RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 FAM222AQ5U5X8 452 aa8.21□□□□□ -1.1
CLCN4-202ENST00000380833 TNRC6BQ9UPQ9 1833 aaKnown RBP8.21□□□□□ -1.1
CLCN4-202ENST00000380833 ADORA2A-AS1P86434 159 aa8.21□□□□□ -1.1
CLCN4-202ENST00000380833 MDFIQ99750 246 aa8.2□□□□□ -1.1
CLCN4-202ENST00000380833 LIMD2Q9BT23 127 aa8.2□□□□□ -1.1
CLCN4-202ENST00000380833 MYLKQ15746 1914 aa8.2□□□□□ -1.1
CLCN4-202ENST00000380833 GDF5OSQ5U4N7 250 aa8.2□□□□□ -1.1
CLCN4-202ENST00000380833 NEXN-AS1Q8NBZ9 246 aa8.2□□□□□ -1.1
CLCN4-202ENST00000380833 PCNX1Q96RV3 2341 aa8.2□□□□□ -1.1
CLCN4-202ENST00000380833 TRBV6-1A0A0K0K1D8 114 aa8.19□□□□□ -1.1
CLCN4-202ENST00000380833 DNAJC9-AS1A6NH13 148 aa8.19□□□□□ -1.1
CLCN4-202ENST00000380833 SPINK6Q6UWN8 80 aa8.19□□□□□ -1.1
CLCN4-202ENST00000380833 ZNF491Q8N8L2 437 aa8.19□□□□□ -1.1
CLCN4-202ENST00000380833 COX7BP24311 80 aa8.19□□□□□ -1.1
CLCN4-202ENST00000380833 Q8N9L7 120 aa8.19□□□□□ -1.1
CLCN4-202ENST00000380833 FAM30AQ9NZY2 134 aa8.19□□□□□ -1.1
CLCN4-202ENST00000380833 HEATR5AQ86XA9 2040 aa8.19□□□□□ -1.1
CLCN4-202ENST00000380833 A0A0G2JMZ2 1700 aa8.19□□□□□ -1.1
CLCN4-202ENST00000380833 LRRC37A2A6NM11 1700 aa8.19□□□□□ -1.1
CLCN4-202ENST00000380833 PIP4P1Q86T03 277 aa8.19□□□□□ -1.1
CLCN4-202ENST00000380833 Q8N6K4 173 aa8.19□□□□□ -1.1
CLCN4-202ENST00000380833 C19orf71A6NCJ1 209 aa8.19□□□□□ -1.1
CLCN4-202ENST00000380833 SLPIP03973 132 aa8.19□□□□□ -1.1
CLCN4-202ENST00000380833 IL17DQ8TAD2 202 aa8.19□□□□□ -1.1
CLCN4-202ENST00000380833 TNCP24821 2201 aa8.19□□□□□ -1.1
CLCN4-202ENST00000380833 A0A087WVE0 104 aa8.18□□□□□ -1.1
CLCN4-202ENST00000380833 IGFL3Q6UXB1 125 aa8.18□□□□□ -1.1
CLCN4-202ENST00000380833 TMEM263Q8WUH6 116 aaKnown RBP8.18□□□□□ -1.1
CLCN4-202ENST00000380833 SPTAN1Q13813 2472 aaKnown RBP8.18□□□□□ -1.1
CLCN4-202ENST00000380833 HELZP42694 1942 aaKnown RBP8.18□□□□□ -1.1
CLCN4-202ENST00000380833 ZNF22P17026 224 aaPredicted RBP8.18□□□□□ -1.1
CLCN4-202ENST00000380833 ZSWIM8A7E2V4 1837 aa8.18□□□□□ -1.1
CLCN4-202ENST00000380833 CCKP06307 115 aa8.18□□□□□ -1.1
CLCN4-202ENST00000380833 NDUFA1O15239 70 aa8.18□□□□□ -1.1
CLCN4-202ENST00000380833 IGHV4-30-4P0DP06 118 aa8.18□□□□□ -1.1
CLCN4-202ENST00000380833 IGHV4-31P0DP07 118 aa8.18□□□□□ -1.1
CLCN4-202ENST00000380833 ZNF524Q96C55 264 aa8.18□□□□□ -1.1
CLCN4-202ENST00000380833 WFDC10BQ8IUB3 73 aa8.17□□□□□ -1.1
CLCN4-202ENST00000380833 UBE2D4Q9Y2X8 147 aa8.17□□□□□ -1.1
CLCN4-202ENST00000380833 CEMP1Q6PRD7 247 aaPredicted RBP8.17□□□□□ -1.1
CLCN4-202ENST00000380833 CELA1Q9UNI1 258 aa8.17□□□□□ -1.1
CLCN4-202ENST00000380833 B9D2Q9BPU9 175 aa8.17□□□□□ -1.1
CLCN4-202ENST00000380833 IGKV1D-37A0A075B6S9 117 aa8.17□□□□□ -1.1
CLCN4-202ENST00000380833 KIAA1671Q9BY89 1806 aa8.17□□□□□ -1.1
CLCN4-202ENST00000380833 UBE2D1P51668 147 aa8.16□□□□□ -1.1
CLCN4-202ENST00000380833 TSC2P49815 1807 aa8.16□□□□□ -1.1
CLCN4-202ENST00000380833 C15orf65H3BRN8 121 aa8.16□□□□□ -1.1
CLCN4-202ENST00000380833 MYCNOSP40205 109 aa8.16□□□□□ -1.1
CLCN4-202ENST00000380833 FHL1Q13642 323 aa8.16□□□□□ -1.1
CLCN4-202ENST00000380833 FAM19A1Q7Z5A9 133 aa8.16□□□□□ -1.1
CLCN4-202ENST00000380833 ZNF706Q9Y5V0 76 aaPredicted RBP8.16□□□□□ -1.1
CLCN4-202ENST00000380833 CRYGDP07320 174 aa8.16□□□□□ -1.1
CLCN4-202ENST00000380833 WIPF1O43516 503 aa8.15□□□□□ -1.1
CLCN4-202ENST00000380833 IGHV7-81A0A0B4J1V7 117 aa8.15□□□□□ -1.1
CLCN4-202ENST00000380833 TRBV10-1A0A0K0K1A3 114 aa8.15□□□□□ -1.1
CLCN4-202ENST00000380833 LINC00269Q8N2A0 174 aa8.15□□□□□ -1.1
CLCN4-202ENST00000380833 MED14OSP0DP75 135 aa8.15□□□□□ -1.1
CLCN4-202ENST00000380833 LINC00308Q8TCZ7 52 aa8.15□□□□□ -1.1
CLCN4-202ENST00000380833 RALGAPA2Q2PPJ7 1873 aa8.15□□□□□ -1.11
CLCN4-202ENST00000380833 PRAC2D3DTV9 90 aa8.14□□□□□ -1.11
CLCN4-202ENST00000380833 FOXL2NBQ6ZUU3 175 aa8.14□□□□□ -1.11
CLCN4-202ENST00000380833 C19orf84I3L1E1 186 aa8.14□□□□□ -1.11
CLCN4-202ENST00000380833 EML6Q6ZMW3 1958 aa8.14□□□□□ -1.11
CLCN4-202ENST00000380833 WISP2O76076 250 aa8.14□□□□□ -1.11
CLCN4-202ENST00000380833 UBE2D3P61077 147 aa8.14□□□□□ -1.11
CLCN4-202ENST00000380833 UBE2D2P62837 147 aa8.14□□□□□ -1.11
CLCN4-202ENST00000380833 BEAN1Q3B7T3 259 aa8.14□□□□□ -1.11
CLCN4-202ENST00000380833 FAM167A-AS1Q96KT0 104 aa8.14□□□□□ -1.11
CLCN4-202ENST00000380833 SPAG11AQ6PDA7 123 aa8.13□□□□□ -1.11
CLCN4-202ENST00000380833 C1orf158Q8N1D5 194 aa8.13□□□□□ -1.11
CLCN4-202ENST00000380833 DEFB131BA0A096LNP1 70 aa8.13□□□□□ -1.11
CLCN4-202ENST00000380833 DCANP1Q8TF63 244 aa8.13□□□□□ -1.11
CLCN4-202ENST00000380833 NCKAP5O14513 1909 aa8.13□□□□□ -1.11
CLCN4-202ENST00000380833 IGLV2-8P01709 118 aa8.12□□□□□ -1.11
CLCN4-202ENST00000380833 C5orf56Q8N8D9 126 aa8.12□□□□□ -1.11
CLCN4-202ENST00000380833 C11orf1Q9H5F2 150 aa8.12□□□□□ -1.11
CLCN4-202ENST00000380833 TRBV10-3A0A0K0K1G6 114 aa8.12□□□□□ -1.11
CLCN4-202ENST00000380833 C20orf203Q8NBC4 194 aa8.12□□□□□ -1.11
CLCN4-202ENST00000380833 TMEM254Q8TBM7 123 aa8.12□□□□□ -1.11
CLCN4-202ENST00000380833 U3KQK5 164 aa8.12□□□□□ -1.11
CLCN4-202ENST00000380833 C22orf34Q6ZV56 151 aa8.12□□□□□ -1.11
CLCN4-202ENST00000380833 C8orf87E5RJ46 101 aa8.11□□□□□ -1.11
CLCN4-202ENST00000380833 IGLV1-44P01699 117 aa8.11□□□□□ -1.11
CLCN4-202ENST00000380833 H3BS24 57 aa8.11□□□□□ -1.11
CLCN4-202ENST00000380833 IGF1P05019 195 aa8.11□□□□□ -1.11
CLCN4-202ENST00000380833 C4orf3Q8WVX3 66 aa8.11□□□□□ -1.11
CLCN4-202ENST00000380833 UNQ9165/PRO28630Q6UXU0 137 aa8.11□□□□□ -1.11
CLCN4-202ENST00000380833 MED13LQ71F56 2210 aa8.11□□□□□ -1.11
CLCN4-202ENST00000380833 CREBBPQ92793 2442 aa8.1□□□□□ -1.11
CLCN4-202ENST00000380833 Q8N9W7 124 aa8.1□□□□□ -1.11
CLCN4-202ENST00000380833 RETNLBQ9BQ08 111 aa8.1□□□□□ -1.11
CLCN4-202ENST00000380833 SMR3AQ99954 134 aa8.1□□□□□ -1.11
CLCN4-202ENST00000380833 ADAMTS9Q9P2N4 1935 aa8.1□□□□□ -1.11
CLCN4-202ENST00000380833 CRIP2P52943 208 aaPredicted RBP8.1□□□□□ -1.11
CLCN4-202ENST00000380833 PATE2Q6UY27 113 aa8.09□□□□□ -1.11
CLCN4-202ENST00000380833 MED13Q9UHV7 2174 aa8.09□□□□□ -1.11
CLCN4-202ENST00000380833 DSCAML1Q8TD84 2053 aa8.09□□□□□ -1.11
CLCN4-202ENST00000380833 LY6G6DO95868 133 aa8.09□□□□□ -1.11
CLCN4-202ENST00000380833 HILS1P60008 231 aa8.09□□□□□ -1.11
CLCN4-202ENST00000380833 MBD6Q96DN6 1003 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms