RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 IGHV3-53P01767 116 aa13.91□□□□□ -0.18
PCDHA4-201ENST00000378125 PAPPA-AS1Q5QFB9 102 aa13.91□□□□□ -0.18
PCDHA4-201ENST00000378125 TRBV7-3A0A075B6L6 115 aa13.9□□□□□ -0.18
PCDHA4-201ENST00000378125 A0A0J9YXV3 536 aa13.9□□□□□ -0.18
PCDHA4-201ENST00000378125 HERVK_113P61574 105 aa13.9□□□□□ -0.18
PCDHA4-201ENST00000378125 RNASE8Q8TDE3 154 aaKnown RBP13.9□□□□□ -0.18
PCDHA4-201ENST00000378125 SPXQ9BT56 116 aa13.9□□□□□ -0.18
PCDHA4-201ENST00000378125 VCX2Q9H322 139 aa13.9□□□□□ -0.18
PCDHA4-201ENST00000378125 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.9□□□□□ -0.18
PCDHA4-201ENST00000378125 A0A1W2PPM0 123 aa13.9□□□□□ -0.18
PCDHA4-201ENST00000378125 IGKV2-29A2NJV5 120 aaPredicted RBP13.9□□□□□ -0.18
PCDHA4-201ENST00000378125 ADARB2-AS1A8MUL3 147 aa13.9□□□□□ -0.18
PCDHA4-201ENST00000378125 SAMD5Q5TGI4 173 aa13.9□□□□□ -0.18
PCDHA4-201ENST00000378125 LINC00467Q9BRT7 94 aa13.89□□□□□ -0.19
PCDHA4-201ENST00000378125 EDA2RQ9HAV5 297 aa13.89□□□□□ -0.19
PCDHA4-201ENST00000378125 GAGE12BA1L429 117 aa13.88□□□□□ -0.19
PCDHA4-201ENST00000378125 RS1O15537 224 aa13.88□□□□□ -0.19
PCDHA4-201ENST00000378125 BEAN1Q3B7T3 259 aa13.88□□□□□ -0.19
PCDHA4-201ENST00000378125 CBY1Q9Y3M2 126 aa13.88□□□□□ -0.19
PCDHA4-201ENST00000378125 TAL2Q16559 108 aa13.87□□□□□ -0.19
PCDHA4-201ENST00000378125 Q6ZTI0 123 aa13.87□□□□□ -0.19
PCDHA4-201ENST00000378125 FAM104AQ969W3 186 aa13.87□□□□□ -0.19
PCDHA4-201ENST00000378125 ZNF479Q96JC4 524 aa13.87□□□□□ -0.19
PCDHA4-201ENST00000378125 LY6G6DO95868 133 aa13.87□□□□□ -0.19
PCDHA4-201ENST00000378125 KRTAP10-3P60369 221 aa13.87□□□□□ -0.19
PCDHA4-201ENST00000378125 SRSF9Q13242 221 aaKnown RBP eCLIP13.87□□□□□ -0.19
PCDHA4-201ENST00000378125 C12orf74Q32Q52 190 aa13.87□□□□□ -0.19
PCDHA4-201ENST00000378125 CLUHP3Q96NS8 147 aa13.87□□□□□ -0.19
PCDHA4-201ENST00000378125 SPCS1Q9Y6A9 102 aa13.87□□□□□ -0.19
PCDHA4-201ENST00000378125 RHODO00212 210 aa13.86□□□□□ -0.19
PCDHA4-201ENST00000378125 K7EP34 96 aa13.86□□□□□ -0.19
PCDHA4-201ENST00000378125 IGLV1-51P01701 117 aa13.86□□□□□ -0.19
PCDHA4-201ENST00000378125 GIG44P09565 113 aaPredicted RBP13.86□□□□□ -0.19
PCDHA4-201ENST00000378125 PIK3CD-AS1Q5SR53 167 aa13.86□□□□□ -0.19
PCDHA4-201ENST00000378125 GTF2H5Q6ZYL4 71 aa13.86□□□□□ -0.19
PCDHA4-201ENST00000378125 CHCHD7Q9BUK0 85 aa13.86□□□□□ -0.19
PCDHA4-201ENST00000378125 OTOGQ6ZRI0 2925 aa13.85□□□□□ -0.19
PCDHA4-201ENST00000378125 PTH2Q96A98 100 aa13.85□□□□□ -0.19
PCDHA4-201ENST00000378125 FABP2P12104 132 aa13.85□□□□□ -0.19
PCDHA4-201ENST00000378125 ZNF22P17026 224 aaPredicted RBP13.85□□□□□ -0.19
PCDHA4-201ENST00000378125 NFE4Q86UQ8 179 aa13.85□□□□□ -0.19
PCDHA4-201ENST00000378125 NOP10Q9NPE3 64 aaKnown RBP13.85□□□□□ -0.19
PCDHA4-201ENST00000378125 J3QQQ9 107 aa13.84□□□□□ -0.19
PCDHA4-201ENST00000378125 TMEM223A0PJW6 202 aa13.83□□□□□ -0.2
PCDHA4-201ENST00000378125 LGALS3P17931 250 aaKnown RBP13.83□□□□□ -0.2
PCDHA4-201ENST00000378125 C19orf73Q9NVV2 129 aa13.82□□□□□ -0.2
PCDHA4-201ENST00000378125 A0A0J9YY99 117 aa13.82□□□□□ -0.2
PCDHA4-201ENST00000378125 IGLL5B9A064 214 aa13.82□□□□□ -0.2
PCDHA4-201ENST00000378125 COTL1Q14019 142 aa13.82□□□□□ -0.2
PCDHA4-201ENST00000378125 IL17DQ8TAD2 202 aa13.82□□□□□ -0.2
PCDHA4-201ENST00000378125 TMEM263Q8WUH6 116 aaKnown RBP13.81□□□□□ -0.2
PCDHA4-201ENST00000378125 UBE2D4Q9Y2X8 147 aa13.81□□□□□ -0.2
PCDHA4-201ENST00000378125 PYGO1Q9Y3Y4 419 aa13.81□□□□□ -0.2
PCDHA4-201ENST00000378125 NDUFA7O95182 113 aa13.8□□□□□ -0.2
PCDHA4-201ENST00000378125 Q6ZUT4 128 aa13.8□□□□□ -0.2
PCDHA4-201ENST00000378125 AMELXQ99217 191 aa13.8□□□□□ -0.2
PCDHA4-201ENST00000378125 FN1P02751 2386 aaKnown RBP13.8□□□□□ -0.2
PCDHA4-201ENST00000378125 INAFM1C9JVW0 142 aa13.79□□□□□ -0.2
PCDHA4-201ENST00000378125 PF4P02776 101 aa13.79□□□□□ -0.2
PCDHA4-201ENST00000378125 DNAJC30Q96LL9 226 aa13.79□□□□□ -0.2
PCDHA4-201ENST00000378125 TRAV8-3A0A0A6YYJ7 113 aa13.79□□□□□ -0.2
PCDHA4-201ENST00000378125 GAGE7O76087 117 aa13.79□□□□□ -0.2
PCDHA4-201ENST00000378125 GAGE12FP0CL80 117 aa13.79□□□□□ -0.2
PCDHA4-201ENST00000378125 GAGE12GP0CL81 117 aa13.79□□□□□ -0.2
PCDHA4-201ENST00000378125 GAGE12IP0CL82 117 aa13.79□□□□□ -0.2
PCDHA4-201ENST00000378125 LEPROTO15243 131 aa13.78□□□□□ -0.2
PCDHA4-201ENST00000378125 RNF151Q2KHN1 245 aa13.78□□□□□ -0.2
PCDHA4-201ENST00000378125 VWFP04275 2813 aa13.78□□□□□ -0.2
PCDHA4-201ENST00000378125 C2CD3Q4AC94 2353 aa13.78□□□□□ -0.2
PCDHA4-201ENST00000378125 APOMO95445 188 aa13.78□□□□□ -0.2
PCDHA4-201ENST00000378125 C21orf62-AS1Q17RA5 79 aa13.78□□□□□ -0.2
PCDHA4-201ENST00000378125 SFTA2Q6UW10 78 aa13.78□□□□□ -0.2
PCDHA4-201ENST00000378125 GAGE12JA6NER3 117 aa13.77□□□□□ -0.21
PCDHA4-201ENST00000378125 GAGE4Q13068 117 aa13.77□□□□□ -0.21
PCDHA4-201ENST00000378125 GAGE5Q13069 117 aa13.77□□□□□ -0.21
PCDHA4-201ENST00000378125 GAGE13Q4V321 117 aa13.77□□□□□ -0.21
PCDHA4-201ENST00000378125 SLC25A29Q8N8R3 303 aa13.77□□□□□ -0.21
PCDHA4-201ENST00000378125 A8MZ25 164 aa13.76□□□□□ -0.21
PCDHA4-201ENST00000378125 CMC4P56277 68 aaPredicted RBP13.76□□□□□ -0.21
PCDHA4-201ENST00000378125 K7EQD1 137 aa13.76□□□□□ -0.21
PCDHA4-201ENST00000378125 SPATA3Q8NHX4 192 aa13.76□□□□□ -0.21
PCDHA4-201ENST00000378125 TRGV2A0A075B6R0 118 aa13.75□□□□□ -0.21
PCDHA4-201ENST00000378125 PLAC8L1A1L4L8 177 aa13.75□□□□□ -0.21
PCDHA4-201ENST00000378125 LINC00694P0DN24 101 aa13.75□□□□□ -0.21
PCDHA4-201ENST00000378125 MRPS36P82909 103 aaKnown RBP13.75□□□□□ -0.21
PCDHA4-201ENST00000378125 OCIAD2Q56VL3 154 aa13.75□□□□□ -0.21
PCDHA4-201ENST00000378125 SPANXA1Q9NS26 97 aa13.75□□□□□ -0.21
PCDHA4-201ENST00000378125 PGPEP1Q9NXJ5 209 aa13.75□□□□□ -0.21
PCDHA4-201ENST00000378125 IGHV3-30-3P0DP02 117 aa13.74□□□□□ -0.21
PCDHA4-201ENST00000378125 PCP4P48539 62 aa13.74□□□□□ -0.21
PCDHA4-201ENST00000378125 RRN3P1Q2M238 152 aa13.74□□□□□ -0.21
PCDHA4-201ENST00000378125 DGAT2L7PQ6IED9 249 aa13.74□□□□□ -0.21
PCDHA4-201ENST00000378125 CSNK1G2-AS1Q8NCQ2 148 aa13.74□□□□□ -0.21
PCDHA4-201ENST00000378125 TIMM21Q9BVV7 248 aa13.74□□□□□ -0.21
PCDHA4-201ENST00000378125 TRAV4A0A0B4J268 109 aa13.74□□□□□ -0.21
PCDHA4-201ENST00000378125 A0A1B0GWB2 263 aa13.74□□□□□ -0.21
PCDHA4-201ENST00000378125 SPINK8P0C7L1 97 aa13.74□□□□□ -0.21
PCDHA4-201ENST00000378125 RPL36AP83881 106 aaKnown RBP13.74□□□□□ -0.21
PCDHA4-201ENST00000378125 OR5A1Q8NGJ0 315 aa13.74□□□□□ -0.21
PCDHA4-201ENST00000378125 RPL36ALQ969Q0 106 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms