RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 AMELXQ99217 191 aa12.5□□□□□ -0.41
PHF1-202ENST00000374516 TRBV7-9A0A0J9YWB2 115 aa12.49□□□□□ -0.41
PHF1-202ENST00000374516 ZNF876PQ49A33 203 aa12.49□□□□□ -0.41
PHF1-202ENST00000374516 TMEM86BQ8N661 226 aa12.49□□□□□ -0.41
PHF1-202ENST00000374516 TEX29Q8N6K0 151 aa12.49□□□□□ -0.41
PHF1-202ENST00000374516 MUC4Q99102 2169 aa12.48□□□□□ -0.41
PHF1-202ENST00000374516 J3QQQ9 107 aa12.48□□□□□ -0.41
PHF1-202ENST00000374516 K7EQG2 157 aa12.48□□□□□ -0.41
PHF1-202ENST00000374516 SNRPD3P62318 126 aaKnown RBP12.48□□□□□ -0.41
PHF1-202ENST00000374516 ANKRD29Q8N6D5 301 aa12.48□□□□□ -0.41
PHF1-202ENST00000374516 A0A087WWL8 130 aa12.47□□□□□ -0.41
PHF1-202ENST00000374516 SDHAF1A6NFY7 115 aa12.47□□□□□ -0.41
PHF1-202ENST00000374516 F5H697 171 aa12.47□□□□□ -0.41
PHF1-202ENST00000374516 WNK1Q9H4A3 2382 aa12.47□□□□□ -0.41
PHF1-202ENST00000374516 FAM159AQ6UWV7 190 aa12.46□□□□□ -0.41
PHF1-202ENST00000374516 TRBV27A0A0K0K1C4 114 aa12.46□□□□□ -0.41
PHF1-202ENST00000374516 LGALS3P17931 250 aaKnown RBP12.46□□□□□ -0.41
PHF1-202ENST00000374516 RAX2Q96IS3 184 aa12.46□□□□□ -0.41
PHF1-202ENST00000374516 SMR3AQ99954 134 aa12.46□□□□□ -0.41
PHF1-202ENST00000374516 KLLNB2CW77 178 aa12.45□□□□□ -0.42
PHF1-202ENST00000374516 C4orf3Q8WVX3 66 aa12.45□□□□□ -0.42
PHF1-202ENST00000374516 TRAV12-2A0A075B6T6 113 aa12.45□□□□□ -0.42
PHF1-202ENST00000374516 TRAV12-3A0A0B4J271 114 aa12.45□□□□□ -0.42
PHF1-202ENST00000374516 A4D1N5 150 aa12.45□□□□□ -0.42
PHF1-202ENST00000374516 A0A0J9YX75 114 aa12.44□□□□□ -0.42
PHF1-202ENST00000374516 A0A1W2PRX2 142 aa12.44□□□□□ -0.42
PHF1-202ENST00000374516 TMEM262E9PQX1 116 aa12.44□□□□□ -0.42
PHF1-202ENST00000374516 SLC25A20O43772 301 aa12.44□□□□□ -0.42
PHF1-202ENST00000374516 ERG28Q9UKR5 140 aa12.44□□□□□ -0.42
PHF1-202ENST00000374516 TRBV6-5A0A0K0K1A5 114 aa12.43□□□□□ -0.42
PHF1-202ENST00000374516 EIF4EBP3O60516 100 aaPredicted RBP12.43□□□□□ -0.42
PHF1-202ENST00000374516 OTOGQ6ZRI0 2925 aa12.43□□□□□ -0.42
PHF1-202ENST00000374516 HIVEP2P31629 2446 aa12.43□□□□□ -0.42
PHF1-202ENST00000374516 IGHV3-33P01772 117 aa12.43□□□□□ -0.42
PHF1-202ENST00000374516 RNF183Q96D59 192 aa12.43□□□□□ -0.42
PHF1-202ENST00000374516 OPRPNQ99935 248 aaPredicted RBP12.43□□□□□ -0.42
PHF1-202ENST00000374516 ZNF256Q9Y2P7 627 aaPredicted RBP12.43□□□□□ -0.42
PHF1-202ENST00000374516 TMEM223A0PJW6 202 aa12.42□□□□□ -0.42
PHF1-202ENST00000374516 C9JAW5 83 aa12.42□□□□□ -0.42
PHF1-202ENST00000374516 LEPROTO15243 131 aa12.42□□□□□ -0.42
PHF1-202ENST00000374516 TRPT1Q86TN4 253 aaKnown RBP12.42□□□□□ -0.42
PHF1-202ENST00000374516 TMEM263Q8WUH6 116 aaKnown RBP12.42□□□□□ -0.42
PHF1-202ENST00000374516 M0QXV9 152 aa12.42□□□□□ -0.42
PHF1-202ENST00000374516 SPINK13Q1W4C9 94 aa12.42□□□□□ -0.42
PHF1-202ENST00000374516 CD28P10747 220 aa12.41□□□□□ -0.42
PHF1-202ENST00000374516 FAM74A4Q5TZK3 123 aa12.41□□□□□ -0.42
PHF1-202ENST00000374516 SVIPQ8NHG7 77 aa12.41□□□□□ -0.42
PHF1-202ENST00000374516 MUSTN1Q8IVN3 82 aa12.4□□□□□ -0.42
PHF1-202ENST00000374516 TMEM61Q8N0U2 210 aa12.4□□□□□ -0.42
PHF1-202ENST00000374516 PEMTQ9UBM1 199 aa12.4□□□□□ -0.42
PHF1-202ENST00000374516 TRAV2A0A0B4J234 112 aa12.4□□□□□ -0.42
PHF1-202ENST00000374516 ZFAND6Q6FIF0 208 aa12.4□□□□□ -0.42
PHF1-202ENST00000374516 SETXQ7Z333 2677 aaKnown RBP12.4□□□□□ -0.42
PHF1-202ENST00000374516 A0A0B4J2C4 111 aa12.39□□□□□ -0.43
PHF1-202ENST00000374516 KNCNA6PVL3 124 aa12.39□□□□□ -0.43
PHF1-202ENST00000374516 H7C2G1 150 aa12.39□□□□□ -0.43
PHF1-202ENST00000374516 M0QY20 66 aa12.39□□□□□ -0.43
PHF1-202ENST00000374516 P0DMU3 169 aa12.39□□□□□ -0.43
PHF1-202ENST00000374516 FAM231AP0DMU4 169 aa12.39□□□□□ -0.43
PHF1-202ENST00000374516 FAM231CP0DMU5 169 aa12.39□□□□□ -0.43
PHF1-202ENST00000374516 DEFB131AP59861 70 aa12.39□□□□□ -0.43
PHF1-202ENST00000374516 NSUN5P1Q3KNT7 163 aa12.38□□□□□ -0.43
PHF1-202ENST00000374516 LINC01006Q8NI28 216 aa12.38□□□□□ -0.43
PHF1-202ENST00000374516 ANAPC13Q9BS18 74 aa12.38□□□□□ -0.43
PHF1-202ENST00000374516 IGHV3-64A0A075B6Q5 118 aa12.38□□□□□ -0.43
PHF1-202ENST00000374516 RHOHQ15669 191 aa12.38□□□□□ -0.43
PHF1-202ENST00000374516 CITED1Q99966 193 aa12.38□□□□□ -0.43
PHF1-202ENST00000374516 CITED2Q99967 270 aaPredicted RBP12.38□□□□□ -0.43
PHF1-202ENST00000374516 RHODO00212 210 aa12.37□□□□□ -0.43
PHF1-202ENST00000374516 ZNF22P17026 224 aaPredicted RBP12.37□□□□□ -0.43
PHF1-202ENST00000374516 DYNLRB2Q8TF09 96 aa12.37□□□□□ -0.43
PHF1-202ENST00000374516 C9orf85Q96MD7 179 aa12.37□□□□□ -0.43
PHF1-202ENST00000374516 MDFICQ9P1T7 246 aa12.37□□□□□ -0.43
PHF1-202ENST00000374516 IGHV3-16A0A0C4DH30 117 aa12.37□□□□□ -0.43
PHF1-202ENST00000374516 ZNF56Q15929 161 aa12.37□□□□□ -0.43
PHF1-202ENST00000374516 RNASE1P07998 156 aaKnown RBP12.36□□□□□ -0.43
PHF1-202ENST00000374516 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.36□□□□□ -0.43
PHF1-202ENST00000374516 C20orf203Q8NBC4 194 aa12.36□□□□□ -0.43
PHF1-202ENST00000374516 ODF3Q96PU9 254 aa12.36□□□□□ -0.43
PHF1-202ENST00000374516 A0A0J9YXV3 536 aa12.35□□□□□ -0.43
PHF1-202ENST00000374516 M0R2P5 195 aa12.35□□□□□ -0.43
PHF1-202ENST00000374516 DEFB114Q30KQ6 69 aa12.35□□□□□ -0.43
PHF1-202ENST00000374516 Q8N1Y9 231 aa12.35□□□□□ -0.43
PHF1-202ENST00000374516 CCL24O00175 119 aa12.34□□□□□ -0.43
PHF1-202ENST00000374516 ATXN8Q156A1 80 aa12.34□□□□□ -0.43
PHF1-202ENST00000374516 NTN5Q8WTR8 489 aaPredicted RBP12.34□□□□□ -0.43
PHF1-202ENST00000374516 Q1RN00 199 aa12.34□□□□□ -0.43
PHF1-202ENST00000374516 LINC01620Q4KN68 170 aa12.34□□□□□ -0.43
PHF1-202ENST00000374516 A0A0J9YXY3 114 aa12.33□□□□□ -0.44
PHF1-202ENST00000374516 HTN1P15515 57 aa12.33□□□□□ -0.44
PHF1-202ENST00000374516 IGLV4-3A0A075B6K6 122 aa12.33□□□□□ -0.44
PHF1-202ENST00000374516 I3L3M4 83 aa12.33□□□□□ -0.44
PHF1-202ENST00000374516 LINC01600Q96MT4 127 aa12.32□□□□□ -0.44
PHF1-202ENST00000374516 TRBV30A0A0K0K1B3 111 aa12.32□□□□□ -0.44
PHF1-202ENST00000374516 NHLRC4P0CG21 123 aaPredicted RBP12.32□□□□□ -0.44
PHF1-202ENST00000374516 HILS1P60008 231 aa12.32□□□□□ -0.44
PHF1-202ENST00000374516 GAGE2BQ13066 116 aa12.32□□□□□ -0.44
PHF1-202ENST00000374516 GAGE2EQ4V326 116 aa12.32□□□□□ -0.44
PHF1-202ENST00000374516 GAGE2DQ9UEU5 116 aa12.32□□□□□ -0.44
PHF1-202ENST00000374516 JMJD1CQ15652 2540 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms