 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms