RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 SIRPDQ9H106 197 aa6.41□□□□□ -1.38
VPS36-201ENST00000378060 ANGP03950 147 aaKnown RBP6.41□□□□□ -1.38
VPS36-201ENST00000378060 MYCNOSP40205 109 aa6.41□□□□□ -1.38
VPS36-201ENST00000378060 DSCAML1Q8TD84 2053 aa6.41□□□□□ -1.38
VPS36-201ENST00000378060 ZNF80P51504 273 aaPredicted RBP6.41□□□□□ -1.38
VPS36-201ENST00000378060 NOP10Q9NPE3 64 aaKnown RBP6.41□□□□□ -1.38
VPS36-201ENST00000378060 FBN2P35556 2912 aa6.41□□□□□ -1.38
VPS36-201ENST00000378060 NKAPP1Q8N9T2 125 aa6.41□□□□□ -1.38
VPS36-201ENST00000378060 C10orf105Q8TEF2 133 aa6.41□□□□□ -1.38
VPS36-201ENST00000378060 SND1-IT1Q9HBX3 110 aa6.41□□□□□ -1.38
VPS36-201ENST00000378060 A0A0B4J2C4 111 aa6.4□□□□□ -1.38
VPS36-201ENST00000378060 IGHV4-38-2P0DP08 117 aa6.4□□□□□ -1.38
VPS36-201ENST00000378060 DAZAP2Q15038 168 aaPredicted RBP6.4□□□□□ -1.38
VPS36-201ENST00000378060 RBMY1FQ15415 496 aaKnown RBP6.4□□□□□ -1.38
VPS36-201ENST00000378060 C1orf229Q6ZS94 237 aaPredicted RBP6.4□□□□□ -1.38
VPS36-201ENST00000378060 SORL1Q92673 2214 aa6.4□□□□□ -1.38
VPS36-201ENST00000378060 ADORA2A-AS1P86434 159 aa6.4□□□□□ -1.38
VPS36-201ENST00000378060 TINCRA0A1B0GVN0 87 aa6.4□□□□□ -1.39
VPS36-201ENST00000378060 CRYGBP07316 175 aa6.4□□□□□ -1.39
VPS36-201ENST00000378060 ZFP36P26651 326 aaKnown RBP6.4□□□□□ -1.39
VPS36-201ENST00000378060 Q71RC1 249 aaPredicted RBP6.4□□□□□ -1.39
VPS36-201ENST00000378060 NDUFA11Q86Y39 141 aa6.4□□□□□ -1.39
VPS36-201ENST00000378060 TMEM126AQ9H061 195 aa6.4□□□□□ -1.39
VPS36-201ENST00000378060 IGHV1-58A0A0C4DH39 117 aa6.39□□□□□ -1.39
VPS36-201ENST00000378060 ODF3BA8MYP8 253 aa6.39□□□□□ -1.39
VPS36-201ENST00000378060 CCL24O00175 119 aa6.39□□□□□ -1.39
VPS36-201ENST00000378060 TRBV7-3A0A075B6L6 115 aa6.39□□□□□ -1.39
VPS36-201ENST00000378060 A0A0J9YX75 114 aa6.39□□□□□ -1.39
VPS36-201ENST00000378060 K7EQD1 137 aa6.39□□□□□ -1.39
VPS36-201ENST00000378060 ATOX1O00244 68 aa6.39□□□□□ -1.39
VPS36-201ENST00000378060 VSIG2Q96IQ7 327 aa6.39□□□□□ -1.39
VPS36-201ENST00000378060 NAV3Q8IVL0 2385 aa6.39□□□□□ -1.39
VPS36-201ENST00000378060 TRAV25A0A0B4J276 109 aa6.39□□□□□ -1.39
VPS36-201ENST00000378060 C16orf74Q96GX8 76 aa6.39□□□□□ -1.39
VPS36-201ENST00000378060 H3BQ85 93 aa6.38□□□□□ -1.39
VPS36-201ENST00000378060 XCL1P47992 114 aa6.38□□□□□ -1.39
VPS36-201ENST00000378060 C5orf38Q86SI9 138 aa6.38□□□□□ -1.39
VPS36-201ENST00000378060 ODF3Q96PU9 254 aa6.38□□□□□ -1.39
VPS36-201ENST00000378060 U3KQK5 164 aa6.38□□□□□ -1.39
VPS36-201ENST00000378060 IGHV4-30-2A0A087WSY4 118 aa6.38□□□□□ -1.39
VPS36-201ENST00000378060 CDK2AP2O75956 126 aa6.38□□□□□ -1.39
VPS36-201ENST00000378060 MYO9AB2RTY4 2548 aa6.38□□□□□ -1.39
VPS36-201ENST00000378060 USP9YO00507 2555 aaPredicted RBP6.38□□□□□ -1.39
VPS36-201ENST00000378060 DOPEY1Q5JWR5 2465 aa6.38□□□□□ -1.39
VPS36-201ENST00000378060 TRAV4A0A0B4J268 109 aa6.38□□□□□ -1.39
VPS36-201ENST00000378060 TRBV10-1A0A0K0K1A3 114 aa6.38□□□□□ -1.39
VPS36-201ENST00000378060 IGHV3-30-3P0DP02 117 aa6.38□□□□□ -1.39
VPS36-201ENST00000378060 EBI3Q14213 229 aa6.38□□□□□ -1.39
VPS36-201ENST00000378060 MDFICQ9P1T7 246 aa6.38□□□□□ -1.39
VPS36-201ENST00000378060 ABCA2Q9BZC7 2435 aa6.38□□□□□ -1.39
VPS36-201ENST00000378060 SLURP1P55000 103 aa6.37□□□□□ -1.39
VPS36-201ENST00000378060 UNQ9165/PRO28630Q6UXU0 137 aa6.37□□□□□ -1.39
VPS36-201ENST00000378060 UBE2DNLQ8IWF7 75 aa6.37□□□□□ -1.39
VPS36-201ENST00000378060 COX7B2Q8TF08 81 aa6.37□□□□□ -1.39
VPS36-201ENST00000378060 CCDC140Q96MF4 163 aa6.37□□□□□ -1.39
VPS36-201ENST00000378060 FASNP49327 2511 aaKnown RBP6.37□□□□□ -1.39
VPS36-201ENST00000378060 LGALS9O00182 355 aa6.37□□□□□ -1.39
VPS36-201ENST00000378060 PSCAO43653 123 aa6.37□□□□□ -1.39
VPS36-201ENST00000378060 APRG1Q8IVJ8 170 aa6.37□□□□□ -1.39
VPS36-201ENST00000378060 JMJD7-PLA2G4BH0Y9G9 81 aa6.36□□□□□ -1.39
VPS36-201ENST00000378060 DEFB136Q30KP8 78 aa6.36□□□□□ -1.39
VPS36-201ENST00000378060 NEXN-AS1Q8NBZ9 246 aa6.36□□□□□ -1.39
VPS36-201ENST00000378060 RMI2Q96E14 147 aa6.36□□□□□ -1.39
VPS36-201ENST00000378060 OPRPNQ99935 248 aaPredicted RBP6.36□□□□□ -1.39
VPS36-201ENST00000378060 CRIP1P50238 77 aa6.36□□□□□ -1.39
VPS36-201ENST00000378060 IGHV4OR15-8A0A075B7B6 117 aa6.36□□□□□ -1.39
VPS36-201ENST00000378060 A0A087WW49 117 aa6.36□□□□□ -1.39
VPS36-201ENST00000378060 A6NDX4 124 aa6.36□□□□□ -1.39
VPS36-201ENST00000378060 NAV2Q8IVL1 2488 aa6.36□□□□□ -1.39
VPS36-201ENST00000378060 HIVEP2P31629 2446 aa6.36□□□□□ -1.39
VPS36-201ENST00000378060 SS18L2Q9UHA2 77 aa6.36□□□□□ -1.39
VPS36-201ENST00000378060 HECTD1Q9ULT8 2610 aa6.35□□□□□ -1.39
VPS36-201ENST00000378060 C19orf84I3L1E1 186 aa6.35□□□□□ -1.39
VPS36-201ENST00000378060 IGF1P05019 195 aa6.35□□□□□ -1.39
VPS36-201ENST00000378060 MIAQ16674 131 aa6.35□□□□□ -1.39
VPS36-201ENST00000378060 HIST2H2BCQ6DN03 193 aa6.35□□□□□ -1.39
VPS36-201ENST00000378060 TANC2Q9HCD6 1990 aa6.35□□□□□ -1.39
VPS36-201ENST00000378060 CELSR1Q9NYQ6 3014 aa6.35□□□□□ -1.39
VPS36-201ENST00000378060 FAM236AA0A1B0GUQ0 79 aa6.35□□□□□ -1.39
VPS36-201ENST00000378060 FAM236BA0A1B0GV22 79 aa6.35□□□□□ -1.39
VPS36-201ENST00000378060 LY6LH3BQJ8 138 aa6.35□□□□□ -1.39
VPS36-201ENST00000378060 ATP5G1P05496 136 aa6.35□□□□□ -1.39
VPS36-201ENST00000378060 LMO4P61968 165 aa6.35□□□□□ -1.39
VPS36-201ENST00000378060 PTH2Q96A98 100 aa6.35□□□□□ -1.39
VPS36-201ENST00000378060 SPANXB1Q9NS25 103 aaPredicted RBP6.35□□□□□ -1.39
VPS36-201ENST00000378060 POLQO75417 2590 aa6.35□□□□□ -1.39
VPS36-201ENST00000378060 COX7A2LO14548 114 aa6.35□□□□□ -1.39
VPS36-201ENST00000378060 TCL1BO95988 128 aa6.35□□□□□ -1.39
VPS36-201ENST00000378060 IGLV2-11P01706 119 aa6.35□□□□□ -1.39
VPS36-201ENST00000378060 CXCL5P42830 114 aa6.35□□□□□ -1.39
VPS36-201ENST00000378060 DEFB1P60022 68 aa6.35□□□□□ -1.39
VPS36-201ENST00000378060 RBX1P62877 108 aa6.34□□□□□ -1.39
VPS36-201ENST00000378060 MRPL23Q16540 153 aaKnown RBP6.34□□□□□ -1.39
VPS36-201ENST00000378060 LINC00643Q86TS7 51 aa6.34□□□□□ -1.39
VPS36-201ENST00000378060 CLPSL2Q6UWE3 100 aa6.34□□□□□ -1.39
VPS36-201ENST00000378060 ABCA12Q86UK0 2595 aa6.34□□□□□ -1.39
VPS36-201ENST00000378060 GYPEP15421 78 aa6.34□□□□□ -1.39
VPS36-201ENST00000378060 Q6ZUT4 128 aa6.34□□□□□ -1.39
VPS36-201ENST00000378060 ZFAND3Q9H8U3 227 aa6.34□□□□□ -1.39
VPS36-201ENST00000378060 A0A096LPF7 62 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms