RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 ZSWIM8A7E2V4 1837 aa4.59□□□□□ -1.67
SCN2A-202ENST00000375427 Q6ZRM9 215 aa4.59□□□□□ -1.67
SCN2A-202ENST00000375427 Q6ZS92 163 aa4.59□□□□□ -1.67
SCN2A-202ENST00000375427 ALS2Q96Q42 1657 aa4.59□□□□□ -1.67
SCN2A-202ENST00000375427 BDP1A6H8Y1 2624 aa4.59□□□□□ -1.67
SCN2A-202ENST00000375427 RICTORQ6R327 1708 aa4.59□□□□□ -1.67
SCN2A-202ENST00000375427 C4orf26Q17RF5 130 aa4.59□□□□□ -1.67
SCN2A-202ENST00000375427 DCANP1Q8TF63 244 aa4.59□□□□□ -1.67
SCN2A-202ENST00000375427 LRP6O75581 1613 aa4.59□□□□□ -1.67
SCN2A-202ENST00000375427 VMO1Q7Z5L0 202 aa4.59□□□□□ -1.67
SCN2A-202ENST00000375427 CDPF1Q6NVV7 123 aa4.59□□□□□ -1.67
SCN2A-202ENST00000375427 IGKV1D-17A0A075B6S4 117 aa4.59□□□□□ -1.68
SCN2A-202ENST00000375427 CYP4F30PQ9H0H9 118 aa4.59□□□□□ -1.68
SCN2A-202ENST00000375427 SPART-AS1P0CW21 52 aa4.58□□□□□ -1.68
SCN2A-202ENST00000375427 SMIM10L1P0DMW3 83 aa4.58□□□□□ -1.68
SCN2A-202ENST00000375427 C11orf53Q8IXP5 236 aa4.58□□□□□ -1.68
SCN2A-202ENST00000375427 SMIM10Q96HG1 83 aa4.58□□□□□ -1.68
SCN2A-202ENST00000375427 C5P01031 1676 aa4.58□□□□□ -1.68
SCN2A-202ENST00000375427 KLK5Q9Y337 293 aaPredicted RBP4.58□□□□□ -1.68
SCN2A-202ENST00000375427 IGLV1-36A0A0B4J1U3 117 aa4.58□□□□□ -1.68
SCN2A-202ENST00000375427 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.58□□□□□ -1.68
SCN2A-202ENST00000375427 CYYR1Q96J86 154 aa4.58□□□□□ -1.68
SCN2A-202ENST00000375427 ARID2Q68CP9 1835 aa4.58□□□□□ -1.68
SCN2A-202ENST00000375427 AVPP01185 164 aa4.58□□□□□ -1.68
SCN2A-202ENST00000375427 KIAA1671Q9BY89 1806 aa4.58□□□□□ -1.68
SCN2A-202ENST00000375427 IGKV1D-8A0A087WSZ0 117 aa4.58□□□□□ -1.68
SCN2A-202ENST00000375427 LINC00483Q53H64 154 aa4.58□□□□□ -1.68
SCN2A-202ENST00000375427 RREB1Q92766 1687 aa4.57□□□□□ -1.68
SCN2A-202ENST00000375427 MRPS12O15235 138 aaKnown RBP4.57□□□□□ -1.68
SCN2A-202ENST00000375427 IGHV3-30-3P0DP02 117 aa4.57□□□□□ -1.68
SCN2A-202ENST00000375427 PCOTHQ58A44 107 aa4.57□□□□□ -1.68
SCN2A-202ENST00000375427 OVOL3O00110 214 aa4.57□□□□□ -1.68
SCN2A-202ENST00000375427 CCL24O00175 119 aa4.57□□□□□ -1.68
SCN2A-202ENST00000375427 C10orf91Q5T1B1 145 aa4.57□□□□□ -1.68
SCN2A-202ENST00000375427 LINC00308Q8TCZ7 52 aa4.57□□□□□ -1.68
SCN2A-202ENST00000375427 HHLA3Q9XRX5 114 aa4.57□□□□□ -1.68
SCN2A-202ENST00000375427 KCPQ6ZWJ8 1503 aa4.57□□□□□ -1.68
SCN2A-202ENST00000375427 H7C423 109 aa4.57□□□□□ -1.68
SCN2A-202ENST00000375427 IGKV1D-16P01601 117 aa4.57□□□□□ -1.68
SCN2A-202ENST00000375427 IGKV1-16P04430 117 aa4.57□□□□□ -1.68
SCN2A-202ENST00000375427 CELA3BP08861 270 aa4.57□□□□□ -1.68
SCN2A-202ENST00000375427 C17orf82Q86X59 251 aaPredicted RBP4.57□□□□□ -1.68
SCN2A-202ENST00000375427 VOPP1Q96AW1 172 aa4.57□□□□□ -1.68
SCN2A-202ENST00000375427 A0A0J9YXV3 536 aa4.57□□□□□ -1.68
SCN2A-202ENST00000375427 SPTBN4Q9H254 2564 aa4.57□□□□□ -1.68
SCN2A-202ENST00000375427 TP73-AS1Q9UF72 201 aa4.57□□□□□ -1.68
SCN2A-202ENST00000375427 KDM3BQ7LBC6 1761 aa4.57□□□□□ -1.68
SCN2A-202ENST00000375427 FOXS1O43638 330 aa4.56□□□□□ -1.68
SCN2A-202ENST00000375427 Q8N3U1 123 aa4.56□□□□□ -1.68
SCN2A-202ENST00000375427 FAM120AOSQ5T036 256 aa4.56□□□□□ -1.68
SCN2A-202ENST00000375427 PKD1L3Q7Z443 1732 aa4.56□□□□□ -1.68
SCN2A-202ENST00000375427 IGLV3-32A0A0A0MS00 114 aa4.56□□□□□ -1.68
SCN2A-202ENST00000375427 UQCR11O14957 56 aa4.56□□□□□ -1.68
SCN2A-202ENST00000375427 Q6ZTC4 211 aa4.56□□□□□ -1.68
SCN2A-202ENST00000375427 TP53AIP1Q9HCN2 124 aa4.56□□□□□ -1.68
SCN2A-202ENST00000375427 IBA57-AS1B1ANH7 110 aa4.56□□□□□ -1.68
SCN2A-202ENST00000375427 ELOF1P60002 83 aaKnown RBP4.56□□□□□ -1.68
SCN2A-202ENST00000375427 IGFL4Q6B9Z1 124 aa4.56□□□□□ -1.68
SCN2A-202ENST00000375427 SSC5DA1L4H1 1573 aa4.56□□□□□ -1.68
SCN2A-202ENST00000375427 ANKHD1Q8IWZ3 2542 aaKnown RBP4.56□□□□□ -1.68
SCN2A-202ENST00000375427 H3BUX3 64 aa4.56□□□□□ -1.68
SCN2A-202ENST00000375427 RFPL3SP0C7P2 107 aa4.56□□□□□ -1.68
SCN2A-202ENST00000375427 C6orf48Q9UBA6 75 aa4.56□□□□□ -1.68
SCN2A-202ENST00000375427 TRBV6-5A0A0K0K1A5 114 aa4.56□□□□□ -1.68
SCN2A-202ENST00000375427 RPL39LQ96EH5 51 aaKnown RBP4.56□□□□□ -1.68
SCN2A-202ENST00000375427 PIN1P1O15428 100 aa4.56□□□□□ -1.68
SCN2A-202ENST00000375427 GNRH2O43555 120 aa4.56□□□□□ -1.68
SCN2A-202ENST00000375427 ZNF702PQ9H963 129 aa4.56□□□□□ -1.68
SCN2A-202ENST00000375427 IGLV5-45A0A087WSX0 123 aa4.55□□□□□ -1.68
SCN2A-202ENST00000375427 IGKV2-24A0A0C4DH68 120 aa4.55□□□□□ -1.68
SCN2A-202ENST00000375427 IGF2RP11717 2491 aa4.55□□□□□ -1.68
SCN2A-202ENST00000375427 TNFRSF13BO14836 293 aaPredicted RBP4.55□□□□□ -1.68
SCN2A-202ENST00000375427 REG3AQ06141 175 aa4.55□□□□□ -1.68
SCN2A-202ENST00000375427 FOXL2NBQ6ZUU3 175 aa4.55□□□□□ -1.68
SCN2A-202ENST00000375427 DEFB124Q8NES8 71 aa4.55□□□□□ -1.68
SCN2A-202ENST00000375427 TRBV6-1A0A0K0K1D8 114 aa4.55□□□□□ -1.68
SCN2A-202ENST00000375427 M0R378 163 aa4.55□□□□□ -1.68
SCN2A-202ENST00000375427 SLPIP03973 132 aa4.55□□□□□ -1.68
SCN2A-202ENST00000375427 CRIP2P52943 208 aaPredicted RBP4.55□□□□□ -1.68
SCN2A-202ENST00000375427 FHL2Q14192 279 aa4.55□□□□□ -1.68
SCN2A-202ENST00000375427 C1orf64Q8NEQ6 169 aa4.55□□□□□ -1.68
SCN2A-202ENST00000375427 IL17DQ8TAD2 202 aa4.55□□□□□ -1.68
SCN2A-202ENST00000375427 TDRG1Q3Y452 100 aa4.55□□□□□ -1.68
SCN2A-202ENST00000375427 ZFAND2AQ8N6M9 145 aa4.55□□□□□ -1.68
SCN2A-202ENST00000375427 CDC42SE1Q9NRR8 79 aa4.55□□□□□ -1.68
SCN2A-202ENST00000375427 B4DSR2 109 aa4.55□□□□□ -1.68
SCN2A-202ENST00000375427 NFE4Q86UQ8 179 aa4.54□□□□□ -1.68
SCN2A-202ENST00000375427 TMEM105Q8N8V8 129 aa4.54□□□□□ -1.68
SCN2A-202ENST00000375427 C9orf116Q5BN46 136 aaPredicted RBP4.54□□□□□ -1.68
SCN2A-202ENST00000375427 PAQR4Q8N4S7 273 aaPredicted RBP4.54□□□□□ -1.68
SCN2A-202ENST00000375427 ABCA3Q99758 1704 aa4.54□□□□□ -1.68
SCN2A-202ENST00000375427 TRBV6-6A0A0A6YYG2 114 aa4.54□□□□□ -1.68
SCN2A-202ENST00000375427 IGHV6-1A0A0B4J1U7 121 aa4.54□□□□□ -1.68
SCN2A-202ENST00000375427 F8W735 103 aaPredicted RBP4.54□□□□□ -1.68
SCN2A-202ENST00000375427 AMELYQ99218 206 aa4.54□□□□□ -1.68
SCN2A-202ENST00000375427 KLK12Q9UKR0 248 aa4.54□□□□□ -1.68
SCN2A-202ENST00000375427 LTBP4Q8N2S1 1624 aa4.54□□□□□ -1.68
SCN2A-202ENST00000375427 LINC01555Q8NAE3 123 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 LY6DQ14210 128 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 PHLPP1O60346 1717 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms