RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 CHD6Q8TD26 2715 aa6.98□□□□□ -1.29
TRIM39-202ENST00000376659 IGLL5B9A064 214 aa6.97□□□□□ -1.29
TRIM39-202ENST00000376659 H3BMG7 143 aa6.97□□□□□ -1.29
TRIM39-202ENST00000376659 SNRPD3P62318 126 aaKnown RBP6.97□□□□□ -1.29
TRIM39-202ENST00000376659 DUX5Q96PT3 197 aa6.97□□□□□ -1.29
TRIM39-202ENST00000376659 MYO18BQ8IUG5 2567 aa6.97□□□□□ -1.29
TRIM39-202ENST00000376659 LINC01549A6NIU2 74 aa6.97□□□□□ -1.29
TRIM39-202ENST00000376659 APOMO95445 188 aa6.97□□□□□ -1.29
TRIM39-202ENST00000376659 VCYO14598 125 aa6.97□□□□□ -1.29
TRIM39-202ENST00000376659 C12orf74Q32Q52 190 aa6.97□□□□□ -1.29
TRIM39-202ENST00000376659 BEAN1Q3B7T3 259 aa6.97□□□□□ -1.29
TRIM39-202ENST00000376659 C3orf56Q8N813 242 aa6.97□□□□□ -1.29
TRIM39-202ENST00000376659 MAP6D1Q9H9H5 199 aa6.97□□□□□ -1.29
TRIM39-202ENST00000376659 ESM1Q9NQ30 184 aa6.97□□□□□ -1.29
TRIM39-202ENST00000376659 PMVKQ15126 192 aa6.96□□□□□ -1.29
TRIM39-202ENST00000376659 ZFYVE26Q68DK2 2539 aa6.96□□□□□ -1.3
TRIM39-202ENST00000376659 A0A0J9YY99 117 aa6.96□□□□□ -1.3
TRIM39-202ENST00000376659 GAGE13Q4V321 117 aa6.96□□□□□ -1.3
TRIM39-202ENST00000376659 TMEM86BQ8N661 226 aa6.96□□□□□ -1.3
TRIM39-202ENST00000376659 CDIP1Q9H305 208 aa6.96□□□□□ -1.3
TRIM39-202ENST00000376659 POLQO75417 2590 aa6.96□□□□□ -1.3
TRIM39-202ENST00000376659 IGLV4-3A0A075B6K6 122 aa6.96□□□□□ -1.3
TRIM39-202ENST00000376659 TMEM223A0PJW6 202 aa6.96□□□□□ -1.3
TRIM39-202ENST00000376659 KNCNA6PVL3 124 aa6.96□□□□□ -1.3
TRIM39-202ENST00000376659 PRM2P04554 102 aa6.96□□□□□ -1.3
TRIM39-202ENST00000376659 GCSHP23434 173 aa6.96□□□□□ -1.3
TRIM39-202ENST00000376659 TTC32Q5I0X7 151 aa6.96□□□□□ -1.3
TRIM39-202ENST00000376659 HIST2H2BDQ6DRA6 164 aa6.96□□□□□ -1.3
TRIM39-202ENST00000376659 TRPT1Q86TN4 253 aaKnown RBP6.96□□□□□ -1.3
TRIM39-202ENST00000376659 C20orf203Q8NBC4 194 aa6.96□□□□□ -1.3
TRIM39-202ENST00000376659 CHCHD7Q9BUK0 85 aa6.96□□□□□ -1.3
TRIM39-202ENST00000376659 SORL1Q92673 2214 aa6.95□□□□□ -1.3
TRIM39-202ENST00000376659 PROK1P58294 105 aa6.95□□□□□ -1.3
TRIM39-202ENST00000376659 TMEM61Q8N0U2 210 aa6.95□□□□□ -1.3
TRIM39-202ENST00000376659 LITAFQ99732 161 aa6.95□□□□□ -1.3
TRIM39-202ENST00000376659 MYO9AB2RTY4 2548 aa6.95□□□□□ -1.3
TRIM39-202ENST00000376659 PYGO1Q9Y3Y4 419 aa6.95□□□□□ -1.3
TRIM39-202ENST00000376659 IGHV3-30P01768 117 aa6.94□□□□□ -1.3
TRIM39-202ENST00000376659 NHLRC4P0CG21 123 aaPredicted RBP6.94□□□□□ -1.3
TRIM39-202ENST00000376659 IGHV3-30-5P0DP03 117 aa6.94□□□□□ -1.3
TRIM39-202ENST00000376659 DEFB114Q30KQ6 69 aa6.94□□□□□ -1.3
TRIM39-202ENST00000376659 Q6ZSV7 163 aa6.94□□□□□ -1.3
TRIM39-202ENST00000376659 Q96MF0 132 aa6.94□□□□□ -1.3
TRIM39-202ENST00000376659 OPRPNQ99935 248 aaPredicted RBP6.94□□□□□ -1.3
TRIM39-202ENST00000376659 MEIG1Q5JSS6 88 aa6.94□□□□□ -1.3
TRIM39-202ENST00000376659 CFAP126Q5VTH2 177 aa6.94□□□□□ -1.3
TRIM39-202ENST00000376659 C2CD3Q4AC94 2353 aa6.94□□□□□ -1.3
TRIM39-202ENST00000376659 SMIM9A6NGZ8 99 aa6.94□□□□□ -1.3
TRIM39-202ENST00000376659 ODF3L2Q3SX64 289 aa6.94□□□□□ -1.3
TRIM39-202ENST00000376659 TRGV11A0A075B6L2 103 aa6.93□□□□□ -1.3
TRIM39-202ENST00000376659 IGKV3-20P01619 116 aa6.93□□□□□ -1.3
TRIM39-202ENST00000376659 GIG44P09565 113 aaPredicted RBP6.93□□□□□ -1.3
TRIM39-202ENST00000376659 ZNF22P17026 224 aaPredicted RBP6.93□□□□□ -1.3
TRIM39-202ENST00000376659 UBE2D3P61077 147 aa6.93□□□□□ -1.3
TRIM39-202ENST00000376659 UBE2D2P62837 147 aa6.93□□□□□ -1.3
TRIM39-202ENST00000376659 NHP2Q9NX24 153 aaKnown RBP6.93□□□□□ -1.3
TRIM39-202ENST00000376659 RRN3P1Q2M238 152 aa6.93□□□□□ -1.3
TRIM39-202ENST00000376659 KLHL30-AS1Q8NEE0 82 aa6.93□□□□□ -1.3
TRIM39-202ENST00000376659 FOXI1Q12951 378 aa6.93□□□□□ -1.3
TRIM39-202ENST00000376659 GAGE2BQ13066 116 aa6.93□□□□□ -1.3
TRIM39-202ENST00000376659 GAGE2EQ4V326 116 aa6.93□□□□□ -1.3
TRIM39-202ENST00000376659 GAGE2DQ9UEU5 116 aa6.93□□□□□ -1.3
TRIM39-202ENST00000376659 DNAJC9-AS1A6NH13 148 aa6.92□□□□□ -1.3
TRIM39-202ENST00000376659 MRPS36P82909 103 aaKnown RBP6.92□□□□□ -1.3
TRIM39-202ENST00000376659 FAM19A3Q7Z5A8 133 aa6.92□□□□□ -1.3
TRIM39-202ENST00000376659 SLC25A29Q8N8R3 303 aa6.92□□□□□ -1.3
TRIM39-202ENST00000376659 DEFB104AQ8WTQ1 72 aa6.92□□□□□ -1.3
TRIM39-202ENST00000376659 DUX3Q96PT4 197 aa6.92□□□□□ -1.3
TRIM39-202ENST00000376659 KIR2DL4Q99706 377 aa6.92□□□□□ -1.3
TRIM39-202ENST00000376659 PLAC8L1A1L4L8 177 aa6.92□□□□□ -1.3
TRIM39-202ENST00000376659 ADARB2-AS1A8MUL3 147 aa6.92□□□□□ -1.3
TRIM39-202ENST00000376659 I3L3M4 83 aa6.92□□□□□ -1.3
TRIM39-202ENST00000376659 NDUFV3P56181 108 aaKnown RBP6.92□□□□□ -1.3
TRIM39-202ENST00000376659 TRRAPQ9Y4A5 3859 aa6.92□□□□□ -1.3
TRIM39-202ENST00000376659 DNAH1Q9P2D7 4330 aa6.92□□□□□ -1.3
TRIM39-202ENST00000376659 RS1O15537 224 aa6.92□□□□□ -1.3
TRIM39-202ENST00000376659 SMCPP49901 116 aaPredicted RBP6.92□□□□□ -1.3
TRIM39-202ENST00000376659 MRPL23Q16540 153 aaKnown RBP6.92□□□□□ -1.3
TRIM39-202ENST00000376659 DEFB131AP59861 70 aa6.91□□□□□ -1.3
TRIM39-202ENST00000376659 C19orf73Q9NVV2 129 aa6.91□□□□□ -1.3
TRIM39-202ENST00000376659 UBE2D4Q9Y2X8 147 aa6.91□□□□□ -1.3
TRIM39-202ENST00000376659 OTOGQ6ZRI0 2925 aa6.91□□□□□ -1.3
TRIM39-202ENST00000376659 EMP1P54849 157 aa6.91□□□□□ -1.3
TRIM39-202ENST00000376659 C1orf158Q8N1D5 194 aa6.91□□□□□ -1.3
TRIM39-202ENST00000376659 NOTCH2Q04721 2471 aa6.91□□□□□ -1.3
TRIM39-202ENST00000376659 CCDC168Q8NDH2 2452 aa6.91□□□□□ -1.3
TRIM39-202ENST00000376659 M0R2P5 195 aa6.9□□□□□ -1.3
TRIM39-202ENST00000376659 RHODO00212 210 aa6.9□□□□□ -1.3
TRIM39-202ENST00000376659 ZNF56Q15929 161 aa6.9□□□□□ -1.3
TRIM39-202ENST00000376659 PAPPA-AS1Q5QFB9 102 aa6.9□□□□□ -1.3
TRIM39-202ENST00000376659 C10orf126Q8N4M7 172 aa6.9□□□□□ -1.3
TRIM39-202ENST00000376659 C16orf95Q9H693 158 aa6.9□□□□□ -1.3
TRIM39-202ENST00000376659 IGLV5-45A0A087WSX0 123 aa6.9□□□□□ -1.3
TRIM39-202ENST00000376659 ZNF815PA8K554 130 aa6.9□□□□□ -1.3
TRIM39-202ENST00000376659 FAM74A4Q5TZK3 123 aa6.9□□□□□ -1.3
TRIM39-202ENST00000376659 WFDC11Q8NEX6 87 aa6.9□□□□□ -1.3
TRIM39-202ENST00000376659 SONP18583 2426 aaKnown RBP6.9□□□□□ -1.3
TRIM39-202ENST00000376659 LOC107984640A0A0U1RRK4 108 aa6.9□□□□□ -1.31
TRIM39-202ENST00000376659 LEPROTO15243 131 aa6.9□□□□□ -1.31
TRIM39-202ENST00000376659 WNK1Q9H4A3 2382 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms