RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 HIST1H2BLQ99880 126 aa12.78□□□□□ -0.36
CDX4-201ENST00000373514 LINC00694P0DN24 101 aa12.78□□□□□ -0.36
CDX4-201ENST00000373514 FABP4P15090 132 aa12.78□□□□□ -0.36
CDX4-201ENST00000373514 PMCHP20382 165 aa12.78□□□□□ -0.36
CDX4-201ENST00000373514 Q8N8P6 123 aa12.78□□□□□ -0.36
CDX4-201ENST00000373514 SMIM2Q9BVW6 85 aa12.78□□□□□ -0.36
CDX4-201ENST00000373514 ST20Q9HBF5 79 aa12.78□□□□□ -0.36
CDX4-201ENST00000373514 NXT2Q9NPJ8 142 aaKnown RBP12.78□□□□□ -0.36
CDX4-201ENST00000373514 AP5S1Q9NUS5 200 aa12.78□□□□□ -0.36
CDX4-201ENST00000373514 IGLV2-18A0A075B6J9 118 aa12.77□□□□□ -0.37
CDX4-201ENST00000373514 TRBV6-5A0A0K0K1A5 114 aa12.77□□□□□ -0.37
CDX4-201ENST00000373514 CCL18P55774 89 aa12.77□□□□□ -0.37
CDX4-201ENST00000373514 NEGR1Q7Z3B1 354 aa12.77□□□□□ -0.37
CDX4-201ENST00000373514 FAM19A2Q8N3H0 131 aa12.77□□□□□ -0.37
CDX4-201ENST00000373514 TMEM18Q96B42 140 aa12.77□□□□□ -0.37
CDX4-201ENST00000373514 NIT2Q9NQR4 276 aa12.77□□□□□ -0.37
CDX4-201ENST00000373514 AMTP48728 403 aa12.76□□□□□ -0.37
CDX4-201ENST00000373514 PMCHL1Q16048 86 aa12.75□□□□□ -0.37
CDX4-201ENST00000373514 LINC01546A6NGU7 62 aa12.74□□□□□ -0.37
CDX4-201ENST00000373514 POLR2KP53803 58 aaKnown RBP12.74□□□□□ -0.37
CDX4-201ENST00000373514 RPL32P62910 135 aaKnown RBP12.74□□□□□ -0.37
CDX4-201ENST00000373514 LYPD5Q6UWN5 251 aa12.74□□□□□ -0.37
CDX4-201ENST00000373514 NEXN-AS1Q8NBZ9 246 aa12.74□□□□□ -0.37
CDX4-201ENST00000373514 TMEM70Q9BUB7 260 aa12.74□□□□□ -0.37
CDX4-201ENST00000373514 IGHV1-24A0A0C4DH33 117 aa12.73□□□□□ -0.37
CDX4-201ENST00000373514 SDHAF1A6NFY7 115 aa12.73□□□□□ -0.37
CDX4-201ENST00000373514 AKR1D1P51857 326 aa12.73□□□□□ -0.37
CDX4-201ENST00000373514 MRPS16Q9Y3D3 137 aaKnown RBP12.73□□□□□ -0.37
CDX4-201ENST00000373514 KMT2AQ03164 3969 aa12.73□□□□□ -0.37
CDX4-201ENST00000373514 ZNRF2Q8NHG8 242 aa12.72□□□□□ -0.37
CDX4-201ENST00000373514 PACRGQ96M98 296 aaPredicted RBP12.72□□□□□ -0.37
CDX4-201ENST00000373514 TCAPO15273 167 aa12.72□□□□□ -0.37
CDX4-201ENST00000373514 OR10D4PQ8NGN7 298 aa12.72□□□□□ -0.37
CDX4-201ENST00000373514 ATP6V0E2Q8NHE4 81 aa12.72□□□□□ -0.37
CDX4-201ENST00000373514 DNAJC30Q96LL9 226 aa12.72□□□□□ -0.37
CDX4-201ENST00000373514 TNFRSF18Q9Y5U5 241 aa12.72□□□□□ -0.37
CDX4-201ENST00000373514 DNAH6Q9C0G6 4158 aa12.72□□□□□ -0.37
CDX4-201ENST00000373514 VCYO14598 125 aa12.71□□□□□ -0.38
CDX4-201ENST00000373514 TRBV10-1A0A0K0K1A3 114 aa12.7□□□□□ -0.38
CDX4-201ENST00000373514 TRBV27A0A0K0K1C4 114 aa12.7□□□□□ -0.38
CDX4-201ENST00000373514 LAGE3Q14657 143 aa12.7□□□□□ -0.38
CDX4-201ENST00000373514 UPK3BQ9BT76 320 aa12.7□□□□□ -0.38
CDX4-201ENST00000373514 A0A096LNJ9 63 aa12.69□□□□□ -0.38
CDX4-201ENST00000373514 M0R2N4 97 aa12.69□□□□□ -0.38
CDX4-201ENST00000373514 UBE2D3P61077 147 aa12.69□□□□□ -0.38
CDX4-201ENST00000373514 UBE2D2P62837 147 aa12.69□□□□□ -0.38
CDX4-201ENST00000373514 RPL36AP83881 106 aaKnown RBP12.69□□□□□ -0.38
CDX4-201ENST00000373514 WFDC10BQ8IUB3 73 aa12.69□□□□□ -0.38
CDX4-201ENST00000373514 RPL36ALQ969Q0 106 aaKnown RBP12.69□□□□□ -0.38
CDX4-201ENST00000373514 IGHV3-38A0A0C4DH36 116 aa12.68□□□□□ -0.38
CDX4-201ENST00000373514 SH2D6Q7Z4S9 175 aa12.68□□□□□ -0.38
CDX4-201ENST00000373514 GTSF1LQ9H1H1 148 aa12.68□□□□□ -0.38
CDX4-201ENST00000373514 TRBV7-3A0A075B6L6 115 aa12.67□□□□□ -0.38
CDX4-201ENST00000373514 K7EMI3 77 aa12.67□□□□□ -0.38
CDX4-201ENST00000373514 HBDP02042 147 aa12.67□□□□□ -0.38
CDX4-201ENST00000373514 FCER1GP30273 86 aa12.67□□□□□ -0.38
CDX4-201ENST00000373514 ORMDL2Q53FV1 153 aa12.67□□□□□ -0.38
CDX4-201ENST00000373514 DEFB104AQ8WTQ1 72 aa12.67□□□□□ -0.38
CDX4-201ENST00000373514 KIR2DL4Q99706 377 aa12.67□□□□□ -0.38
CDX4-201ENST00000373514 I3L3M4 83 aa12.67□□□□□ -0.38
CDX4-201ENST00000373514 Q9H8V8 135 aa12.67□□□□□ -0.38
CDX4-201ENST00000373514 LEPROTL1O95214 131 aa12.66□□□□□ -0.38
CDX4-201ENST00000373514 TSHBP01222 138 aa12.65□□□□□ -0.38
CDX4-201ENST00000373514 TIRAPP58753 221 aa12.65□□□□□ -0.38
CDX4-201ENST00000373514 KRTAP1-5Q9BYS1 174 aa12.65□□□□□ -0.38
CDX4-201ENST00000373514 SIVA1O15304 175 aa12.64□□□□□ -0.39
CDX4-201ENST00000373514 BTF3P20290 206 aaKnown RBP12.64□□□□□ -0.39
CDX4-201ENST00000373514 LINC00173Q6ZV60 143 aa12.64□□□□□ -0.39
CDX4-201ENST00000373514 LELP1Q5T871 98 aa12.63□□□□□ -0.39
CDX4-201ENST00000373514 HSPB8Q9UJY1 196 aa12.63□□□□□ -0.39
CDX4-201ENST00000373514 NBDYA0A0U1RRE5 68 aa12.62□□□□□ -0.39
CDX4-201ENST00000373514 Q6ZR54 194 aa12.62□□□□□ -0.39
CDX4-201ENST00000373514 KRTDAPP60985 99 aa12.62□□□□□ -0.39
CDX4-201ENST00000373514 Q8N3U1 123 aa12.62□□□□□ -0.39
CDX4-201ENST00000373514 C3orf79P0CE67 100 aa12.61□□□□□ -0.39
CDX4-201ENST00000373514 DAZ4Q86SG3 579 aaKnown RBP12.61□□□□□ -0.39
CDX4-201ENST00000373514 DAZ3Q9NR90 486 aaKnown RBP12.61□□□□□ -0.39
CDX4-201ENST00000373514 C2orf66Q6UXQ4 117 aa12.6□□□□□ -0.39
CDX4-201ENST00000373514 NTM-AS1Q6ZSK4 140 aa12.6□□□□□ -0.39
CDX4-201ENST00000373514 TOMM6Q96B49 74 aa12.6□□□□□ -0.39
CDX4-201ENST00000373514 TRAV8-6A0A0B4J262 113 aa12.59□□□□□ -0.39
CDX4-201ENST00000373514 G0S2P27469 103 aa12.59□□□□□ -0.39
CDX4-201ENST00000373514 COTL1Q14019 142 aa12.59□□□□□ -0.39
CDX4-201ENST00000373514 JOSD1Q15040 202 aaPredicted RBP12.58□□□□□ -0.4
CDX4-201ENST00000373514 PYY3Q5JQD4 70 aa12.58□□□□□ -0.4
CDX4-201ENST00000373514 MAP1LC3CQ9BXW4 147 aa12.58□□□□□ -0.4
CDX4-201ENST00000373514 CYSLTR1Q9Y271 337 aa12.58□□□□□ -0.4
CDX4-201ENST00000373514 TRBV6-8A0A0A6YYG3 113 aa12.57□□□□□ -0.4
CDX4-201ENST00000373514 IGHV3-30P01768 117 aa12.57□□□□□ -0.4
CDX4-201ENST00000373514 IGHV3-33P01772 117 aa12.57□□□□□ -0.4
CDX4-201ENST00000373514 DNAH10OSP0CZ25 163 aa12.57□□□□□ -0.4
CDX4-201ENST00000373514 IGHV3-30-3P0DP02 117 aa12.57□□□□□ -0.4
CDX4-201ENST00000373514 IGHV3-30-5P0DP03 117 aa12.57□□□□□ -0.4
CDX4-201ENST00000373514 RPL39P62891 51 aaKnown RBP12.57□□□□□ -0.4
CDX4-201ENST00000373514 C20orf203Q8NBC4 194 aa12.57□□□□□ -0.4
CDX4-201ENST00000373514 IFI27L1Q96BM0 104 aa12.57□□□□□ -0.4
CDX4-201ENST00000373514 SCGB1D1O95968 90 aa12.56□□□□□ -0.4
CDX4-201ENST00000373514 SMIM6P0DI80 62 aa12.56□□□□□ -0.4
CDX4-201ENST00000373514 SCGB3A1Q96QR1 104 aa12.56□□□□□ -0.4
CDX4-201ENST00000373514 CHCHD7Q9BUK0 85 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms