RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 PDE6DO43924 150 aa10.78□□□□□ -0.68
SMN2-201ENST00000380741 NTF3P20783 257 aa10.78□□□□□ -0.68
SMN2-201ENST00000380741 MED9Q9NWA0 146 aa10.78□□□□□ -0.68
SMN2-201ENST00000380741 SULT1A2P50226 295 aa10.77□□□□□ -0.69
SMN2-201ENST00000380741 EIF5AL1Q6IS14 154 aaKnown RBP10.77□□□□□ -0.69
SMN2-201ENST00000380741 UBE2L6O14933 153 aa10.76□□□□□ -0.69
SMN2-201ENST00000380741 SLPIP03973 132 aa10.76□□□□□ -0.69
SMN2-201ENST00000380741 CTRLP40313 264 aa10.76□□□□□ -0.69
SMN2-201ENST00000380741 CIRBPQ14011 172 aaKnown RBP10.76□□□□□ -0.69
SMN2-201ENST00000380741 C9orf62Q8N4C0 152 aa10.76□□□□□ -0.69
SMN2-201ENST00000380741 BIN3Q9NQY0 253 aa10.76□□□□□ -0.69
SMN2-201ENST00000380741 BCL2P10415 239 aa10.75□□□□□ -0.69
SMN2-201ENST00000380741 AMTP48728 403 aa10.75□□□□□ -0.69
SMN2-201ENST00000380741 COTL1Q14019 142 aa10.75□□□□□ -0.69
SMN2-201ENST00000380741 NUDT10Q8NFP7 164 aa10.75□□□□□ -0.69
SMN2-201ENST00000380741 NUDT11Q96G61 164 aa10.75□□□□□ -0.69
SMN2-201ENST00000380741 AP5S1Q9NUS5 200 aa10.75□□□□□ -0.69
SMN2-201ENST00000380741 PLA2G2DQ9UNK4 145 aa10.75□□□□□ -0.69
SMN2-201ENST00000380741 IGHV3-64A0A075B6Q5 118 aa10.74□□□□□ -0.69
SMN2-201ENST00000380741 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.74□□□□□ -0.69
SMN2-201ENST00000380741 CHTF8P0CG12 524 aa10.74□□□□□ -0.69
SMN2-201ENST00000380741 TWIST1Q15672 202 aa10.74□□□□□ -0.69
SMN2-201ENST00000380741 WDR73Q6P4I2 378 aa10.74□□□□□ -0.69
SMN2-201ENST00000380741 CNFNQ9BYD5 112 aa10.74□□□□□ -0.69
SMN2-201ENST00000380741 TRAV26-2A0A0B4J265 109 aa10.73□□□□□ -0.69
SMN2-201ENST00000380741 GATD1Q8NB37 220 aa10.73□□□□□ -0.69
SMN2-201ENST00000380741 RNASE7Q9H1E1 156 aaKnown RBP10.72□□□□□ -0.69
SMN2-201ENST00000380741 RPP21Q9H633 154 aaKnown RBP10.72□□□□□ -0.69
SMN2-201ENST00000380741 A0A087WYN8 130 aa10.71□□□□□ -0.69
SMN2-201ENST00000380741 IGKV3OR2-268A0A0C4DH90 116 aa10.71□□□□□ -0.69
SMN2-201ENST00000380741 GAGE12HA6NDE8 117 aa10.71□□□□□ -0.69
SMN2-201ENST00000380741 K7EN84 100 aa10.71□□□□□ -0.69
SMN2-201ENST00000380741 C15orf56Q8N910 161 aa10.71□□□□□ -0.69
SMN2-201ENST00000380741 SPACA4Q8TDM5 124 aa10.71□□□□□ -0.69
SMN2-201ENST00000380741 DPH3Q96FX2 82 aa10.71□□□□□ -0.69
SMN2-201ENST00000380741 Q6ZNX1 250 aa10.7□□□□□ -0.7
SMN2-201ENST00000380741 RPL39LQ96EH5 51 aaKnown RBP10.7□□□□□ -0.7
SMN2-201ENST00000380741 RNF185Q96GF1 192 aa10.7□□□□□ -0.7
SMN2-201ENST00000380741 MT1HL1P0DM35 61 aa10.69□□□□□ -0.7
SMN2-201ENST00000380741 OCC1Q8TAD7 63 aa10.69□□□□□ -0.7
SMN2-201ENST00000380741 GTSF1Q8WW33 167 aa10.69□□□□□ -0.7
SMN2-201ENST00000380741 TNXBP22105 4242 aa10.69□□□□□ -0.7
SMN2-201ENST00000380741 TAGLN2P37802 199 aaKnown RBP10.68□□□□□ -0.7
SMN2-201ENST00000380741 FOXA3P55318 350 aaPredicted RBP10.68□□□□□ -0.7
SMN2-201ENST00000380741 CFAP161Q6P656 301 aa10.68□□□□□ -0.7
SMN2-201ENST00000380741 Q6ZRU5 148 aa10.68□□□□□ -0.7
SMN2-201ENST00000380741 SLC51BQ86UW2 128 aa10.68□□□□□ -0.7
SMN2-201ENST00000380741 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.67□□□□□ -0.7
SMN2-201ENST00000380741 IGKV2-29A2NJV5 120 aaPredicted RBP10.67□□□□□ -0.7
SMN2-201ENST00000380741 COX6A2Q02221 97 aa10.67□□□□□ -0.7
SMN2-201ENST00000380741 HIGD2BQ4VC39 106 aa10.67□□□□□ -0.7
SMN2-201ENST00000380741 AMMECR1LQ6DCA0 310 aa10.67□□□□□ -0.7
SMN2-201ENST00000380741 TCTE3Q8IZS6 198 aa10.67□□□□□ -0.7
SMN2-201ENST00000380741 CHCHD10Q8WYQ3 142 aaPredicted RBP10.67□□□□□ -0.7
SMN2-201ENST00000380741 PLAC8Q9NZF1 115 aa10.67□□□□□ -0.7
SMN2-201ENST00000380741 NCR2O95944 276 aa10.66□□□□□ -0.7
SMN2-201ENST00000380741 APCSP02743 223 aa10.66□□□□□ -0.7
SMN2-201ENST00000380741 RPS10P46783 165 aaKnown RBP10.66□□□□□ -0.7
SMN2-201ENST00000380741 RNASEKQ6P5S7 137 aaKnown RBP10.66□□□□□ -0.7
SMN2-201ENST00000380741 SDHAF1A6NFY7 115 aa10.65□□□□□ -0.7
SMN2-201ENST00000380741 PHOX2AO14813 284 aa10.65□□□□□ -0.7
SMN2-201ENST00000380741 FGF6P10767 208 aa10.65□□□□□ -0.7
SMN2-201ENST00000380741 SMIM15Q7Z3B0 74 aa10.65□□□□□ -0.7
SMN2-201ENST00000380741 GVQW2A0A096LPI5 108 aaPredicted RBP10.64□□□□□ -0.71
SMN2-201ENST00000380741 H7C423 109 aa10.64□□□□□ -0.71
SMN2-201ENST00000380741 NDUFS6O75380 124 aaKnown RBP10.64□□□□□ -0.71
SMN2-201ENST00000380741 TEX261Q6UWH6 196 aa10.64□□□□□ -0.71
SMN2-201ENST00000380741 PRSS3P2Q8NHM4 247 aa10.64□□□□□ -0.71
SMN2-201ENST00000380741 IGKV2-24A0A0C4DH68 120 aa10.63□□□□□ -0.71
SMN2-201ENST00000380741 GATCO43716 136 aaKnown RBP10.63□□□□□ -0.71
SMN2-201ENST00000380741 MAJINQ3KP22 176 aa10.63□□□□□ -0.71
SMN2-201ENST00000380741 C7orf33Q8WU49 177 aa10.63□□□□□ -0.71
SMN2-201ENST00000380741 FOXI1Q12951 378 aa10.62□□□□□ -0.71
SMN2-201ENST00000380741 FAM231BA6NCW3 169 aa10.61□□□□□ -0.71
SMN2-201ENST00000380741 TMEM250H0YL14 139 aa10.61□□□□□ -0.71
SMN2-201ENST00000380741 I3L3M4 83 aa10.61□□□□□ -0.71
SMN2-201ENST00000380741 ZNF25P17030 456 aaPredicted RBP10.61□□□□□ -0.71
SMN2-201ENST00000380741 FAM231DQ6ZW35 169 aa10.61□□□□□ -0.71
SMN2-201ENST00000380741 TRBV6-5A0A0K0K1A5 114 aa10.6□□□□□ -0.71
SMN2-201ENST00000380741 A8MWL6 223 aa10.6□□□□□ -0.71
SMN2-201ENST00000380741 GAS8-AS1O95177 125 aa10.6□□□□□ -0.71
SMN2-201ENST00000380741 PMCHP20382 165 aa10.6□□□□□ -0.71
SMN2-201ENST00000380741 XCL1P47992 114 aa10.6□□□□□ -0.71
SMN2-201ENST00000380741 OR5A1Q8NGJ0 315 aa10.6□□□□□ -0.71
SMN2-201ENST00000380741 A0A096LNI7 61 aa10.59□□□□□ -0.71
SMN2-201ENST00000380741 TSHBP01222 138 aa10.59□□□□□ -0.71
SMN2-201ENST00000380741 STPG4Q8N801 248 aa10.59□□□□□ -0.71
SMN2-201ENST00000380741 BTF3L4Q96K17 158 aa10.59□□□□□ -0.71
SMN2-201ENST00000380741 ESDP10768 282 aa10.58□□□□□ -0.72
SMN2-201ENST00000380741 CEBPGP53567 150 aa10.58□□□□□ -0.72
SMN2-201ENST00000380741 CT83Q5H943 113 aa10.58□□□□□ -0.72
SMN2-201ENST00000380741 ALKAL2Q6UX46 152 aa10.58□□□□□ -0.72
SMN2-201ENST00000380741 TMEM101Q96IK0 257 aa10.58□□□□□ -0.72
SMN2-201ENST00000380741 TMEM242Q9NWH2 141 aa10.58□□□□□ -0.72
SMN2-201ENST00000380741 LINC00959A0A1B0GUT2 108 aa10.57□□□□□ -0.72
SMN2-201ENST00000380741 CCL25O15444 150 aa10.57□□□□□ -0.72
SMN2-201ENST00000380741 PRR3P79522 188 aaKnown RBP10.57□□□□□ -0.72
SMN2-201ENST00000380741 LYPD6BQ8NI32 183 aa10.57□□□□□ -0.72
SMN2-201ENST00000380741 LINC00526Q96FQ7 95 aa10.57□□□□□ -0.72
SMN2-201ENST00000380741 ST20Q9HBF5 79 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms