RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 TIMM17AQ99595 171 aa12.46□□□□□ -0.42
RXRB-201ENST00000374680 TRAV8-3A0A0A6YYJ7 113 aa12.45□□□□□ -0.42
RXRB-201ENST00000374680 TRBV6-5A0A0K0K1A5 114 aa12.45□□□□□ -0.42
RXRB-201ENST00000374680 TRAV2A0A0B4J234 112 aa12.45□□□□□ -0.42
RXRB-201ENST00000374680 TAL2Q16559 108 aa12.45□□□□□ -0.42
RXRB-201ENST00000374680 PSMB2P49721 201 aa12.44□□□□□ -0.42
RXRB-201ENST00000374680 NPC2P61916 151 aa12.44□□□□□ -0.42
RXRB-201ENST00000374680 PEMTQ9UBM1 199 aa12.44□□□□□ -0.42
RXRB-201ENST00000374680 DEFB114Q30KQ6 69 aa12.44□□□□□ -0.42
RXRB-201ENST00000374680 ZNF418Q8TF45 676 aaPredicted RBP12.44□□□□□ -0.42
RXRB-201ENST00000374680 IGLV4-3A0A075B6K6 122 aa12.44□□□□□ -0.42
RXRB-201ENST00000374680 RAX2Q96IS3 184 aa12.43□□□□□ -0.42
RXRB-201ENST00000374680 G3V4G9 280 aa12.43□□□□□ -0.42
RXRB-201ENST00000374680 GCN1Q92616 2671 aaKnown RBP12.42□□□□□ -0.42
RXRB-201ENST00000374680 WFDC10AQ9H1F0 79 aa12.42□□□□□ -0.42
RXRB-201ENST00000374680 ESM1Q9NQ30 184 aa12.42□□□□□ -0.42
RXRB-201ENST00000374680 INSL3P51460 131 aa12.42□□□□□ -0.42
RXRB-201ENST00000374680 RPL32P62910 135 aaKnown RBP12.42□□□□□ -0.42
RXRB-201ENST00000374680 M0R2P5 195 aa12.41□□□□□ -0.42
RXRB-201ENST00000374680 PRSS2P07478 247 aa12.41□□□□□ -0.42
RXRB-201ENST00000374680 KRTAP1-3Q8IUG1 177 aa12.41□□□□□ -0.42
RXRB-201ENST00000374680 DNAJC9-AS1A6NH13 148 aa12.41□□□□□ -0.42
RXRB-201ENST00000374680 ZNF22P17026 224 aaPredicted RBP12.41□□□□□ -0.42
RXRB-201ENST00000374680 GAGE13Q4V321 117 aa12.41□□□□□ -0.42
RXRB-201ENST00000374680 PAPPA-AS1Q5QFB9 102 aa12.41□□□□□ -0.42
RXRB-201ENST00000374680 CFAP126Q5VTH2 177 aa12.41□□□□□ -0.42
RXRB-201ENST00000374680 C4orf3Q8WVX3 66 aa12.41□□□□□ -0.42
RXRB-201ENST00000374680 A0A1B0GWB2 263 aa12.4□□□□□ -0.42
RXRB-201ENST00000374680 PTH2Q96A98 100 aa12.4□□□□□ -0.42
RXRB-201ENST00000374680 TRGV1A0A0A0MS02 117 aa12.4□□□□□ -0.42
RXRB-201ENST00000374680 TSPAN13O95857 204 aa12.4□□□□□ -0.42
RXRB-201ENST00000374680 NSUN5P1Q3KNT7 163 aa12.4□□□□□ -0.42
RXRB-201ENST00000374680 CITED2Q99967 270 aaPredicted RBP12.4□□□□□ -0.42
RXRB-201ENST00000374680 RHODO00212 210 aa12.39□□□□□ -0.43
RXRB-201ENST00000374680 SCGB1C2P0DMR2 95 aa12.39□□□□□ -0.43
RXRB-201ENST00000374680 ZNF415Q09FC8 603 aa12.39□□□□□ -0.43
RXRB-201ENST00000374680 RHOHQ15669 191 aa12.39□□□□□ -0.43
RXRB-201ENST00000374680 ODF3L2Q3SX64 289 aa12.39□□□□□ -0.43
RXRB-201ENST00000374680 STHQ8IWL8 128 aa12.39□□□□□ -0.43
RXRB-201ENST00000374680 RNF152Q8N8N0 203 aa12.39□□□□□ -0.43
RXRB-201ENST00000374680 PLA2G2AP14555 144 aa12.39□□□□□ -0.43
RXRB-201ENST00000374680 A0A0U1RRA0 63 aa12.38□□□□□ -0.43
RXRB-201ENST00000374680 TMEM238LA0A1B0GVL6 79 aa12.38□□□□□ -0.43
RXRB-201ENST00000374680 A6NJY4 79 aa12.38□□□□□ -0.43
RXRB-201ENST00000374680 SPINK8P0C7L1 97 aa12.38□□□□□ -0.43
RXRB-201ENST00000374680 CFC1BP0CG36 223 aa12.38□□□□□ -0.43
RXRB-201ENST00000374680 CFC1P0CG37 223 aa12.38□□□□□ -0.43
RXRB-201ENST00000374680 LINC00467Q9BRT7 94 aa12.38□□□□□ -0.43
RXRB-201ENST00000374680 TMEM223A0PJW6 202 aa12.38□□□□□ -0.43
RXRB-201ENST00000374680 UNC79Q9P2D8 2635 aa12.38□□□□□ -0.43
RXRB-201ENST00000374680 A4D1N5 150 aa12.37□□□□□ -0.43
RXRB-201ENST00000374680 CCL24O00175 119 aa12.37□□□□□ -0.43
RXRB-201ENST00000374680 IGHV3-30P01768 117 aa12.37□□□□□ -0.43
RXRB-201ENST00000374680 IGHV3-30-5P0DP03 117 aa12.37□□□□□ -0.43
RXRB-201ENST00000374680 RPL35AP18077 110 aaKnown RBP12.37□□□□□ -0.43
RXRB-201ENST00000374680 AMELXQ99217 191 aa12.37□□□□□ -0.43
RXRB-201ENST00000374680 YAE1D1Q9NRH1 226 aa12.37□□□□□ -0.43
RXRB-201ENST00000374680 NDUFA7O95182 113 aa12.37□□□□□ -0.43
RXRB-201ENST00000374680 NDUFA11Q86Y39 141 aa12.37□□□□□ -0.43
RXRB-201ENST00000374680 SLC25A29Q8N8R3 303 aa12.37□□□□□ -0.43
RXRB-201ENST00000374680 A8MWV9 139 aa12.36□□□□□ -0.43
RXRB-201ENST00000374680 Q6ZUT4 128 aa12.36□□□□□ -0.43
RXRB-201ENST00000374680 MUSTN1Q8IVN3 82 aa12.36□□□□□ -0.43
RXRB-201ENST00000374680 FAM104AQ969W3 186 aa12.36□□□□□ -0.43
RXRB-201ENST00000374680 INSP01308 110 aa12.36□□□□□ -0.43
RXRB-201ENST00000374680 GTSF1LQ9H1H1 148 aa12.36□□□□□ -0.43
RXRB-201ENST00000374680 C10orf126Q8N4M7 172 aa12.35□□□□□ -0.43
RXRB-201ENST00000374680 IGHV3-30-3P0DP02 117 aa12.35□□□□□ -0.43
RXRB-201ENST00000374680 UBE2D1P51668 147 aa12.35□□□□□ -0.43
RXRB-201ENST00000374680 DGAT2L7PQ6IED9 249 aa12.35□□□□□ -0.43
RXRB-201ENST00000374680 DAND5Q8N907 189 aa12.35□□□□□ -0.43
RXRB-201ENST00000374680 C11orf72Q8NBR9 251 aa12.35□□□□□ -0.43
RXRB-201ENST00000374680 SPANXB1Q9NS25 103 aaPredicted RBP12.35□□□□□ -0.43
RXRB-201ENST00000374680 PDZD2O15018 2839 aa12.35□□□□□ -0.43
RXRB-201ENST00000374680 ZNF625Q96I27 306 aaPredicted RBP12.34□□□□□ -0.43
RXRB-201ENST00000374680 TSSC4Q9Y5U2 329 aaPredicted RBP12.34□□□□□ -0.43
RXRB-201ENST00000374680 VWFP04275 2813 aa12.34□□□□□ -0.43
RXRB-201ENST00000374680 Q6ZTI0 123 aa12.34□□□□□ -0.43
RXRB-201ENST00000374680 NFE4Q86UQ8 179 aa12.34□□□□□ -0.43
RXRB-201ENST00000374680 Q8N2B8 174 aa12.34□□□□□ -0.43
RXRB-201ENST00000374680 TIMM21Q9BVV7 248 aa12.34□□□□□ -0.43
RXRB-201ENST00000374680 C1orf158Q8N1D5 194 aa12.34□□□□□ -0.43
RXRB-201ENST00000374680 F8W1H4 67 aa12.33□□□□□ -0.44
RXRB-201ENST00000374680 LEPROTO15243 131 aa12.33□□□□□ -0.44
RXRB-201ENST00000374680 Q1RN00 199 aa12.33□□□□□ -0.44
RXRB-201ENST00000374680 CHCHD7Q9BUK0 85 aa12.33□□□□□ -0.44
RXRB-201ENST00000374680 SMR3AQ99954 134 aa12.33□□□□□ -0.44
RXRB-201ENST00000374680 NOP10Q9NPE3 64 aaKnown RBP12.32□□□□□ -0.44
RXRB-201ENST00000374680 TCL1BO95988 128 aa12.31□□□□□ -0.44
RXRB-201ENST00000374680 TMEM238C9JI98 176 aa12.31□□□□□ -0.44
RXRB-201ENST00000374680 EIF4EBP3O60516 100 aaPredicted RBP12.31□□□□□ -0.44
RXRB-201ENST00000374680 GEMIN7Q9H840 131 aaKnown RBP12.31□□□□□ -0.44
RXRB-201ENST00000374680 GAGE12JA6NER3 117 aa12.31□□□□□ -0.44
RXRB-201ENST00000374680 GAGE4Q13068 117 aa12.31□□□□□ -0.44
RXRB-201ENST00000374680 GAGE5Q13069 117 aa12.31□□□□□ -0.44
RXRB-201ENST00000374680 IGKV3OR2-268A0A0C4DH90 116 aa12.3□□□□□ -0.44
RXRB-201ENST00000374680 A0A0J9YXY3 114 aa12.3□□□□□ -0.44
RXRB-201ENST00000374680 SMCPP49901 116 aaPredicted RBP12.3□□□□□ -0.44
RXRB-201ENST00000374680 ADAMTSL4-AS1Q5T5F5 129 aa12.3□□□□□ -0.44
RXRB-201ENST00000374680 PRO1854Q9UHT4 67 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms