RNA–Protein interactions for RNA: ENST00000379892.4

DCLK1-203, Transcript of doublecortin like kinase 1, humanhuman

TSL 5 BASIC

Gene DCLK1, Length 2,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-203ENST00000379892 CEMP1Q6PRD7 247 aaPredicted RBP13.16□□□□□ -0.3
DCLK1-203ENST00000379892 IGHV3-64A0A075B6Q5 118 aa13.16□□□□□ -0.3
DCLK1-203ENST00000379892 TEX48A0A1B0GUV7 120 aa13.16□□□□□ -0.3
DCLK1-203ENST00000379892 A0A1W2PRX2 142 aa13.16□□□□□ -0.3
DCLK1-203ENST00000379892 ODF3L2Q3SX64 289 aa13.16□□□□□ -0.3
DCLK1-203ENST00000379892 SONP18583 2426 aaKnown RBP13.15□□□□□ -0.3
DCLK1-203ENST00000379892 APOMO95445 188 aa13.15□□□□□ -0.3
DCLK1-203ENST00000379892 ESM1Q9NQ30 184 aa13.15□□□□□ -0.3
DCLK1-203ENST00000379892 TSPAN13O95857 204 aa13.15□□□□□ -0.3
DCLK1-203ENST00000379892 XCL2Q9UBD3 114 aa13.15□□□□□ -0.3
DCLK1-203ENST00000379892 BEAN1Q3B7T3 259 aa13.14□□□□□ -0.31
DCLK1-203ENST00000379892 MTURNQ8N3F0 131 aa13.14□□□□□ -0.31
DCLK1-203ENST00000379892 CHCHD7Q9BUK0 85 aa13.14□□□□□ -0.31
DCLK1-203ENST00000379892 AZU1P20160 251 aa13.13□□□□□ -0.31
DCLK1-203ENST00000379892 NDUFA11Q86Y39 141 aa13.13□□□□□ -0.31
DCLK1-203ENST00000379892 SPXQ9BT56 116 aa13.13□□□□□ -0.31
DCLK1-203ENST00000379892 PRO0461Q9UI25 63 aa13.13□□□□□ -0.31
DCLK1-203ENST00000379892 NF1P21359 2839 aa13.13□□□□□ -0.31
DCLK1-203ENST00000379892 IGHV3-53P01767 116 aa13.13□□□□□ -0.31
DCLK1-203ENST00000379892 FHL3Q13643 280 aa13.13□□□□□ -0.31
DCLK1-203ENST00000379892 RNASE13Q5GAN3 156 aaKnown RBP13.13□□□□□ -0.31
DCLK1-203ENST00000379892 HIST2H2BCQ6DN03 193 aa13.13□□□□□ -0.31
DCLK1-203ENST00000379892 CFC1BP0CG36 223 aa13.12□□□□□ -0.31
DCLK1-203ENST00000379892 CFC1P0CG37 223 aa13.12□□□□□ -0.31
DCLK1-203ENST00000379892 GAGE13Q4V321 117 aa13.12□□□□□ -0.31
DCLK1-203ENST00000379892 CLUHP3Q96NS8 147 aa13.12□□□□□ -0.31
DCLK1-203ENST00000379892 CUBNO60494 3623 aa13.12□□□□□ -0.31
DCLK1-203ENST00000379892 RS1O15537 224 aa13.12□□□□□ -0.31
DCLK1-203ENST00000379892 MRPS36P82909 103 aaKnown RBP13.12□□□□□ -0.31
DCLK1-203ENST00000379892 SFTA2Q6UW10 78 aa13.12□□□□□ -0.31
DCLK1-203ENST00000379892 TRAV25A0A0B4J276 109 aa13.11□□□□□ -0.31
DCLK1-203ENST00000379892 IGHV3-38A0A0C4DH36 116 aa13.11□□□□□ -0.31
DCLK1-203ENST00000379892 CCL24O00175 119 aa13.11□□□□□ -0.31
DCLK1-203ENST00000379892 TEX29Q8N6K0 151 aa13.11□□□□□ -0.31
DCLK1-203ENST00000379892 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.1□□□□□ -0.31
DCLK1-203ENST00000379892 IGKV2-29A2NJV5 120 aaPredicted RBP13.1□□□□□ -0.31
DCLK1-203ENST00000379892 CRYBA4P53673 196 aa13.1□□□□□ -0.31
DCLK1-203ENST00000379892 STHQ8IWL8 128 aa13.1□□□□□ -0.31
DCLK1-203ENST00000379892 C1orf158Q8N1D5 194 aa13.1□□□□□ -0.31
DCLK1-203ENST00000379892 UBE2D4Q9Y2X8 147 aa13.1□□□□□ -0.31
DCLK1-203ENST00000379892 SH2D6Q7Z4S9 175 aa13.1□□□□□ -0.31
DCLK1-203ENST00000379892 C10orf126Q8N4M7 172 aa13.1□□□□□ -0.31
DCLK1-203ENST00000379892 IGHV3OR16-12A0A075B7B8 117 aa13.09□□□□□ -0.31
DCLK1-203ENST00000379892 DNAJC30Q96LL9 226 aa13.09□□□□□ -0.31
DCLK1-203ENST00000379892 FLNAP21333 2647 aaKnown RBP13.09□□□□□ -0.31
DCLK1-203ENST00000379892 TENM4Q6N022 2769 aa13.09□□□□□ -0.31
DCLK1-203ENST00000379892 LOC107984156A0A0G2JMH3 177 aa13.09□□□□□ -0.31
DCLK1-203ENST00000379892 IGHV3-30-3P0DP02 117 aa13.09□□□□□ -0.31
DCLK1-203ENST00000379892 UBE2D3P61077 147 aa13.09□□□□□ -0.31
DCLK1-203ENST00000379892 UBE2D2P62837 147 aa13.09□□□□□ -0.31
DCLK1-203ENST00000379892 ETDBQ3ZM63 59 aa13.09□□□□□ -0.31
DCLK1-203ENST00000379892 ARL17AQ8IVW1 177 aa13.09□□□□□ -0.31
DCLK1-203ENST00000379892 SPANXA1Q9NS26 97 aa13.09□□□□□ -0.31
DCLK1-203ENST00000379892 CITED2Q99967 270 aaPredicted RBP13.08□□□□□ -0.32
DCLK1-203ENST00000379892 TIMM21Q9BVV7 248 aa13.07□□□□□ -0.32
DCLK1-203ENST00000379892 TRAV8-3A0A0A6YYJ7 113 aa13.07□□□□□ -0.32
DCLK1-203ENST00000379892 COTL1Q14019 142 aa13.07□□□□□ -0.32
DCLK1-203ENST00000379892 Q6ZUT4 128 aa13.07□□□□□ -0.32
DCLK1-203ENST00000379892 IL17DQ8TAD2 202 aa13.07□□□□□ -0.32
DCLK1-203ENST00000379892 CCDC168Q8NDH2 2452 aa13.07□□□□□ -0.32
DCLK1-203ENST00000379892 A4D1N5 150 aa13.06□□□□□ -0.32
DCLK1-203ENST00000379892 ADARB2-AS1A8MUL3 147 aa13.06□□□□□ -0.32
DCLK1-203ENST00000379892 EIF4EBP3O60516 100 aaPredicted RBP13.06□□□□□ -0.32
DCLK1-203ENST00000379892 PSMB2P49721 201 aa13.06□□□□□ -0.32
DCLK1-203ENST00000379892 WNK1Q9H4A3 2382 aa13.06□□□□□ -0.32
DCLK1-203ENST00000379892 A0A0J9YXY3 114 aa13.06□□□□□ -0.32
DCLK1-203ENST00000379892 KRTAP1-1Q07627 177 aa13.06□□□□□ -0.32
DCLK1-203ENST00000379892 TINCRA0A1B0GVN0 87 aa13.05□□□□□ -0.32
DCLK1-203ENST00000379892 MUSTN1Q8IVN3 82 aa13.05□□□□□ -0.32
DCLK1-203ENST00000379892 PRO1854Q9UHT4 67 aa13.05□□□□□ -0.32
DCLK1-203ENST00000379892 TRGV1A0A0A0MS02 117 aa13.04□□□□□ -0.32
DCLK1-203ENST00000379892 IGHV1-58A0A0C4DH39 117 aa13.04□□□□□ -0.32
DCLK1-203ENST00000379892 TMEM238C9JI98 176 aa13.04□□□□□ -0.32
DCLK1-203ENST00000379892 SMCPP49901 116 aaPredicted RBP13.04□□□□□ -0.32
DCLK1-203ENST00000379892 ANK3Q12955 4377 aaKnown RBP13.03□□□□□ -0.32
DCLK1-203ENST00000379892 LINC01006Q8NI28 216 aa13.03□□□□□ -0.32
DCLK1-203ENST00000379892 TSSC4Q9Y5U2 329 aaPredicted RBP13.03□□□□□ -0.32
DCLK1-203ENST00000379892 NIPBLQ6KC79 2804 aaeCLIP13.03□□□□□ -0.32
DCLK1-203ENST00000379892 PDZD2O15018 2839 aa13.03□□□□□ -0.32
DCLK1-203ENST00000379892 SPINK8P0C7L1 97 aa13.02□□□□□ -0.33
DCLK1-203ENST00000379892 TMEM263Q8WUH6 116 aaKnown RBP13.02□□□□□ -0.33
DCLK1-203ENST00000379892 VSIG2Q96IQ7 327 aa13.02□□□□□ -0.33
DCLK1-203ENST00000379892 LITAFQ99732 161 aa13.02□□□□□ -0.33
DCLK1-203ENST00000379892 A8MZ25 164 aa13.01□□□□□ -0.33
DCLK1-203ENST00000379892 TCL1BO95988 128 aa13.01□□□□□ -0.33
DCLK1-203ENST00000379892 LYRM7Q5U5X0 104 aa13.01□□□□□ -0.33
DCLK1-203ENST00000379892 Q6ZTI0 123 aa13.01□□□□□ -0.33
DCLK1-203ENST00000379892 YAE1D1Q9NRH1 226 aa13.01□□□□□ -0.33
DCLK1-203ENST00000379892 INSL3P51460 131 aa13□□□□□ -0.33
DCLK1-203ENST00000379892 NDUFA12Q9UI09 145 aa13□□□□□ -0.33
DCLK1-203ENST00000379892 A0A0B4J2C4 111 aa13□□□□□ -0.33
DCLK1-203ENST00000379892 IGHV3-33P01772 117 aa13□□□□□ -0.33
DCLK1-203ENST00000379892 GIG44P09565 113 aaPredicted RBP13□□□□□ -0.33
DCLK1-203ENST00000379892 RNASE1P07998 156 aaKnown RBP12.99□□□□□ -0.33
DCLK1-203ENST00000379892 ZNF418Q8TF45 676 aaPredicted RBP12.99□□□□□ -0.33
DCLK1-203ENST00000379892 C16orf95Q9H693 158 aa12.99□□□□□ -0.33
DCLK1-203ENST00000379892 GEMIN7Q9H840 131 aaKnown RBP12.99□□□□□ -0.33
DCLK1-203ENST00000379892 J3QR89 54 aa12.98□□□□□ -0.33
DCLK1-203ENST00000379892 WFDC10AQ9H1F0 79 aa12.98□□□□□ -0.33
DCLK1-203ENST00000379892 SETD2Q9BYW2 2564 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms