RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 NUP35Q8NFH5 326 aa11.2□□□□□ -0.62
RER1-202ENST00000378512 DNAH8Q96JB1 4490 aa11.2□□□□□ -0.62
RER1-202ENST00000378512 SMR3BP02814 79 aaPredicted RBP11.19□□□□□ -0.62
RER1-202ENST00000378512 ANGP03950 147 aaKnown RBP11.19□□□□□ -0.62
RER1-202ENST00000378512 GAGE6Q13070 117 aa11.19□□□□□ -0.62
RER1-202ENST00000378512 MIAQ16674 131 aa11.19□□□□□ -0.62
RER1-202ENST00000378512 BORCS7Q96B45 105 aa11.19□□□□□ -0.62
RER1-202ENST00000378512 RPL39LQ96EH5 51 aaKnown RBP11.19□□□□□ -0.62
RER1-202ENST00000378512 RNF185Q96GF1 192 aa11.19□□□□□ -0.62
RER1-202ENST00000378512 IGLV5-52A0A0A0MRZ9 124 aa11.18□□□□□ -0.62
RER1-202ENST00000378512 SMIM27A0A1W2PRY6 76 aa11.18□□□□□ -0.62
RER1-202ENST00000378512 ADIRFQ15847 76 aa11.18□□□□□ -0.62
RER1-202ENST00000378512 C20orf203Q8NBC4 194 aa11.18□□□□□ -0.62
RER1-202ENST00000378512 TMEM243Q9BU79 118 aa11.18□□□□□ -0.62
RER1-202ENST00000378512 COTL1Q14019 142 aa11.18□□□□□ -0.62
RER1-202ENST00000378512 Q5VSD8 79 aa11.18□□□□□ -0.62
RER1-202ENST00000378512 KRTAP26-1Q6PEX3 210 aa11.18□□□□□ -0.62
RER1-202ENST00000378512 BAALCQ8WXS3 180 aa11.18□□□□□ -0.62
RER1-202ENST00000378512 C1orf43Q9BWL3 253 aa11.18□□□□□ -0.62
RER1-202ENST00000378512 NAT8BQ9UHF3 227 aa11.18□□□□□ -0.62
RER1-202ENST00000378512 GAS8-AS1O95177 125 aa11.17□□□□□ -0.62
RER1-202ENST00000378512 NCR2O95944 276 aa11.17□□□□□ -0.62
RER1-202ENST00000378512 CRPP02741 224 aa11.17□□□□□ -0.62
RER1-202ENST00000378512 RAB4AP20338 218 aa11.17□□□□□ -0.62
RER1-202ENST00000378512 SDHAF1A6NFY7 115 aa11.16□□□□□ -0.62
RER1-202ENST00000378512 LECT2O14960 151 aa11.16□□□□□ -0.62
RER1-202ENST00000378512 INAFM2P0DMQ5 153 aa11.16□□□□□ -0.62
RER1-202ENST00000378512 RIGQ13278 110 aa11.16□□□□□ -0.62
RER1-202ENST00000378512 LINC00269Q8N2A0 174 aa11.16□□□□□ -0.62
RER1-202ENST00000378512 MYCBP2O75592 4640 aa11.15□□□□□ -0.62
RER1-202ENST00000378512 IGLV4-60A0A075B6I1 120 aa11.15□□□□□ -0.62
RER1-202ENST00000378512 AMTP48728 403 aa11.15□□□□□ -0.62
RER1-202ENST00000378512 MRAP2Q96G30 205 aa11.15□□□□□ -0.62
RER1-202ENST00000378512 POLR2KP53803 58 aaKnown RBP11.14□□□□□ -0.63
RER1-202ENST00000378512 AMN1Q8IY45 258 aa11.14□□□□□ -0.63
RER1-202ENST00000378512 TMEM70Q9BUB7 260 aa11.14□□□□□ -0.63
RER1-202ENST00000378512 H7C423 109 aa11.13□□□□□ -0.63
RER1-202ENST00000378512 RPS10P46783 165 aaKnown RBP11.13□□□□□ -0.63
RER1-202ENST00000378512 REG3AQ06141 175 aa11.13□□□□□ -0.63
RER1-202ENST00000378512 CLLU1Q5K131 121 aa11.13□□□□□ -0.63
RER1-202ENST00000378512 DEFB104AQ8WTQ1 72 aa11.13□□□□□ -0.63
RER1-202ENST00000378512 FAM30AQ9NZY2 134 aa11.13□□□□□ -0.63
RER1-202ENST00000378512 SRRM2Q9UQ35 2752 aaKnown RBP11.13□□□□□ -0.63
RER1-202ENST00000378512 I3L3M4 83 aa11.12□□□□□ -0.63
RER1-202ENST00000378512 RAB14P61106 215 aa11.12□□□□□ -0.63
RER1-202ENST00000378512 Q6ZSA8 131 aa11.12□□□□□ -0.63
RER1-202ENST00000378512 TRAV8-4A0A0B4J246 113 aa11.11□□□□□ -0.63
RER1-202ENST00000378512 TRBV27A0A0K0K1C4 114 aa11.11□□□□□ -0.63
RER1-202ENST00000378512 A0A1B0GW15 77 aa11.11□□□□□ -0.63
RER1-202ENST00000378512 ESDP10768 282 aa11.11□□□□□ -0.63
RER1-202ENST00000378512 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.1□□□□□ -0.63
RER1-202ENST00000378512 UBE2L6O14933 153 aa11.1□□□□□ -0.63
RER1-202ENST00000378512 IFITM2Q01629 132 aa11.1□□□□□ -0.63
RER1-202ENST00000378512 FAM104BQ5XKR9 115 aa11.1□□□□□ -0.63
RER1-202ENST00000378512 CLPSL2Q6UWE3 100 aa11.1□□□□□ -0.63
RER1-202ENST00000378512 NRACQ8N912 160 aa11.1□□□□□ -0.63
RER1-202ENST00000378512 ST20Q9HBF5 79 aa11.1□□□□□ -0.63
RER1-202ENST00000378512 A0A1B0GXF2 115 aa11.09□□□□□ -0.63
RER1-202ENST00000378512 TSHBP01222 138 aa11.09□□□□□ -0.63
RER1-202ENST00000378512 APCSP02743 223 aa11.09□□□□□ -0.63
RER1-202ENST00000378512 C14orf177Q52M58 125 aa11.09□□□□□ -0.63
RER1-202ENST00000378512 PPP1R17O96001 155 aa11.09□□□□□ -0.63
RER1-202ENST00000378512 PMCHP20382 165 aa11.09□□□□□ -0.63
RER1-202ENST00000378512 PNRC1Q12796 327 aaPredicted RBP11.09□□□□□ -0.63
RER1-202ENST00000378512 MRPL51Q4U2R6 128 aaKnown RBP11.09□□□□□ -0.63
RER1-202ENST00000378512 USP17L23D6RBM5 183 aa11.08□□□□□ -0.64
RER1-202ENST00000378512 TRBV24-1A0A075B6N3 115 aa11.07□□□□□ -0.64
RER1-202ENST00000378512 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.07□□□□□ -0.64
RER1-202ENST00000378512 IGKV2-29A2NJV5 120 aaPredicted RBP11.07□□□□□ -0.64
RER1-202ENST00000378512 LINC00862A6NCI5 91 aa11.07□□□□□ -0.64
RER1-202ENST00000378512 SMKR1H3BMG3 65 aa11.07□□□□□ -0.64
RER1-202ENST00000378512 PPP1R2P9O14990 202 aa11.07□□□□□ -0.64
RER1-202ENST00000378512 HLA-DQA1P01909 254 aa11.07□□□□□ -0.64
RER1-202ENST00000378512 ZNF25P17030 456 aaPredicted RBP11.07□□□□□ -0.64
RER1-202ENST00000378512 FLG2Q5D862 2391 aaPredicted RBP11.06□□□□□ -0.64
RER1-202ENST00000378512 DMBT1Q9UGM3 2413 aaPredicted RBP11.06□□□□□ -0.64
RER1-202ENST00000378512 FGF6P10767 208 aa11.06□□□□□ -0.64
RER1-202ENST00000378512 CAMPP49913 170 aa11.06□□□□□ -0.64
RER1-202ENST00000378512 SUMO2P61956 95 aaKnown RBP11.06□□□□□ -0.64
RER1-202ENST00000378512 TMEM242Q9NWH2 141 aa11.06□□□□□ -0.64
RER1-202ENST00000378512 IGLV10-54A0A075B6I4 117 aa11.05□□□□□ -0.64
RER1-202ENST00000378512 PRSS1P07477 247 aa11.05□□□□□ -0.64
RER1-202ENST00000378512 RPL32P62910 135 aaKnown RBP11.05□□□□□ -0.64
RER1-202ENST00000378512 HBBP68871 147 aa11.05□□□□□ -0.64
RER1-202ENST00000378512 LINC01620Q4KN68 170 aa11.05□□□□□ -0.64
RER1-202ENST00000378512 ATP5L2Q7Z4Y8 100 aa11.05□□□□□ -0.64
RER1-202ENST00000378512 MRPL52Q86TS9 123 aaKnown RBP11.05□□□□□ -0.64
RER1-202ENST00000378512 VCYO14598 125 aa11.04□□□□□ -0.64
RER1-202ENST00000378512 S100A8P05109 93 aa11.04□□□□□ -0.64
RER1-202ENST00000378512 AMMECR1LQ6DCA0 310 aa11.03□□□□□ -0.64
RER1-202ENST00000378512 DGAT2L7PQ6IED9 249 aa11.03□□□□□ -0.64
RER1-202ENST00000378512 MRPL54Q6P161 138 aaKnown RBP11.03□□□□□ -0.64
RER1-202ENST00000378512 CLRN3Q8NCR9 226 aa11.03□□□□□ -0.64
RER1-202ENST00000378512 ANAPC16Q96DE5 110 aa11.03□□□□□ -0.64
RER1-202ENST00000378512 C20orf78Q9BR46 151 aa11.03□□□□□ -0.64
RER1-202ENST00000378512 FAM229AH3BQW9 127 aa11.02□□□□□ -0.64
RER1-202ENST00000378512 UQCC3Q6UW78 93 aa11.02□□□□□ -0.64
RER1-202ENST00000378512 C7orf77A4D0Y5 90 aa11.01□□□□□ -0.65
RER1-202ENST00000378512 F8W036 122 aa11.01□□□□□ -0.65
RER1-202ENST00000378512 RNASEKQ6P5S7 137 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms