RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 C1QTNF4Q9BXJ3 329 aa5.36□□□□□ -1.55
GPCPD1-201ENST00000379019 MAP1LC3AQ9H492 121 aa5.36□□□□□ -1.55
GPCPD1-201ENST00000379019 FAM19A4Q96LR4 140 aa5.36□□□□□ -1.55
GPCPD1-201ENST00000379019 FABP5P3A8MUU1 101 aa5.36□□□□□ -1.55
GPCPD1-201ENST00000379019 A4D1N5 150 aa5.36□□□□□ -1.55
GPCPD1-201ENST00000379019 KPRPQ5T749 579 aaPredicted RBP5.36□□□□□ -1.55
GPCPD1-201ENST00000379019 ZNF815PA8K554 130 aa5.35□□□□□ -1.55
GPCPD1-201ENST00000379019 SBSPONQ8IVN8 264 aa5.35□□□□□ -1.55
GPCPD1-201ENST00000379019 IGHV3-73A0A0B4J1V6 119 aa5.35□□□□□ -1.55
GPCPD1-201ENST00000379019 C19orf54Q5BKX5 351 aa5.35□□□□□ -1.55
GPCPD1-201ENST00000379019 C18orf65Q6ZTR6 163 aa5.35□□□□□ -1.55
GPCPD1-201ENST00000379019 CLEC2BQ92478 149 aa5.35□□□□□ -1.55
GPCPD1-201ENST00000379019 SUMO2P61956 95 aaKnown RBP5.35□□□□□ -1.55
GPCPD1-201ENST00000379019 KLK9Q2XQG4 91 aa5.35□□□□□ -1.55
GPCPD1-201ENST00000379019 MRPL16Q9NX20 251 aaKnown RBP5.35□□□□□ -1.55
GPCPD1-201ENST00000379019 TP53TG1Q9Y2A0 90 aa5.35□□□□□ -1.55
GPCPD1-201ENST00000379019 U3KQE9 123 aa5.35□□□□□ -1.55
GPCPD1-201ENST00000379019 LYPD1Q8N2G4 141 aa5.34□□□□□ -1.55
GPCPD1-201ENST00000379019 DUX3Q96PT4 197 aa5.34□□□□□ -1.55
GPCPD1-201ENST00000379019 PDE6HQ13956 83 aa5.34□□□□□ -1.55
GPCPD1-201ENST00000379019 WIPF1O43516 503 aa5.34□□□□□ -1.56
GPCPD1-201ENST00000379019 TRIAP1O43715 76 aa5.34□□□□□ -1.56
GPCPD1-201ENST00000379019 POLR2KP53803 58 aaKnown RBP5.34□□□□□ -1.56
GPCPD1-201ENST00000379019 WFDC9Q8NEX5 89 aa5.34□□□□□ -1.56
GPCPD1-201ENST00000379019 TMEM263Q8WUH6 116 aaKnown RBP5.34□□□□□ -1.56
GPCPD1-201ENST00000379019 IGHV4-4A0A075B6R2 117 aa5.33□□□□□ -1.56
GPCPD1-201ENST00000379019 A0A0J9YXV3 536 aa5.33□□□□□ -1.56
GPCPD1-201ENST00000379019 SUMO4Q6EEV6 95 aa5.33□□□□□ -1.56
GPCPD1-201ENST00000379019 DLX4Q92988 240 aaPredicted RBP5.33□□□□□ -1.56
GPCPD1-201ENST00000379019 EEF1AKMT3Q96AZ1 226 aa5.33□□□□□ -1.56
GPCPD1-201ENST00000379019 DUX5Q96PT3 197 aa5.33□□□□□ -1.56
GPCPD1-201ENST00000379019 C4orf3Q8WVX3 66 aa5.33□□□□□ -1.56
GPCPD1-201ENST00000379019 RNASE4P34096 147 aaKnown RBP5.33□□□□□ -1.56
GPCPD1-201ENST00000379019 MUSTN1Q8IVN3 82 aa5.33□□□□□ -1.56
GPCPD1-201ENST00000379019 SCGB3A1Q96QR1 104 aa5.33□□□□□ -1.56
GPCPD1-201ENST00000379019 IGHV3-33P01772 117 aa5.32□□□□□ -1.56
GPCPD1-201ENST00000379019 CFHR3Q02985 330 aa5.32□□□□□ -1.56
GPCPD1-201ENST00000379019 LY6EQ16553 131 aa5.32□□□□□ -1.56
GPCPD1-201ENST00000379019 TTC32Q5I0X7 151 aa5.32□□□□□ -1.56
GPCPD1-201ENST00000379019 SOSTDC1Q6X4U4 206 aa5.32□□□□□ -1.56
GPCPD1-201ENST00000379019 USMG5Q96IX5 58 aa5.32□□□□□ -1.56
GPCPD1-201ENST00000379019 AP1S3Q96PC3 154 aa5.32□□□□□ -1.56
GPCPD1-201ENST00000379019 AAMDCQ9H7C9 122 aa5.32□□□□□ -1.56
GPCPD1-201ENST00000379019 UBE2E2Q96LR5 201 aa5.32□□□□□ -1.56
GPCPD1-201ENST00000379019 FAM218AQ96MZ4 157 aa5.32□□□□□ -1.56
GPCPD1-201ENST00000379019 DNAH1Q9P2D7 4330 aa5.32□□□□□ -1.56
GPCPD1-201ENST00000379019 MGPP08493 103 aa5.32□□□□□ -1.56
GPCPD1-201ENST00000379019 ERG28Q9UKR5 140 aa5.32□□□□□ -1.56
GPCPD1-201ENST00000379019 COX6A2Q02221 97 aa5.32□□□□□ -1.56
GPCPD1-201ENST00000379019 FAM223BA6NKX1 122 aa5.31□□□□□ -1.56
GPCPD1-201ENST00000379019 SPANXN1Q5VSR9 72 aa5.31□□□□□ -1.56
GPCPD1-201ENST00000379019 FAM223AQ8IWN6 122 aa5.31□□□□□ -1.56
GPCPD1-201ENST00000379019 POM121L12Q8N7R1 296 aa5.31□□□□□ -1.56
GPCPD1-201ENST00000379019 CHCHD5Q9BSY4 110 aa5.31□□□□□ -1.56
GPCPD1-201ENST00000379019 KNCNA6PVL3 124 aa5.31□□□□□ -1.56
GPCPD1-201ENST00000379019 OXTP01178 125 aa5.31□□□□□ -1.56
GPCPD1-201ENST00000379019 FAM74A4Q5TZK3 123 aa5.31□□□□□ -1.56
GPCPD1-201ENST00000379019 NTN5Q8WTR8 489 aaPredicted RBP5.31□□□□□ -1.56
GPCPD1-201ENST00000379019 ZNF256Q9Y2P7 627 aaPredicted RBP5.31□□□□□ -1.56
GPCPD1-201ENST00000379019 C9JAW5 83 aa5.31□□□□□ -1.56
GPCPD1-201ENST00000379019 VPREB1P12018 145 aa5.31□□□□□ -1.56
GPCPD1-201ENST00000379019 TCTEX1D4Q5JR98 221 aa5.31□□□□□ -1.56
GPCPD1-201ENST00000379019 KHDC1LQ5JSQ8 128 aa5.31□□□□□ -1.56
GPCPD1-201ENST00000379019 SLC25A29Q8N8R3 303 aa5.31□□□□□ -1.56
GPCPD1-201ENST00000379019 NXT2Q9NPJ8 142 aaKnown RBP5.31□□□□□ -1.56
GPCPD1-201ENST00000379019 LOC107984640A0A0U1RRK4 108 aa5.31□□□□□ -1.56
GPCPD1-201ENST00000379019 TRAV12-3A0A0B4J271 114 aa5.3□□□□□ -1.56
GPCPD1-201ENST00000379019 IGLV1-40P01703 118 aa5.3□□□□□ -1.56
GPCPD1-201ENST00000379019 PPDPFQ9H3Y8 114 aa5.3□□□□□ -1.56
GPCPD1-201ENST00000379019 A0A0U1RRA0 63 aa5.3□□□□□ -1.56
GPCPD1-201ENST00000379019 RS1O15537 224 aa5.3□□□□□ -1.56
GPCPD1-201ENST00000379019 TRAV41A0A0B4J266 112 aa5.3□□□□□ -1.56
GPCPD1-201ENST00000379019 RBMY1BA6NDE4 496 aaKnown RBP5.3□□□□□ -1.56
GPCPD1-201ENST00000379019 RBMY1EA6NEQ0 496 aaKnown RBP5.3□□□□□ -1.56
GPCPD1-201ENST00000379019 H7C423 109 aa5.3□□□□□ -1.56
GPCPD1-201ENST00000379019 RBMY1DP0C7P1 496 aaKnown RBP5.3□□□□□ -1.56
GPCPD1-201ENST00000379019 ZNF876PQ49A33 203 aa5.3□□□□□ -1.56
GPCPD1-201ENST00000379019 C9orf66Q5T8R8 295 aa5.3□□□□□ -1.56
GPCPD1-201ENST00000379019 FAM159AQ6UWV7 190 aa5.3□□□□□ -1.56
GPCPD1-201ENST00000379019 TEN1Q86WV5 123 aa5.3□□□□□ -1.56
GPCPD1-201ENST00000379019 DCANP1Q8TF63 244 aa5.3□□□□□ -1.56
GPCPD1-201ENST00000379019 BMI1P35226 326 aa5.3□□□□□ -1.56
GPCPD1-201ENST00000379019 FAM110DQ8TAY7 271 aaPredicted RBP5.3□□□□□ -1.56
GPCPD1-201ENST00000379019 DMBT1Q9UGM3 2413 aaPredicted RBP5.3□□□□□ -1.56
GPCPD1-201ENST00000379019 TRAV8-4A0A0B4J246 113 aa5.29□□□□□ -1.56
GPCPD1-201ENST00000379019 MRAP2Q96G30 205 aa5.29□□□□□ -1.56
GPCPD1-201ENST00000379019 RPL7P18124 248 aaKnown RBP5.29□□□□□ -1.56
GPCPD1-201ENST00000379019 IGHV3-38A0A0C4DH36 116 aa5.29□□□□□ -1.56
GPCPD1-201ENST00000379019 LINC00694P0DN24 101 aa5.29□□□□□ -1.56
GPCPD1-201ENST00000379019 NSD1Q96L73 2696 aaPredicted RBP5.29□□□□□ -1.56
GPCPD1-201ENST00000379019 OR11H12B2RN74 326 aa5.28□□□□□ -1.56
GPCPD1-201ENST00000379019 M0QY20 66 aa5.28□□□□□ -1.56
GPCPD1-201ENST00000379019 PSMB8P28062 276 aa5.28□□□□□ -1.56
GPCPD1-201ENST00000379019 OR11H1Q8NG94 326 aa5.28□□□□□ -1.56
GPCPD1-201ENST00000379019 OR11H2Q8NH07 326 aa5.28□□□□□ -1.56
GPCPD1-201ENST00000379019 ZNF625Q96I27 306 aaPredicted RBP5.28□□□□□ -1.56
GPCPD1-201ENST00000379019 TRAV12-1A0A0B4J245 112 aa5.28□□□□□ -1.56
GPCPD1-201ENST00000379019 HERV-K104P63124 156 aa5.28□□□□□ -1.56
GPCPD1-201ENST00000379019 TRAV2A0A0B4J234 112 aa5.28□□□□□ -1.56
GPCPD1-201ENST00000379019 NXPH4O95158 308 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms