RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 LINC00612Q8N6U2 182 aa12.57□□□□□ -0.4
CTTN-203ENST00000376561 OR11H2Q8NH07 326 aa12.57□□□□□ -0.4
CTTN-203ENST00000376561 RPL36AP83881 106 aaKnown RBP12.56□□□□□ -0.4
CTTN-203ENST00000376561 RPL36ALQ969Q0 106 aaKnown RBP12.56□□□□□ -0.4
CTTN-203ENST00000376561 PLNP26678 52 aa12.56□□□□□ -0.4
CTTN-203ENST00000376561 TRBV6-4A0A1B0GX49 114 aa12.55□□□□□ -0.4
CTTN-203ENST00000376561 DEFB130BP0DP73 79 aa12.55□□□□□ -0.4
CTTN-203ENST00000376561 DEFB130AP0DP74 79 aa12.55□□□□□ -0.4
CTTN-203ENST00000376561 HNRNPA3P51991 378 aaKnown RBP12.55□□□□□ -0.4
CTTN-203ENST00000376561 COTL1Q14019 142 aa12.55□□□□□ -0.4
CTTN-203ENST00000376561 TP73-AS1Q9UF72 201 aa12.55□□□□□ -0.4
CTTN-203ENST00000376561 TRGV4A0A0C4DH28 118 aa12.54□□□□□ -0.4
CTTN-203ENST00000376561 TCTAP57738 103 aa12.54□□□□□ -0.4
CTTN-203ENST00000376561 SLC25A34Q6PIV7 304 aa12.54□□□□□ -0.4
CTTN-203ENST00000376561 CHCHD7Q9BUK0 85 aa12.54□□□□□ -0.4
CTTN-203ENST00000376561 NBEAL2Q6ZNJ1 2754 aa12.54□□□□□ -0.4
CTTN-203ENST00000376561 COL6A5A8TX70 2615 aa12.54□□□□□ -0.4
CTTN-203ENST00000376561 COX8AP10176 69 aa12.54□□□□□ -0.4
CTTN-203ENST00000376561 CTAG1AP78358 180 aa12.54□□□□□ -0.4
CTTN-203ENST00000376561 FHL2Q14192 279 aa12.54□□□□□ -0.4
CTTN-203ENST00000376561 PMVKQ15126 192 aa12.54□□□□□ -0.4
CTTN-203ENST00000376561 ZC2HC1BQ5TFG8 222 aa12.54□□□□□ -0.4
CTTN-203ENST00000376561 UBE2D3P61077 147 aa12.53□□□□□ -0.4
CTTN-203ENST00000376561 UBE2D2P62837 147 aa12.53□□□□□ -0.4
CTTN-203ENST00000376561 RNF183Q96D59 192 aa12.53□□□□□ -0.4
CTTN-203ENST00000376561 OPRPNQ99935 248 aaPredicted RBP12.53□□□□□ -0.4
CTTN-203ENST00000376561 CST9LQ9H4G1 147 aa12.53□□□□□ -0.4
CTTN-203ENST00000376561 CMYA5Q8N3K9 4069 aa12.53□□□□□ -0.4
CTTN-203ENST00000376561 GAGE12JA6NER3 117 aa12.52□□□□□ -0.41
CTTN-203ENST00000376561 GAGE1Q13065 139 aa12.52□□□□□ -0.41
CTTN-203ENST00000376561 GAGE4Q13068 117 aa12.52□□□□□ -0.41
CTTN-203ENST00000376561 GAGE5Q13069 117 aa12.52□□□□□ -0.41
CTTN-203ENST00000376561 GAGE13Q4V321 117 aa12.52□□□□□ -0.41
CTTN-203ENST00000376561 FAM222AQ5U5X8 452 aa12.52□□□□□ -0.41
CTTN-203ENST00000376561 DAZ4Q86SG3 579 aaKnown RBP12.52□□□□□ -0.41
CTTN-203ENST00000376561 DAZ3Q9NR90 486 aaKnown RBP12.52□□□□□ -0.41
CTTN-203ENST00000376561 PYGO1Q9Y3Y4 419 aa12.52□□□□□ -0.41
CTTN-203ENST00000376561 IGHV4-28A0A0C4DH34 117 aa12.52□□□□□ -0.41
CTTN-203ENST00000376561 LYRM9A8MSI8 78 aa12.52□□□□□ -0.41
CTTN-203ENST00000376561 ZMAT5Q9UDW3 170 aaKnown RBP12.52□□□□□ -0.41
CTTN-203ENST00000376561 MIFP14174 115 aa12.51□□□□□ -0.41
CTTN-203ENST00000376561 SNHG12Q9BXW3 62 aa12.51□□□□□ -0.41
CTTN-203ENST00000376561 PKD1L1Q8TDX9 2849 aa12.51□□□□□ -0.41
CTTN-203ENST00000376561 DEFB4AO15263 64 aa12.5□□□□□ -0.41
CTTN-203ENST00000376561 Q8NAQ8 132 aa12.5□□□□□ -0.41
CTTN-203ENST00000376561 MRPS16Q9Y3D3 137 aaKnown RBP12.5□□□□□ -0.41
CTTN-203ENST00000376561 IGLV4-3A0A075B6K6 122 aa12.5□□□□□ -0.41
CTTN-203ENST00000376561 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.5□□□□□ -0.41
CTTN-203ENST00000376561 LOC100131303A0A0U1RQF7 123 aa12.5□□□□□ -0.41
CTTN-203ENST00000376561 IGKV2-29A2NJV5 120 aaPredicted RBP12.5□□□□□ -0.41
CTTN-203ENST00000376561 G3V4G9 280 aa12.5□□□□□ -0.41
CTTN-203ENST00000376561 M0R143 59 aa12.5□□□□□ -0.41
CTTN-203ENST00000376561 EREGO14944 169 aa12.5□□□□□ -0.41
CTTN-203ENST00000376561 NMUP48645 174 aa12.5□□□□□ -0.41
CTTN-203ENST00000376561 IGLV4-69A0A075B6H9 119 aa12.49□□□□□ -0.41
CTTN-203ENST00000376561 IGKV2D-26A0A0A0MRZ7 120 aa12.49□□□□□ -0.41
CTTN-203ENST00000376561 A8MZ25 164 aa12.49□□□□□ -0.41
CTTN-203ENST00000376561 FGF6P10767 208 aa12.49□□□□□ -0.41
CTTN-203ENST00000376561 MRPL52Q86TS9 123 aaKnown RBP12.49□□□□□ -0.41
CTTN-203ENST00000376561 CEMP1Q6PRD7 247 aaPredicted RBP12.49□□□□□ -0.41
CTTN-203ENST00000376561 PRADC1Q9BSG0 188 aa12.49□□□□□ -0.41
CTTN-203ENST00000376561 UBE2D4Q9Y2X8 147 aa12.49□□□□□ -0.41
CTTN-203ENST00000376561 BOD1L2Q8IYS8 172 aa12.48□□□□□ -0.41
CTTN-203ENST00000376561 FAM104AQ969W3 186 aa12.48□□□□□ -0.41
CTTN-203ENST00000376561 SPANXA1Q9NS26 97 aa12.48□□□□□ -0.41
CTTN-203ENST00000376561 PAPPA-AS1Q5QFB9 102 aa12.47□□□□□ -0.41
CTTN-203ENST00000376561 NTM-AS1Q6ZSK4 140 aa12.47□□□□□ -0.41
CTTN-203ENST00000376561 PCP2Q8IVA1 136 aa12.47□□□□□ -0.41
CTTN-203ENST00000376561 VCX2Q9H322 139 aa12.47□□□□□ -0.41
CTTN-203ENST00000376561 NPSP0C0P6 89 aa12.47□□□□□ -0.41
CTTN-203ENST00000376561 C11orf86A6NJI1 115 aa12.46□□□□□ -0.41
CTTN-203ENST00000376561 DLEU1O43261 78 aa12.45□□□□□ -0.42
CTTN-203ENST00000376561 CRYBA4P53673 196 aa12.45□□□□□ -0.42
CTTN-203ENST00000376561 AMELXQ99217 191 aa12.45□□□□□ -0.42
CTTN-203ENST00000376561 LBHQ53QV2 105 aaPredicted RBP12.45□□□□□ -0.42
CTTN-203ENST00000376561 SAMD5Q5TGI4 173 aa12.45□□□□□ -0.42
CTTN-203ENST00000376561 GTSF1LQ9H1H1 148 aa12.45□□□□□ -0.42
CTTN-203ENST00000376561 LINC00694P0DN24 101 aa12.44□□□□□ -0.42
CTTN-203ENST00000376561 C2orf91Q6ZV80 131 aa12.44□□□□□ -0.42
CTTN-203ENST00000376561 CELA1Q9UNI1 258 aa12.44□□□□□ -0.42
CTTN-203ENST00000376561 DAD1P61803 113 aa12.43□□□□□ -0.42
CTTN-203ENST00000376561 TIMM21Q9BVV7 248 aa12.43□□□□□ -0.42
CTTN-203ENST00000376561 NFE4Q86UQ8 179 aa12.43□□□□□ -0.42
CTTN-203ENST00000376561 TTTY13Q9BZ97 58 aa12.43□□□□□ -0.42
CTTN-203ENST00000376561 PRO0255Q9UI72 69 aa12.43□□□□□ -0.42
CTTN-203ENST00000376561 SPART-AS1P0CW21 52 aa12.42□□□□□ -0.42
CTTN-203ENST00000376561 BATFQ16520 125 aa12.42□□□□□ -0.42
CTTN-203ENST00000376561 RNASE13Q5GAN3 156 aaKnown RBP12.42□□□□□ -0.42
CTTN-203ENST00000376561 SBSPONQ8IVN8 264 aa12.42□□□□□ -0.42
CTTN-203ENST00000376561 C2orf88Q9BSF0 95 aa12.42□□□□□ -0.42
CTTN-203ENST00000376561 Q6ZUT4 128 aa12.42□□□□□ -0.42
CTTN-203ENST00000376561 E9PLD3 99 aa12.41□□□□□ -0.42
CTTN-203ENST00000376561 CHAC1Q9BUX1 264 aa12.41□□□□□ -0.42
CTTN-203ENST00000376561 GYPEP15421 78 aa12.41□□□□□ -0.42
CTTN-203ENST00000376561 HINT1P49773 126 aaPredicted RBP12.41□□□□□ -0.42
CTTN-203ENST00000376561 MRPS36P82909 103 aaKnown RBP12.41□□□□□ -0.42
CTTN-203ENST00000376561 DGAT2L7PQ6IED9 249 aa12.41□□□□□ -0.42
CTTN-203ENST00000376561 ANK2Q01484 3957 aa12.4□□□□□ -0.42
CTTN-203ENST00000376561 TRAV8-6A0A0B4J262 113 aa12.4□□□□□ -0.42
CTTN-203ENST00000376561 A0A0J9YXV3 536 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms