RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 TRAV8-3A0A0A6YYJ7 113 aa11.89□□□□□ -0.51
TRIM27-202ENST00000377199 NDUFA11Q86Y39 141 aa11.89□□□□□ -0.51
TRIM27-202ENST00000377199 XCL2Q9UBD3 114 aa11.89□□□□□ -0.51
TRIM27-202ENST00000377199 TMEM89A2RUT3 159 aa11.89□□□□□ -0.51
TRIM27-202ENST00000377199 A8MZ25 164 aa11.89□□□□□ -0.51
TRIM27-202ENST00000377199 LINC01619G3V211 115 aa11.89□□□□□ -0.51
TRIM27-202ENST00000377199 ZNF22P17026 224 aaPredicted RBP11.89□□□□□ -0.51
TRIM27-202ENST00000377199 UBE2D1P51668 147 aa11.89□□□□□ -0.51
TRIM27-202ENST00000377199 NPC2P61916 151 aa11.89□□□□□ -0.51
TRIM27-202ENST00000377199 IGHV3-30P01768 117 aa11.88□□□□□ -0.51
TRIM27-202ENST00000377199 CFC1BP0CG36 223 aa11.88□□□□□ -0.51
TRIM27-202ENST00000377199 CFC1P0CG37 223 aa11.88□□□□□ -0.51
TRIM27-202ENST00000377199 IGHV3-30-5P0DP03 117 aa11.88□□□□□ -0.51
TRIM27-202ENST00000377199 SMAGPQ0VAQ4 97 aa11.88□□□□□ -0.51
TRIM27-202ENST00000377199 RHOHQ15669 191 aa11.88□□□□□ -0.51
TRIM27-202ENST00000377199 RHODO00212 210 aa11.88□□□□□ -0.51
TRIM27-202ENST00000377199 CR1P17927 2039 aa11.88□□□□□ -0.51
TRIM27-202ENST00000377199 SLC25A29Q8N8R3 303 aa11.87□□□□□ -0.51
TRIM27-202ENST00000377199 A4D1N5 150 aa11.87□□□□□ -0.51
TRIM27-202ENST00000377199 AMELXQ99217 191 aa11.87□□□□□ -0.51
TRIM27-202ENST00000377199 TMEM223A0PJW6 202 aa11.86□□□□□ -0.51
TRIM27-202ENST00000377199 PRSS2P07478 247 aa11.86□□□□□ -0.51
TRIM27-202ENST00000377199 MAP6D1Q9H9H5 199 aa11.86□□□□□ -0.51
TRIM27-202ENST00000377199 PRO0461Q9UI25 63 aa11.86□□□□□ -0.51
TRIM27-202ENST00000377199 Q1RN00 199 aa11.85□□□□□ -0.51
TRIM27-202ENST00000377199 HIST2H2BCQ6DN03 193 aa11.85□□□□□ -0.51
TRIM27-202ENST00000377199 J3QR89 54 aa11.85□□□□□ -0.51
TRIM27-202ENST00000377199 M0R2P5 195 aa11.85□□□□□ -0.51
TRIM27-202ENST00000377199 NFE4Q86UQ8 179 aa11.85□□□□□ -0.51
TRIM27-202ENST00000377199 PEMTQ9UBM1 199 aa11.85□□□□□ -0.51
TRIM27-202ENST00000377199 TCL1BO95988 128 aa11.84□□□□□ -0.51
TRIM27-202ENST00000377199 IGHV3-53P01767 116 aa11.84□□□□□ -0.51
TRIM27-202ENST00000377199 AZU1P20160 251 aa11.84□□□□□ -0.51
TRIM27-202ENST00000377199 DEFB113Q30KQ7 82 aa11.84□□□□□ -0.51
TRIM27-202ENST00000377199 MUSTN1Q8IVN3 82 aa11.84□□□□□ -0.51
TRIM27-202ENST00000377199 SMCPP49901 116 aaPredicted RBP11.84□□□□□ -0.51
TRIM27-202ENST00000377199 C10orf126Q8N4M7 172 aa11.84□□□□□ -0.51
TRIM27-202ENST00000377199 GAGE12HA6NDE8 117 aa11.83□□□□□ -0.52
TRIM27-202ENST00000377199 LEPROTO15243 131 aa11.83□□□□□ -0.52
TRIM27-202ENST00000377199 ZNF415Q09FC8 603 aa11.83□□□□□ -0.52
TRIM27-202ENST00000377199 TIMM21Q9BVV7 248 aa11.83□□□□□ -0.52
TRIM27-202ENST00000377199 FSHBP01225 129 aa11.83□□□□□ -0.52
TRIM27-202ENST00000377199 SPINK8P0C7L1 97 aa11.83□□□□□ -0.52
TRIM27-202ENST00000377199 IGHV3-30-3P0DP02 117 aa11.83□□□□□ -0.52
TRIM27-202ENST00000377199 CFAP126Q5VTH2 177 aa11.83□□□□□ -0.52
TRIM27-202ENST00000377199 PRO1854Q9UHT4 67 aa11.83□□□□□ -0.52
TRIM27-202ENST00000377199 A8MWV9 139 aa11.82□□□□□ -0.52
TRIM27-202ENST00000377199 LINC00467Q9BRT7 94 aa11.82□□□□□ -0.52
TRIM27-202ENST00000377199 Q6ZUT4 128 aa11.81□□□□□ -0.52
TRIM27-202ENST00000377199 TMEM238C9JI98 176 aa11.8□□□□□ -0.52
TRIM27-202ENST00000377199 DEFB114Q30KQ6 69 aa11.8□□□□□ -0.52
TRIM27-202ENST00000377199 ZNF843Q8N446 348 aa11.8□□□□□ -0.52
TRIM27-202ENST00000377199 FAM104AQ969W3 186 aa11.8□□□□□ -0.52
TRIM27-202ENST00000377199 SETXQ7Z333 2677 aaKnown RBP11.8□□□□□ -0.52
TRIM27-202ENST00000377199 C4orf3Q8WVX3 66 aa11.8□□□□□ -0.52
TRIM27-202ENST00000377199 SIGMAR1Q99720 223 aa11.8□□□□□ -0.52
TRIM27-202ENST00000377199 TRGV1A0A0A0MS02 117 aa11.79□□□□□ -0.52
TRIM27-202ENST00000377199 EIF4EBP3O60516 100 aaPredicted RBP11.79□□□□□ -0.52
TRIM27-202ENST00000377199 DAND5Q8N907 189 aa11.79□□□□□ -0.52
TRIM27-202ENST00000377199 WFDC11Q8NEX6 87 aa11.79□□□□□ -0.52
TRIM27-202ENST00000377199 A0A0J9YXY3 114 aa11.79□□□□□ -0.52
TRIM27-202ENST00000377199 A0A0U1RRA0 63 aa11.79□□□□□ -0.52
TRIM27-202ENST00000377199 INSP01308 110 aa11.79□□□□□ -0.52
TRIM27-202ENST00000377199 UBE2D3P61077 147 aa11.79□□□□□ -0.52
TRIM27-202ENST00000377199 UBE2D2P62837 147 aa11.79□□□□□ -0.52
TRIM27-202ENST00000377199 RNF152Q8N8N0 203 aa11.79□□□□□ -0.52
TRIM27-202ENST00000377199 DGAT2L7PQ6IED9 249 aa11.79□□□□□ -0.52
TRIM27-202ENST00000377199 STHQ8IWL8 128 aa11.79□□□□□ -0.52
TRIM27-202ENST00000377199 Q6ZSV7 163 aa11.78□□□□□ -0.52
TRIM27-202ENST00000377199 CHCHD7Q9BUK0 85 aa11.78□□□□□ -0.52
TRIM27-202ENST00000377199 FOXI1Q12951 378 aa11.77□□□□□ -0.52
TRIM27-202ENST00000377199 C11orf72Q8NBR9 251 aa11.77□□□□□ -0.52
TRIM27-202ENST00000377199 GEMIN7Q9H840 131 aaKnown RBP11.77□□□□□ -0.52
TRIM27-202ENST00000377199 NDUFA12Q9UI09 145 aa11.77□□□□□ -0.52
TRIM27-202ENST00000377199 NDUFA7O95182 113 aa11.77□□□□□ -0.53
TRIM27-202ENST00000377199 ODF3L2Q3SX64 289 aa11.77□□□□□ -0.53
TRIM27-202ENST00000377199 ZNF625Q96I27 306 aaPredicted RBP11.77□□□□□ -0.53
TRIM27-202ENST00000377199 C1QTNF4Q9BXJ3 329 aa11.77□□□□□ -0.53
TRIM27-202ENST00000377199 ERG28Q9UKR5 140 aa11.77□□□□□ -0.53
TRIM27-202ENST00000377199 UBE2D4Q9Y2X8 147 aa11.77□□□□□ -0.53
TRIM27-202ENST00000377199 ADAMTSL4-AS1Q5T5F5 129 aa11.76□□□□□ -0.53
TRIM27-202ENST00000377199 C9JAW5 83 aa11.76□□□□□ -0.53
TRIM27-202ENST00000377199 LYRM7Q5U5X0 104 aa11.76□□□□□ -0.53
TRIM27-202ENST00000377199 WFDC10AQ9H1F0 79 aa11.76□□□□□ -0.53
TRIM27-202ENST00000377199 MRPS36P82909 103 aaKnown RBP11.75□□□□□ -0.53
TRIM27-202ENST00000377199 FN1P02751 2386 aaKnown RBP11.75□□□□□ -0.53
TRIM27-202ENST00000377199 DNAJC9-AS1A6NH13 148 aa11.74□□□□□ -0.53
TRIM27-202ENST00000377199 IGHV3-33P01772 117 aa11.74□□□□□ -0.53
TRIM27-202ENST00000377199 CDKN2A-AS1Q9UH64 79 aa11.74□□□□□ -0.53
TRIM27-202ENST00000377199 TENM4Q6N022 2769 aa11.74□□□□□ -0.53
TRIM27-202ENST00000377199 TMEM263Q8WUH6 116 aaKnown RBP11.74□□□□□ -0.53
TRIM27-202ENST00000377199 PYGO1Q9Y3Y4 419 aa11.73□□□□□ -0.53
TRIM27-202ENST00000377199 ITPR2Q14571 2701 aa11.73□□□□□ -0.53
TRIM27-202ENST00000377199 IGHV1-58A0A0C4DH39 117 aa11.73□□□□□ -0.53
TRIM27-202ENST00000377199 Q6ZTI0 123 aa11.73□□□□□ -0.53
TRIM27-202ENST00000377199 TRAV13-1A0A0B4J241 112 aa11.73□□□□□ -0.53
TRIM27-202ENST00000377199 Q8N2B8 174 aa11.73□□□□□ -0.53
TRIM27-202ENST00000377199 ANKRD29Q8N6D5 301 aa11.72□□□□□ -0.53
TRIM27-202ENST00000377199 CITED2Q99967 270 aaPredicted RBP11.72□□□□□ -0.53
TRIM27-202ENST00000377199 ESM1Q9NQ30 184 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms