RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 A4D1N5 150 aa13.27□□□□□ -0.29
UBL3-201ENST00000380680 C5orf38Q86SI9 138 aa13.27□□□□□ -0.29
UBL3-201ENST00000380680 C10orf126Q8N4M7 172 aa13.27□□□□□ -0.29
UBL3-201ENST00000380680 ESM1Q9NQ30 184 aa13.27□□□□□ -0.29
UBL3-201ENST00000380680 IGKV2D-26A0A0A0MRZ7 120 aa13.26□□□□□ -0.29
UBL3-201ENST00000380680 XCL1P47992 114 aa13.26□□□□□ -0.29
UBL3-201ENST00000380680 CFC1BP0CG36 223 aa13.26□□□□□ -0.29
UBL3-201ENST00000380680 CFC1P0CG37 223 aa13.26□□□□□ -0.29
UBL3-201ENST00000380680 DCANP1Q8TF63 244 aa13.26□□□□□ -0.29
UBL3-201ENST00000380680 GYPEP15421 78 aa13.26□□□□□ -0.29
UBL3-201ENST00000380680 DAZ2Q13117 558 aaKnown RBP13.26□□□□□ -0.29
UBL3-201ENST00000380680 C9orf66Q5T8R8 295 aa13.26□□□□□ -0.29
UBL3-201ENST00000380680 DAZ4Q86SG3 579 aaKnown RBP13.26□□□□□ -0.29
UBL3-201ENST00000380680 DAZ3Q9NR90 486 aaKnown RBP13.26□□□□□ -0.29
UBL3-201ENST00000380680 NRACQ8N912 160 aa13.25□□□□□ -0.29
UBL3-201ENST00000380680 CELSR3Q9NYQ7 3312 aa13.25□□□□□ -0.29
UBL3-201ENST00000380680 KLLNB2CW77 178 aa13.25□□□□□ -0.29
UBL3-201ENST00000380680 CNFNQ9BYD5 112 aa13.25□□□□□ -0.29
UBL3-201ENST00000380680 Q6ZTI0 123 aa13.24□□□□□ -0.29
UBL3-201ENST00000380680 MUSTN1Q8IVN3 82 aa13.24□□□□□ -0.29
UBL3-201ENST00000380680 TMEM263Q8WUH6 116 aaKnown RBP13.24□□□□□ -0.29
UBL3-201ENST00000380680 CRLF1O75462 422 aa13.23□□□□□ -0.29
UBL3-201ENST00000380680 ATP6V0E2Q8NHE4 81 aa13.23□□□□□ -0.29
UBL3-201ENST00000380680 Q8N976 141 aa13.23□□□□□ -0.29
UBL3-201ENST00000380680 NEXN-AS1Q8NBZ9 246 aa13.23□□□□□ -0.29
UBL3-201ENST00000380680 M0QY20 66 aa13.22□□□□□ -0.29
UBL3-201ENST00000380680 DEFB4AO15263 64 aa13.22□□□□□ -0.29
UBL3-201ENST00000380680 PRM2P04554 102 aa13.22□□□□□ -0.29
UBL3-201ENST00000380680 SH2D6Q7Z4S9 175 aa13.22□□□□□ -0.29
UBL3-201ENST00000380680 CRIP2P52943 208 aaPredicted RBP13.22□□□□□ -0.29
UBL3-201ENST00000380680 PROK1P58294 105 aa13.21□□□□□ -0.29
UBL3-201ENST00000380680 DEFB135Q30KP9 77 aa13.21□□□□□ -0.29
UBL3-201ENST00000380680 DAND5Q8N907 189 aa13.21□□□□□ -0.29
UBL3-201ENST00000380680 GAGE2BQ13066 116 aa13.21□□□□□ -0.29
UBL3-201ENST00000380680 GAGE2EQ4V326 116 aa13.21□□□□□ -0.29
UBL3-201ENST00000380680 PPDPFLQ8WWR9 84 aa13.21□□□□□ -0.29
UBL3-201ENST00000380680 GAGE2DQ9UEU5 116 aa13.21□□□□□ -0.29
UBL3-201ENST00000380680 AGRNO00468 2067 aa13.21□□□□□ -0.29
UBL3-201ENST00000380680 SLC25A29Q8N8R3 303 aa13.2□□□□□ -0.3
UBL3-201ENST00000380680 RNASE8Q8TDE3 154 aaKnown RBP13.2□□□□□ -0.3
UBL3-201ENST00000380680 Q6ZUT4 128 aa13.2□□□□□ -0.3
UBL3-201ENST00000380680 HHLA3Q9XRX5 114 aa13.2□□□□□ -0.3
UBL3-201ENST00000380680 IGHV4-4A0A075B6R2 117 aa13.19□□□□□ -0.3
UBL3-201ENST00000380680 TEX48A0A1B0GUV7 120 aa13.19□□□□□ -0.3
UBL3-201ENST00000380680 PRSS47A8MTI9 375 aa13.19□□□□□ -0.3
UBL3-201ENST00000380680 MAP1AP78559 2803 aaPredicted RBP13.19□□□□□ -0.3
UBL3-201ENST00000380680 IGHV3-30-3P0DP02 117 aa13.19□□□□□ -0.3
UBL3-201ENST00000380680 MAPKAPK5-AS1Q8N8E1 139 aa13.19□□□□□ -0.3
UBL3-201ENST00000380680 DSPP15924 2871 aaKnown RBP13.18□□□□□ -0.3
UBL3-201ENST00000380680 TRBV10-1A0A0K0K1A3 114 aa13.18□□□□□ -0.3
UBL3-201ENST00000380680 WFDC2Q14508 124 aa13.18□□□□□ -0.3
UBL3-201ENST00000380680 LINC01006Q8NI28 216 aa13.18□□□□□ -0.3
UBL3-201ENST00000380680 VSIG2Q96IQ7 327 aa13.18□□□□□ -0.3
UBL3-201ENST00000380680 IGLV10-54A0A075B6I4 117 aa13.18□□□□□ -0.3
UBL3-201ENST00000380680 ZNF561-AS1K7EIQ3 104 aa13.17□□□□□ -0.3
UBL3-201ENST00000380680 TRBV27A0A0K0K1C4 114 aa13.17□□□□□ -0.3
UBL3-201ENST00000380680 UBE2WQ96B02 151 aa13.17□□□□□ -0.3
UBL3-201ENST00000380680 COX8CQ7Z4L0 72 aa13.16□□□□□ -0.3
UBL3-201ENST00000380680 ATP5G1P05496 136 aa13.16□□□□□ -0.3
UBL3-201ENST00000380680 BBC3Q96PG8 261 aaPredicted RBP13.16□□□□□ -0.3
UBL3-201ENST00000380680 IGHV1-58A0A0C4DH39 117 aa13.15□□□□□ -0.3
UBL3-201ENST00000380680 NTN5Q8WTR8 489 aaPredicted RBP13.15□□□□□ -0.3
UBL3-201ENST00000380680 TRAV4A0A0B4J268 109 aa13.15□□□□□ -0.3
UBL3-201ENST00000380680 CRYGDP07320 174 aa13.15□□□□□ -0.3
UBL3-201ENST00000380680 ANAPC13Q9BS18 74 aa13.15□□□□□ -0.3
UBL3-201ENST00000380680 GHRHP01286 108 aa13.15□□□□□ -0.3
UBL3-201ENST00000380680 SPART-AS1P0CW21 52 aa13.15□□□□□ -0.3
UBL3-201ENST00000380680 IFITM1P13164 125 aa13.15□□□□□ -0.3
UBL3-201ENST00000380680 ZFAND6Q6FIF0 208 aa13.15□□□□□ -0.3
UBL3-201ENST00000380680 HECTD1Q9ULT8 2610 aa13.14□□□□□ -0.31
UBL3-201ENST00000380680 POLR2KP53803 58 aaKnown RBP13.14□□□□□ -0.31
UBL3-201ENST00000380680 CARD19Q96LW7 228 aa13.14□□□□□ -0.31
UBL3-201ENST00000380680 LINC00467Q9BRT7 94 aa13.14□□□□□ -0.31
UBL3-201ENST00000380680 IGLV4-3A0A075B6K6 122 aa13.14□□□□□ -0.31
UBL3-201ENST00000380680 CFAP126Q5VTH2 177 aa13.14□□□□□ -0.31
UBL3-201ENST00000380680 LAMTOR3Q9UHA4 124 aa13.14□□□□□ -0.31
UBL3-201ENST00000380680 INAFM1C9JVW0 142 aa13.13□□□□□ -0.31
UBL3-201ENST00000380680 C2orf91Q6ZV80 131 aa13.13□□□□□ -0.31
UBL3-201ENST00000380680 OVOL2Q9BRP0 275 aa13.13□□□□□ -0.31
UBL3-201ENST00000380680 TRAV13-2A0A0B4J235 113 aa13.13□□□□□ -0.31
UBL3-201ENST00000380680 HERV-K104P63124 156 aa13.13□□□□□ -0.31
UBL3-201ENST00000380680 TRBV6-5A0A0K0K1A5 114 aa13.13□□□□□ -0.31
UBL3-201ENST00000380680 GAGE12HA6NDE8 117 aa13.12□□□□□ -0.31
UBL3-201ENST00000380680 C9orf85Q96MD7 179 aa13.12□□□□□ -0.31
UBL3-201ENST00000380680 GAGE2AQ6NT46 116 aa13.12□□□□□ -0.31
UBL3-201ENST00000380680 WFDC10AQ9H1F0 79 aa13.12□□□□□ -0.31
UBL3-201ENST00000380680 MRPL23Q16540 153 aaKnown RBP13.12□□□□□ -0.31
UBL3-201ENST00000380680 CDKN2A-AS1Q9UH64 79 aa13.11□□□□□ -0.31
UBL3-201ENST00000380680 ZNF22P17026 224 aaPredicted RBP13.11□□□□□ -0.31
UBL3-201ENST00000380680 UBE2DNLQ8IWF7 75 aa13.11□□□□□ -0.31
UBL3-201ENST00000380680 INSL3P51460 131 aa13.11□□□□□ -0.31
UBL3-201ENST00000380680 TM2D2Q9BX73 214 aa13.11□□□□□ -0.31
UBL3-201ENST00000380680 PRO0255Q9UI72 69 aa13.1□□□□□ -0.31
UBL3-201ENST00000380680 A0A096LNJ9 63 aa13.1□□□□□ -0.31
UBL3-201ENST00000380680 BRI3O95415 125 aa13.1□□□□□ -0.31
UBL3-201ENST00000380680 SOCS3O14543 225 aa13.09□□□□□ -0.31
UBL3-201ENST00000380680 AKAP13Q12802 2813 aa13.09□□□□□ -0.31
UBL3-201ENST00000380680 NDUFA11Q86Y39 141 aa13.09□□□□□ -0.31
UBL3-201ENST00000380680 COX7B2Q8TF08 81 aa13.09□□□□□ -0.31
UBL3-201ENST00000380680 SND1-IT1Q9HBX3 110 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms