RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 PAPPA-AS1Q5QFB9 102 aa12.89□□□□□ -0.35
HLA-DQB1-201ENST00000374943 ZNF479Q96JC4 524 aa12.89□□□□□ -0.35
HLA-DQB1-201ENST00000374943 CST9LQ9H4G1 147 aa12.89□□□□□ -0.35
HLA-DQB1-201ENST00000374943 HINT1P49773 126 aaPredicted RBP12.88□□□□□ -0.35
HLA-DQB1-201ENST00000374943 PCP2Q8IVA1 136 aa12.88□□□□□ -0.35
HLA-DQB1-201ENST00000374943 PYGO1Q9Y3Y4 419 aa12.88□□□□□ -0.35
HLA-DQB1-201ENST00000374943 NPSP0C0P6 89 aa12.87□□□□□ -0.35
HLA-DQB1-201ENST00000374943 TCTAP57738 103 aa12.87□□□□□ -0.35
HLA-DQB1-201ENST00000374943 C12orf54Q6X4T0 127 aa12.87□□□□□ -0.35
HLA-DQB1-201ENST00000374943 IGLV4-69A0A075B6H9 119 aa12.86□□□□□ -0.35
HLA-DQB1-201ENST00000374943 K7EQD1 137 aa12.86□□□□□ -0.35
HLA-DQB1-201ENST00000374943 MPV17L2Q567V2 206 aa12.86□□□□□ -0.35
HLA-DQB1-201ENST00000374943 CHCHD7Q9BUK0 85 aa12.86□□□□□ -0.35
HLA-DQB1-201ENST00000374943 TRBV7-3A0A075B6L6 115 aa12.85□□□□□ -0.35
HLA-DQB1-201ENST00000374943 CRYBA4P53673 196 aa12.85□□□□□ -0.35
HLA-DQB1-201ENST00000374943 KIR2DL5BQ8NHK3 375 aa12.85□□□□□ -0.35
HLA-DQB1-201ENST00000374943 IGLV4-3A0A075B6K6 122 aa12.84□□□□□ -0.35
HLA-DQB1-201ENST00000374943 SMIM9A6NGZ8 99 aa12.84□□□□□ -0.35
HLA-DQB1-201ENST00000374943 COTL1Q14019 142 aa12.84□□□□□ -0.35
HLA-DQB1-201ENST00000374943 BVES-AS1Q5T3Y7 98 aa12.84□□□□□ -0.35
HLA-DQB1-201ENST00000374943 COL6A5A8TX70 2615 aa12.84□□□□□ -0.35
HLA-DQB1-201ENST00000374943 GAGE12BA1L429 117 aa12.83□□□□□ -0.35
HLA-DQB1-201ENST00000374943 GAGE7O76087 117 aa12.83□□□□□ -0.35
HLA-DQB1-201ENST00000374943 GAGE12FP0CL80 117 aa12.83□□□□□ -0.35
HLA-DQB1-201ENST00000374943 GAGE12GP0CL81 117 aa12.83□□□□□ -0.35
HLA-DQB1-201ENST00000374943 GAGE12IP0CL82 117 aa12.83□□□□□ -0.35
HLA-DQB1-201ENST00000374943 RPL36AP83881 106 aaKnown RBP12.83□□□□□ -0.35
HLA-DQB1-201ENST00000374943 TMEM97Q5BJF2 176 aa12.83□□□□□ -0.35
HLA-DQB1-201ENST00000374943 RPL36ALQ969Q0 106 aaKnown RBP12.83□□□□□ -0.35
HLA-DQB1-201ENST00000374943 HIGD1BQ9P298 99 aa12.83□□□□□ -0.35
HLA-DQB1-201ENST00000374943 FBN1P35555 2871 aaKnown RBP12.83□□□□□ -0.36
HLA-DQB1-201ENST00000374943 TRGV2A0A075B6R0 118 aa12.83□□□□□ -0.36
HLA-DQB1-201ENST00000374943 C11orf86A6NJI1 115 aa12.83□□□□□ -0.36
HLA-DQB1-201ENST00000374943 E9PLD3 99 aa12.83□□□□□ -0.36
HLA-DQB1-201ENST00000374943 KRTAP24-1Q3LI83 254 aa12.83□□□□□ -0.36
HLA-DQB1-201ENST00000374943 SPANXA1Q9NS26 97 aa12.83□□□□□ -0.36
HLA-DQB1-201ENST00000374943 NFE4Q86UQ8 179 aa12.82□□□□□ -0.36
HLA-DQB1-201ENST00000374943 LINC00612Q8N6U2 182 aa12.82□□□□□ -0.36
HLA-DQB1-201ENST00000374943 SLC25A29Q8N8R3 303 aa12.82□□□□□ -0.36
HLA-DQB1-201ENST00000374943 ZNRF2Q8NHG8 242 aa12.82□□□□□ -0.36
HLA-DQB1-201ENST00000374943 X6R8D5 127 aa12.82□□□□□ -0.36
HLA-DQB1-201ENST00000374943 TRBV6-4A0A1B0GX49 114 aa12.81□□□□□ -0.36
HLA-DQB1-201ENST00000374943 APOC4P55056 127 aa12.81□□□□□ -0.36
HLA-DQB1-201ENST00000374943 DAZ4Q86SG3 579 aaKnown RBP12.81□□□□□ -0.36
HLA-DQB1-201ENST00000374943 PHLDA1Q8WV24 401 aaPredicted RBP12.81□□□□□ -0.36
HLA-DQB1-201ENST00000374943 FAM104AQ969W3 186 aa12.81□□□□□ -0.36
HLA-DQB1-201ENST00000374943 AMELXQ99217 191 aa12.81□□□□□ -0.36
HLA-DQB1-201ENST00000374943 OPRPNQ99935 248 aaPredicted RBP12.81□□□□□ -0.36
HLA-DQB1-201ENST00000374943 DAZ3Q9NR90 486 aaKnown RBP12.81□□□□□ -0.36
HLA-DQB1-201ENST00000374943 UBE2D3P61077 147 aa12.8□□□□□ -0.36
HLA-DQB1-201ENST00000374943 UBE2D2P62837 147 aa12.8□□□□□ -0.36
HLA-DQB1-201ENST00000374943 HSD52Q0P140 79 aa12.8□□□□□ -0.36
HLA-DQB1-201ENST00000374943 UBE2D4Q9Y2X8 147 aa12.8□□□□□ -0.36
HLA-DQB1-201ENST00000374943 IGHV3-38A0A0C4DH36 116 aa12.8□□□□□ -0.36
HLA-DQB1-201ENST00000374943 OR11H2Q8NH07 326 aa12.8□□□□□ -0.36
HLA-DQB1-201ENST00000374943 TTTY13Q9BZ97 58 aa12.8□□□□□ -0.36
HLA-DQB1-201ENST00000374943 VCX2Q9H322 139 aa12.8□□□□□ -0.36
HLA-DQB1-201ENST00000374943 TIMM21Q9BVV7 248 aa12.79□□□□□ -0.36
HLA-DQB1-201ENST00000374943 TRBV25-1A0A075B6N4 114 aa12.78□□□□□ -0.36
HLA-DQB1-201ENST00000374943 HERVK_113P61574 105 aa12.78□□□□□ -0.36
HLA-DQB1-201ENST00000374943 STAB1Q9NY15 2570 aa12.77□□□□□ -0.36
HLA-DQB1-201ENST00000374943 TRAV8-6A0A0B4J262 113 aa12.77□□□□□ -0.36
HLA-DQB1-201ENST00000374943 MAPKAPK5-AS1Q8N8E1 139 aa12.77□□□□□ -0.36
HLA-DQB1-201ENST00000374943 PRADC1Q9BSG0 188 aa12.77□□□□□ -0.36
HLA-DQB1-201ENST00000374943 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.77□□□□□ -0.37
HLA-DQB1-201ENST00000374943 IGKV2-29A2NJV5 120 aaPredicted RBP12.77□□□□□ -0.37
HLA-DQB1-201ENST00000374943 EMP1P54849 157 aa12.77□□□□□ -0.37
HLA-DQB1-201ENST00000374943 SEC11AP67812 179 aa12.77□□□□□ -0.37
HLA-DQB1-201ENST00000374943 FHL2Q14192 279 aa12.77□□□□□ -0.37
HLA-DQB1-201ENST00000374943 CHAC1Q9BUX1 264 aa12.77□□□□□ -0.37
HLA-DQB1-201ENST00000374943 TRRAPQ9Y4A5 3859 aa12.76□□□□□ -0.37
HLA-DQB1-201ENST00000374943 TRGV4A0A0C4DH28 118 aa12.76□□□□□ -0.37
HLA-DQB1-201ENST00000374943 MRPS36P82909 103 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB1-201ENST00000374943 ZMAT5Q9UDW3 170 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB1-201ENST00000374943 MYMXA0A1B0GTQ4 84 aa12.75□□□□□ -0.37
HLA-DQB1-201ENST00000374943 GAGE12JA6NER3 117 aa12.75□□□□□ -0.37
HLA-DQB1-201ENST00000374943 GAGE1Q13065 139 aa12.75□□□□□ -0.37
HLA-DQB1-201ENST00000374943 GAGE4Q13068 117 aa12.75□□□□□ -0.37
HLA-DQB1-201ENST00000374943 GAGE5Q13069 117 aa12.75□□□□□ -0.37
HLA-DQB1-201ENST00000374943 GAGE13Q4V321 117 aa12.75□□□□□ -0.37
HLA-DQB1-201ENST00000374943 GTSF1LQ9H1H1 148 aa12.75□□□□□ -0.37
HLA-DQB1-201ENST00000374943 CEMP1Q6PRD7 247 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB1-201ENST00000374943 ORAOV1Q8WV07 137 aa12.74□□□□□ -0.37
HLA-DQB1-201ENST00000374943 LYRM9A8MSI8 78 aa12.73□□□□□ -0.37
HLA-DQB1-201ENST00000374943 LINC00694P0DN24 101 aa12.73□□□□□ -0.37
HLA-DQB1-201ENST00000374943 DEFB135Q30KP9 77 aa12.73□□□□□ -0.37
HLA-DQB1-201ENST00000374943 TMEM170BQ5T4T1 132 aa12.73□□□□□ -0.37
HLA-DQB1-201ENST00000374943 SHISA2Q6UWI4 295 aa12.73□□□□□ -0.37
HLA-DQB1-201ENST00000374943 SBSPONQ8IVN8 264 aa12.73□□□□□ -0.37
HLA-DQB1-201ENST00000374943 ZNF22P17026 224 aaPredicted RBP12.73□□□□□ -0.37
HLA-DQB1-201ENST00000374943 NTM-AS1Q6ZSK4 140 aa12.73□□□□□ -0.37
HLA-DQB1-201ENST00000374943 CSDC2Q9Y534 153 aaKnown RBP12.73□□□□□ -0.37
HLA-DQB1-201ENST00000374943 A0A0J9YXV3 536 aa12.72□□□□□ -0.37
HLA-DQB1-201ENST00000374943 TMEM223A0PJW6 202 aa12.72□□□□□ -0.37
HLA-DQB1-201ENST00000374943 TAL2Q16559 108 aa12.72□□□□□ -0.37
HLA-DQB1-201ENST00000374943 Q6ZUT4 128 aa12.72□□□□□ -0.37
HLA-DQB1-201ENST00000374943 IGHV4-30-4P0DP06 118 aa12.71□□□□□ -0.37
HLA-DQB1-201ENST00000374943 ZNF25P17030 456 aaPredicted RBP12.71□□□□□ -0.37
HLA-DQB1-201ENST00000374943 SMAGPQ0VAQ4 97 aa12.71□□□□□ -0.37
HLA-DQB1-201ENST00000374943 C3orf56Q8N813 242 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms