RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 LINC00574Q9H8X3 128 aa6.29□□□□□ -1.4
NHLRC3-201ENST00000379599 MSMPQ1L6U9 139 aa6.28□□□□□ -1.4
NHLRC3-201ENST00000379599 POLR2KP53803 58 aaKnown RBP6.28□□□□□ -1.4
NHLRC3-201ENST00000379599 RPL11P62913 178 aaKnown RBP6.28□□□□□ -1.4
NHLRC3-201ENST00000379599 C9orf47Q6ZRZ4 202 aa6.28□□□□□ -1.4
NHLRC3-201ENST00000379599 SOCS3O14543 225 aa6.28□□□□□ -1.4
NHLRC3-201ENST00000379599 GNRH2O43555 120 aa6.28□□□□□ -1.4
NHLRC3-201ENST00000379599 BEAN1Q3B7T3 259 aa6.28□□□□□ -1.4
NHLRC3-201ENST00000379599 PRR9Q5T870 116 aa6.28□□□□□ -1.4
NHLRC3-201ENST00000379599 SUMO4Q6EEV6 95 aa6.28□□□□□ -1.4
NHLRC3-201ENST00000379599 IGHV1-58A0A0C4DH39 117 aa6.27□□□□□ -1.41
NHLRC3-201ENST00000379599 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.27□□□□□ -1.41
NHLRC3-201ENST00000379599 IGFL2Q6UWQ7 119 aa6.27□□□□□ -1.41
NHLRC3-201ENST00000379599 ZFAND3Q9H8U3 227 aa6.27□□□□□ -1.41
NHLRC3-201ENST00000379599 RAI1Q7Z5J4 1906 aaPredicted RBP6.27□□□□□ -1.41
NHLRC3-201ENST00000379599 NCR3O14931 201 aa6.27□□□□□ -1.41
NHLRC3-201ENST00000379599 IGHV1-69P01742 117 aa6.27□□□□□ -1.41
NHLRC3-201ENST00000379599 IGKV3-15P01624 115 aa6.26□□□□□ -1.41
NHLRC3-201ENST00000379599 CD28P10747 220 aa6.26□□□□□ -1.41
NHLRC3-201ENST00000379599 LINC00308Q8TCZ7 52 aa6.26□□□□□ -1.41
NHLRC3-201ENST00000379599 CCL4P13236 92 aa6.26□□□□□ -1.41
NHLRC3-201ENST00000379599 IGLV4-3A0A075B6K6 122 aa6.25□□□□□ -1.41
NHLRC3-201ENST00000379599 RNASE4P34096 147 aaKnown RBP6.25□□□□□ -1.41
NHLRC3-201ENST00000379599 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.25□□□□□ -1.41
NHLRC3-201ENST00000379599 VMO1Q7Z5L0 202 aa6.25□□□□□ -1.41
NHLRC3-201ENST00000379599 ZFHX2Q9C0A1 2572 aaPredicted RBP6.25□□□□□ -1.41
NHLRC3-201ENST00000379599 DSPP15924 2871 aaKnown RBP6.25□□□□□ -1.41
NHLRC3-201ENST00000379599 IGHV1-18A0A0C4DH31 117 aa6.25□□□□□ -1.41
NHLRC3-201ENST00000379599 PAX4O43316 350 aa6.25□□□□□ -1.41
NHLRC3-201ENST00000379599 SAA4P35542 130 aa6.25□□□□□ -1.41
NHLRC3-201ENST00000379599 TRAV21A0A0B4J279 112 aa6.24□□□□□ -1.41
NHLRC3-201ENST00000379599 CLPSL1A2RUU4 121 aa6.24□□□□□ -1.41
NHLRC3-201ENST00000379599 CD164Q04900 197 aa6.24□□□□□ -1.41
NHLRC3-201ENST00000379599 DEFB123Q8N688 67 aa6.24□□□□□ -1.41
NHLRC3-201ENST00000379599 LY6G5BQ8NDX9 201 aa6.24□□□□□ -1.41
NHLRC3-201ENST00000379599 ABCA4P78363 2273 aa6.24□□□□□ -1.41
NHLRC3-201ENST00000379599 LAMA5O15230 3695 aa6.24□□□□□ -1.41
NHLRC3-201ENST00000379599 TRAV7A0A075B6U4 112 aa6.24□□□□□ -1.41
NHLRC3-201ENST00000379599 ZNF561-AS1K7EIQ3 104 aa6.24□□□□□ -1.41
NHLRC3-201ENST00000379599 C10orf142B7Z368 130 aa6.24□□□□□ -1.41
NHLRC3-201ENST00000379599 M0R1B8 84 aa6.24□□□□□ -1.41
NHLRC3-201ENST00000379599 IGHV4OR15-8A0A075B7B6 117 aa6.23□□□□□ -1.41
NHLRC3-201ENST00000379599 A0A087WW49 117 aa6.23□□□□□ -1.41
NHLRC3-201ENST00000379599 PATE3B3GLJ2 98 aa6.23□□□□□ -1.41
NHLRC3-201ENST00000379599 COX7A1P24310 79 aa6.23□□□□□ -1.41
NHLRC3-201ENST00000379599 C20orf203Q8NBC4 194 aa6.23□□□□□ -1.41
NHLRC3-201ENST00000379599 IGHV1-3A0A0C4DH29 117 aa6.23□□□□□ -1.41
NHLRC3-201ENST00000379599 FAM229BQ4G0N7 80 aa6.23□□□□□ -1.41
NHLRC3-201ENST00000379599 MRPL55Q7Z7F7 128 aaKnown RBP6.23□□□□□ -1.41
NHLRC3-201ENST00000379599 LOC400499M0QZD8 3231 aa6.23□□□□□ -1.41
NHLRC3-201ENST00000379599 CUL9Q8IWT3 2517 aa6.23□□□□□ -1.41
NHLRC3-201ENST00000379599 A0A087WZ39 114 aa6.23□□□□□ -1.41
NHLRC3-201ENST00000379599 NDUFB3O43676 98 aa6.23□□□□□ -1.41
NHLRC3-201ENST00000379599 DEFB1P60022 68 aa6.23□□□□□ -1.41
NHLRC3-201ENST00000379599 BLCAPP62952 87 aa6.23□□□□□ -1.41
NHLRC3-201ENST00000379599 PIK3CD-AS1Q5SR53 167 aa6.23□□□□□ -1.41
NHLRC3-201ENST00000379599 APRG1Q8IVJ8 170 aa6.23□□□□□ -1.41
NHLRC3-201ENST00000379599 SLPIP03973 132 aa6.22□□□□□ -1.41
NHLRC3-201ENST00000379599 CTSGP08311 255 aa6.22□□□□□ -1.41
NHLRC3-201ENST00000379599 DAD1P61803 113 aa6.22□□□□□ -1.41
NHLRC3-201ENST00000379599 A0A087WYN8 130 aa6.22□□□□□ -1.41
NHLRC3-201ENST00000379599 PRSS33Q8NF86 280 aa6.22□□□□□ -1.41
NHLRC3-201ENST00000379599 DCHS1Q96JQ0 3298 aa6.22□□□□□ -1.41
NHLRC3-201ENST00000379599 SORL1Q92673 2214 aa6.22□□□□□ -1.41
NHLRC3-201ENST00000379599 CACNA1BQ00975 2339 aa6.21□□□□□ -1.41
NHLRC3-201ENST00000379599 F8W735 103 aaPredicted RBP6.21□□□□□ -1.41
NHLRC3-201ENST00000379599 LINC00315P59091 139 aa6.21□□□□□ -1.41
NHLRC3-201ENST00000379599 KLKP1Q107X0 134 aa6.21□□□□□ -1.41
NHLRC3-201ENST00000379599 Q9H8V8 135 aa6.21□□□□□ -1.41
NHLRC3-201ENST00000379599 KALRNO60229 2985 aa6.21□□□□□ -1.42
NHLRC3-201ENST00000379599 IGHV1-46P01743 117 aa6.21□□□□□ -1.42
NHLRC3-201ENST00000379599 RNASE3P12724 160 aaKnown RBP6.21□□□□□ -1.42
NHLRC3-201ENST00000379599 BOD1L1Q8NFC6 3051 aa6.21□□□□□ -1.42
NHLRC3-201ENST00000379599 PRB1P04280 392 aa6.21□□□□□ -1.42
NHLRC3-201ENST00000379599 IGHV1-8P0DP01 117 aa6.21□□□□□ -1.42
NHLRC3-201ENST00000379599 C4orf48Q5BLP8 95 aa6.21□□□□□ -1.42
NHLRC3-201ENST00000379599 HIST2H2BCQ6DN03 193 aa6.21□□□□□ -1.42
NHLRC3-201ENST00000379599 HIST2H2BDQ6DRA6 164 aa6.21□□□□□ -1.42
NHLRC3-201ENST00000379599 LYPD2Q6UXB3 125 aa6.21□□□□□ -1.42
NHLRC3-201ENST00000379599 FAM110DQ8TAY7 271 aaPredicted RBP6.21□□□□□ -1.42
NHLRC3-201ENST00000379599 KIF25-AS1Q9Y6Z4 181 aa6.21□□□□□ -1.42
NHLRC3-201ENST00000379599 LECT2O14960 151 aa6.2□□□□□ -1.42
NHLRC3-201ENST00000379599 C15orf32Q32M92 178 aa6.2□□□□□ -1.42
NHLRC3-201ENST00000379599 SPRR3Q9UBC9 169 aa6.2□□□□□ -1.42
NHLRC3-201ENST00000379599 PLAC8L1A1L4L8 177 aa6.2□□□□□ -1.42
NHLRC3-201ENST00000379599 ATP5EP2Q5VTU8 51 aa6.2□□□□□ -1.42
NHLRC3-201ENST00000379599 UBL5Q9BZL1 73 aa6.2□□□□□ -1.42
NHLRC3-201ENST00000379599 IGLV11-55A0A075B6I3 123 aa6.19□□□□□ -1.42
NHLRC3-201ENST00000379599 MIR7-3HGQ8N6C7 128 aa6.19□□□□□ -1.42
NHLRC3-201ENST00000379599 CCL17Q92583 94 aa6.19□□□□□ -1.42
NHLRC3-201ENST00000379599 CRPP02741 224 aa6.19□□□□□ -1.42
NHLRC3-201ENST00000379599 PRR15Q8IV56 129 aa6.19□□□□□ -1.42
NHLRC3-201ENST00000379599 ZFAND2AQ8N6M9 145 aa6.19□□□□□ -1.42
NHLRC3-201ENST00000379599 MUC4Q99102 2169 aa6.19□□□□□ -1.42
NHLRC3-201ENST00000379599 TRAV13-2A0A0B4J235 113 aa6.19□□□□□ -1.42
NHLRC3-201ENST00000379599 TRAV10A0A0B4J240 114 aa6.19□□□□□ -1.42
NHLRC3-201ENST00000379599 PKDREJQ9NTG1 2253 aa6.18□□□□□ -1.42
NHLRC3-201ENST00000379599 RNASE1P07998 156 aaKnown RBP6.18□□□□□ -1.42
NHLRC3-201ENST00000379599 CFHR3Q02985 330 aa6.18□□□□□ -1.42
NHLRC3-201ENST00000379599 OVOL2Q9BRP0 275 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms