RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ANGP03950 147 aaKnown RBP6.51□□□□□ -1.37
PCDH9-202ENST00000377865 CRYGDP07320 174 aa6.51□□□□□ -1.37
PCDH9-202ENST00000377865 C14orf132Q9NPU4 83 aa6.51□□□□□ -1.37
PCDH9-202ENST00000377865 Q96MF0 132 aa6.5□□□□□ -1.37
PCDH9-202ENST00000377865 Q9HAA7 133 aa6.5□□□□□ -1.37
PCDH9-202ENST00000377865 NDUFA7O95182 113 aa6.5□□□□□ -1.37
PCDH9-202ENST00000377865 CLUHP3Q96NS8 147 aa6.5□□□□□ -1.37
PCDH9-202ENST00000377865 RP1L1Q8IWN7 2480 aaPredicted RBP6.5□□□□□ -1.37
PCDH9-202ENST00000377865 CADP27708 2225 aa6.5□□□□□ -1.37
PCDH9-202ENST00000377865 TPRP12270 2363 aaKnown RBP6.5□□□□□ -1.37
PCDH9-202ENST00000377865 IBA57-AS1B1ANH7 110 aa6.49□□□□□ -1.37
PCDH9-202ENST00000377865 IGLV1-40P01703 118 aa6.49□□□□□ -1.37
PCDH9-202ENST00000377865 NKAPP1Q8N9T2 125 aa6.49□□□□□ -1.37
PCDH9-202ENST00000377865 F5H768 121 aa6.49□□□□□ -1.37
PCDH9-202ENST00000377865 TSPEAR-AS2P59090 65 aa6.49□□□□□ -1.37
PCDH9-202ENST00000377865 MAPK1IP1LQ8NDC0 245 aa6.49□□□□□ -1.37
PCDH9-202ENST00000377865 GYPEP15421 78 aa6.49□□□□□ -1.37
PCDH9-202ENST00000377865 DCANP1Q8TF63 244 aa6.49□□□□□ -1.37
PCDH9-202ENST00000377865 C5orf47Q569G3 176 aa6.48□□□□□ -1.37
PCDH9-202ENST00000377865 CLPSL2Q6UWE3 100 aa6.48□□□□□ -1.37
PCDH9-202ENST00000377865 CDIP1Q9H305 208 aa6.48□□□□□ -1.37
PCDH9-202ENST00000377865 RBM3P98179 157 aaKnown RBP6.48□□□□□ -1.37
PCDH9-202ENST00000377865 C3orf56Q8N813 242 aa6.48□□□□□ -1.37
PCDH9-202ENST00000377865 LRRC75A-AS1Q8N1F1 130 aa6.48□□□□□ -1.37
PCDH9-202ENST00000377865 COX7CP15954 63 aa6.47□□□□□ -1.37
PCDH9-202ENST00000377865 TNCP24821 2201 aa6.47□□□□□ -1.37
PCDH9-202ENST00000377865 Q6ZQT7 251 aa6.47□□□□□ -1.37
PCDH9-202ENST00000377865 PRO0461Q9UI25 63 aa6.47□□□□□ -1.37
PCDH9-202ENST00000377865 ZGRF1Q86YA3 2104 aa6.46□□□□□ -1.37
PCDH9-202ENST00000377865 PCNX2A6NKB5 2137 aa6.46□□□□□ -1.37
PCDH9-202ENST00000377865 RPL18AQ02543 176 aaKnown RBP6.46□□□□□ -1.37
PCDH9-202ENST00000377865 SDIM1Q6ZPB5 146 aa6.46□□□□□ -1.37
PCDH9-202ENST00000377865 NCR3O14931 201 aa6.46□□□□□ -1.38
PCDH9-202ENST00000377865 AMELXQ99217 191 aa6.46□□□□□ -1.38
PCDH9-202ENST00000377865 Q6JHZ5 121 aa6.46□□□□□ -1.38
PCDH9-202ENST00000377865 SERP2Q8N6R1 65 aa6.46□□□□□ -1.38
PCDH9-202ENST00000377865 SVIPQ8NHG7 77 aa6.46□□□□□ -1.38
PCDH9-202ENST00000377865 UPK3BQ9BT76 320 aa6.45□□□□□ -1.38
PCDH9-202ENST00000377865 NDUFC2O95298 119 aa6.45□□□□□ -1.38
PCDH9-202ENST00000377865 Q6YL49 198 aa6.45□□□□□ -1.38
PCDH9-202ENST00000377865 PKDREJQ9NTG1 2253 aa6.45□□□□□ -1.38
PCDH9-202ENST00000377865 DSCAMO60469 2012 aa6.45□□□□□ -1.38
PCDH9-202ENST00000377865 PCSK5Q92824 1860 aa6.45□□□□□ -1.38
PCDH9-202ENST00000377865 ZNF580Q9UK33 172 aa6.45□□□□□ -1.38
PCDH9-202ENST00000377865 A0A096LPF7 62 aa6.45□□□□□ -1.38
PCDH9-202ENST00000377865 POM121L12Q8N7R1 296 aa6.45□□□□□ -1.38
PCDH9-202ENST00000377865 DIRC1Q969H9 104 aa6.45□□□□□ -1.38
PCDH9-202ENST00000377865 PRORYQ9H606 182 aa6.45□□□□□ -1.38
PCDH9-202ENST00000377865 PROK1P58294 105 aa6.44□□□□□ -1.38
PCDH9-202ENST00000377865 DEFB113Q30KQ7 82 aa6.44□□□□□ -1.38
PCDH9-202ENST00000377865 TRBV6-4A0A1B0GX49 114 aa6.44□□□□□ -1.38
PCDH9-202ENST00000377865 DEFB114Q30KQ6 69 aa6.44□□□□□ -1.38
PCDH9-202ENST00000377865 PRR14LQ5THK1 2151 aa6.44□□□□□ -1.38
PCDH9-202ENST00000377865 Q6ZTI0 123 aa6.43□□□□□ -1.38
PCDH9-202ENST00000377865 FAM110AQ9BQ89 295 aa6.43□□□□□ -1.38
PCDH9-202ENST00000377865 BPTFQ12830 3046 aa6.43□□□□□ -1.38
PCDH9-202ENST00000377865 A8MZ25 164 aa6.43□□□□□ -1.38
PCDH9-202ENST00000377865 SBSPONQ8IVN8 264 aa6.43□□□□□ -1.38
PCDH9-202ENST00000377865 TECTAO75443 2155 aa6.43□□□□□ -1.38
PCDH9-202ENST00000377865 FAM236DA0A1B0GTK5 79 aa6.43□□□□□ -1.38
PCDH9-202ENST00000377865 FAM236CP0DP71 79 aa6.43□□□□□ -1.38
PCDH9-202ENST00000377865 CHCHD7Q9BUK0 85 aa6.43□□□□□ -1.38
PCDH9-202ENST00000377865 FUSP35637 526 aaKnown RBP eCLIP6.43□□□□□ -1.38
PCDH9-202ENST00000377865 LINC00526Q96FQ7 95 aa6.42□□□□□ -1.38
PCDH9-202ENST00000377865 MRAPQ8TCY5 172 aa6.42□□□□□ -1.38
PCDH9-202ENST00000377865 KIF25-AS1Q9Y6Z4 181 aa6.42□□□□□ -1.38
PCDH9-202ENST00000377865 MAP1BP46821 2468 aaKnown RBP6.42□□□□□ -1.38
PCDH9-202ENST00000377865 TRBV7-7A0A0K0K1E9 115 aa6.42□□□□□ -1.38
PCDH9-202ENST00000377865 SMCPP49901 116 aaPredicted RBP6.42□□□□□ -1.38
PCDH9-202ENST00000377865 ATP5EP56381 51 aaPredicted RBP6.42□□□□□ -1.38
PCDH9-202ENST00000377865 RMI2Q96E14 147 aa6.42□□□□□ -1.38
PCDH9-202ENST00000377865 FAM19A4Q96LR4 140 aa6.42□□□□□ -1.38
PCDH9-202ENST00000377865 SPAG11BQ08648 103 aa6.41□□□□□ -1.38
PCDH9-202ENST00000377865 C9orf66Q5T8R8 295 aa6.41□□□□□ -1.38
PCDH9-202ENST00000377865 TRAV23DV6A0A075B6W5 121 aa6.41□□□□□ -1.38
PCDH9-202ENST00000377865 RPL28P46779 137 aaKnown RBP6.41□□□□□ -1.38
PCDH9-202ENST00000377865 PRO0255Q9UI72 69 aa6.41□□□□□ -1.38
PCDH9-202ENST00000377865 TRBV6-8A0A0A6YYG3 113 aa6.41□□□□□ -1.38
PCDH9-202ENST00000377865 DPH3Q96FX2 82 aa6.41□□□□□ -1.38
PCDH9-202ENST00000377865 COX7BP24311 80 aa6.41□□□□□ -1.38
PCDH9-202ENST00000377865 NREPQ16612 68 aa6.41□□□□□ -1.38
PCDH9-202ENST00000377865 CAMK2N2Q96S95 79 aa6.41□□□□□ -1.38
PCDH9-202ENST00000377865 SMIM11BQ8TCY0 68 aa6.4□□□□□ -1.38
PCDH9-202ENST00000377865 USP17L23D6RBM5 183 aa6.4□□□□□ -1.38
PCDH9-202ENST00000377865 ZNF702PQ9H963 129 aa6.4□□□□□ -1.39
PCDH9-202ENST00000377865 ADAMTSL4-AS1Q5T5F5 129 aa6.4□□□□□ -1.39
PCDH9-202ENST00000377865 CSDC2Q9Y534 153 aaKnown RBP6.4□□□□□ -1.39
PCDH9-202ENST00000377865 CEP250Q9BV73 2442 aa6.4□□□□□ -1.39
PCDH9-202ENST00000377865 C19orf84I3L1E1 186 aa6.39□□□□□ -1.39
PCDH9-202ENST00000377865 CDC42SE2Q9NRR3 84 aa6.39□□□□□ -1.39
PCDH9-202ENST00000377865 IGLV10-54A0A075B6I4 117 aa6.39□□□□□ -1.39
PCDH9-202ENST00000377865 LINC00242Q5T6M2 205 aa6.39□□□□□ -1.39
PCDH9-202ENST00000377865 SMIM9A6NGZ8 99 aa6.39□□□□□ -1.39
PCDH9-202ENST00000377865 SMIM1B2RUZ4 78 aa6.39□□□□□ -1.39
PCDH9-202ENST00000377865 NDUFC1O43677 76 aa6.39□□□□□ -1.39
PCDH9-202ENST00000377865 SPART-AS1P0CW21 52 aa6.39□□□□□ -1.39
PCDH9-202ENST00000377865 ENHOQ6UWT2 76 aa6.39□□□□□ -1.39
PCDH9-202ENST00000377865 MUC7Q8TAX7 377 aa6.39□□□□□ -1.39
PCDH9-202ENST00000377865 COX17Q14061 63 aa6.39□□□□□ -1.39
PCDH9-202ENST00000377865 KLK9Q2XQG4 91 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms