RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 WFDC2Q14508 124 aa12.63□□□□□ -0.39
TRAPPC3-204ENST00000373166 TMEM241Q24JQ0 296 aa12.63□□□□□ -0.39
TRAPPC3-204ENST00000373166 GFRA4Q9GZZ7 299 aa12.63□□□□□ -0.39
TRAPPC3-204ENST00000373166 OXTP01178 125 aa12.62□□□□□ -0.39
TRAPPC3-204ENST00000373166 ANGP03950 147 aaKnown RBP12.62□□□□□ -0.39
TRAPPC3-204ENST00000373166 FOXA3P55318 350 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC3-204ENST00000373166 IQCJQ1A5X6 159 aa12.62□□□□□ -0.39
TRAPPC3-204ENST00000373166 FAM231BA6NCW3 169 aa12.61□□□□□ -0.39
TRAPPC3-204ENST00000373166 SMDT1Q9H4I9 107 aa12.61□□□□□ -0.39
TRAPPC3-204ENST00000373166 NAT8Q9UHE5 227 aa12.61□□□□□ -0.39
TRAPPC3-204ENST00000373166 PLA2G2DQ9UNK4 145 aa12.61□□□□□ -0.39
TRAPPC3-204ENST00000373166 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC3-204ENST00000373166 TRAV26-2A0A0B4J265 109 aa12.6□□□□□ -0.39
TRAPPC3-204ENST00000373166 HIGD1CA8MV81 97 aa12.6□□□□□ -0.39
TRAPPC3-204ENST00000373166 C9JQL5 133 aa12.6□□□□□ -0.39
TRAPPC3-204ENST00000373166 LECT2O14960 151 aa12.6□□□□□ -0.39
TRAPPC3-204ENST00000373166 GAGE6Q13070 117 aa12.6□□□□□ -0.39
TRAPPC3-204ENST00000373166 ADIRFQ15847 76 aa12.6□□□□□ -0.39
TRAPPC3-204ENST00000373166 ATRAIDQ6UW56 229 aa12.6□□□□□ -0.39
TRAPPC3-204ENST00000373166 SCXQ7RTU7 201 aa12.6□□□□□ -0.39
TRAPPC3-204ENST00000373166 GATD1Q8NB37 220 aa12.6□□□□□ -0.39
TRAPPC3-204ENST00000373166 ISOC2Q96AB3 205 aa12.6□□□□□ -0.39
TRAPPC3-204ENST00000373166 FAT3Q8TDW7 4589 aa12.59□□□□□ -0.39
TRAPPC3-204ENST00000373166 A0A1B0GUT8 65 aa12.59□□□□□ -0.39
TRAPPC3-204ENST00000373166 RPL23P62829 140 aaKnown RBP12.59□□□□□ -0.39
TRAPPC3-204ENST00000373166 SRSF3P84103 164 aaKnown RBP12.59□□□□□ -0.39
TRAPPC3-204ENST00000373166 COTL1Q14019 142 aa12.59□□□□□ -0.39
TRAPPC3-204ENST00000373166 Q8N976 141 aa12.59□□□□□ -0.39
TRAPPC3-204ENST00000373166 TMEM243Q9BU79 118 aa12.59□□□□□ -0.39
TRAPPC3-204ENST00000373166 C1orf43Q9BWL3 253 aa12.59□□□□□ -0.39
TRAPPC3-204ENST00000373166 RBX1P62877 108 aa12.58□□□□□ -0.4
TRAPPC3-204ENST00000373166 V9GYV3 84 aa12.58□□□□□ -0.4
TRAPPC3-204ENST00000373166 AMTP48728 403 aa12.57□□□□□ -0.4
TRAPPC3-204ENST00000373166 ENHOQ6UWT2 76 aa12.57□□□□□ -0.4
TRAPPC3-204ENST00000373166 BAALCQ8WXS3 180 aa12.57□□□□□ -0.4
TRAPPC3-204ENST00000373166 CHAC1Q9BUX1 264 aa12.57□□□□□ -0.4
TRAPPC3-204ENST00000373166 UBE2L6O14933 153 aa12.56□□□□□ -0.4
TRAPPC3-204ENST00000373166 MIAQ16674 131 aa12.56□□□□□ -0.4
TRAPPC3-204ENST00000373166 LINC01620Q4KN68 170 aa12.56□□□□□ -0.4
TRAPPC3-204ENST00000373166 RPL39LQ96EH5 51 aaKnown RBP12.56□□□□□ -0.4
TRAPPC3-204ENST00000373166 KRTAP10-4P60372 401 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC3-204ENST00000373166 RAB14P61106 215 aa12.55□□□□□ -0.4
TRAPPC3-204ENST00000373166 NAT8BQ9UHF3 227 aa12.55□□□□□ -0.4
TRAPPC3-204ENST00000373166 RIGQ13278 110 aa12.54□□□□□ -0.4
TRAPPC3-204ENST00000373166 CLPSL2Q6UWE3 100 aa12.54□□□□□ -0.4
TRAPPC3-204ENST00000373166 TMEM191AQ9H0A3 160 aa12.54□□□□□ -0.4
TRAPPC3-204ENST00000373166 LINC00269Q8N2A0 174 aa12.53□□□□□ -0.4
TRAPPC3-204ENST00000373166 NUP35Q8NFH5 326 aa12.53□□□□□ -0.4
TRAPPC3-204ENST00000373166 PRR34Q9NV39 138 aa12.53□□□□□ -0.4
TRAPPC3-204ENST00000373166 NCR2O95944 276 aa12.52□□□□□ -0.41
TRAPPC3-204ENST00000373166 CIRBP-AS1Q8TBR5 109 aa12.52□□□□□ -0.41
TRAPPC3-204ENST00000373166 SDHAF1A6NFY7 115 aa12.51□□□□□ -0.41
TRAPPC3-204ENST00000373166 HLA-DQA1P01909 254 aa12.51□□□□□ -0.41
TRAPPC3-204ENST00000373166 MRAP2Q96G30 205 aa12.51□□□□□ -0.41
TRAPPC3-204ENST00000373166 TRBV6-5A0A0K0K1A5 114 aa12.5□□□□□ -0.41
TRAPPC3-204ENST00000373166 A0A1B0GUV1 79 aa12.5□□□□□ -0.41
TRAPPC3-204ENST00000373166 APCSP02743 223 aa12.5□□□□□ -0.41
TRAPPC3-204ENST00000373166 REG3AQ06141 175 aa12.5□□□□□ -0.41
TRAPPC3-204ENST00000373166 C14orf177Q52M58 125 aa12.5□□□□□ -0.41
TRAPPC3-204ENST00000373166 AMN1Q8IY45 258 aa12.5□□□□□ -0.41
TRAPPC3-204ENST00000373166 C20orf203Q8NBC4 194 aa12.5□□□□□ -0.41
TRAPPC3-204ENST00000373166 ST20Q9HBF5 79 aa12.5□□□□□ -0.41
TRAPPC3-204ENST00000373166 SMIM27A0A1W2PRY6 76 aa12.49□□□□□ -0.41
TRAPPC3-204ENST00000373166 RAB4AP20338 218 aa12.49□□□□□ -0.41
TRAPPC3-204ENST00000373166 RNF185Q96GF1 192 aa12.49□□□□□ -0.41
TRAPPC3-204ENST00000373166 IGLV4-60A0A075B6I1 120 aa12.48□□□□□ -0.41
TRAPPC3-204ENST00000373166 I3L3M4 83 aa12.48□□□□□ -0.41
TRAPPC3-204ENST00000373166 PMCHP20382 165 aa12.48□□□□□ -0.41
TRAPPC3-204ENST00000373166 AMMECR1LQ6DCA0 310 aa12.48□□□□□ -0.41
TRAPPC3-204ENST00000373166 A0A1B0GW15 77 aa12.47□□□□□ -0.41
TRAPPC3-204ENST00000373166 GAS8-AS1O95177 125 aa12.46□□□□□ -0.41
TRAPPC3-204ENST00000373166 IGLV10-54A0A075B6I4 117 aa12.45□□□□□ -0.42
TRAPPC3-204ENST00000373166 TRAV8-4A0A0B4J246 113 aa12.45□□□□□ -0.42
TRAPPC3-204ENST00000373166 USP17L23D6RBM5 183 aa12.45□□□□□ -0.42
TRAPPC3-204ENST00000373166 H7C423 109 aa12.45□□□□□ -0.42
TRAPPC3-204ENST00000373166 PPP1R17O96001 155 aa12.45□□□□□ -0.42
TRAPPC3-204ENST00000373166 RPS10P46783 165 aaKnown RBP12.45□□□□□ -0.42
TRAPPC3-204ENST00000373166 CAMPP49913 170 aa12.45□□□□□ -0.42
TRAPPC3-204ENST00000373166 PKHD1L1Q86WI1 4243 aa12.44□□□□□ -0.42
TRAPPC3-204ENST00000373166 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC3-204ENST00000373166 IGKV2-29A2NJV5 120 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC3-204ENST00000373166 S100A8P05109 93 aa12.44□□□□□ -0.42
TRAPPC3-204ENST00000373166 RNASEKQ6P5S7 137 aaKnown RBP12.44□□□□□ -0.42
TRAPPC3-204ENST00000373166 TMEM242Q9NWH2 141 aa12.44□□□□□ -0.42
TRAPPC3-204ENST00000373166 SMKR1H3BMG3 65 aa12.43□□□□□ -0.42
TRAPPC3-204ENST00000373166 PPP1R2P9O14990 202 aa12.43□□□□□ -0.42
TRAPPC3-204ENST00000373166 TSHBP01222 138 aa12.43□□□□□ -0.42
TRAPPC3-204ENST00000373166 RPL37AP61513 92 aaKnown RBP12.43□□□□□ -0.42
TRAPPC3-204ENST00000373166 PNRC1Q12796 327 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC3-204ENST00000373166 CLLU1Q5K131 121 aa12.43□□□□□ -0.42
TRAPPC3-204ENST00000373166 KRTAP26-1Q6PEX3 210 aa12.43□□□□□ -0.42
TRAPPC3-204ENST00000373166 TRBV27A0A0K0K1C4 114 aa12.42□□□□□ -0.42
TRAPPC3-204ENST00000373166 FGF6P10767 208 aa12.42□□□□□ -0.42
TRAPPC3-204ENST00000373166 HBBP68871 147 aa12.42□□□□□ -0.42
TRAPPC3-204ENST00000373166 FAM104BQ5XKR9 115 aa12.42□□□□□ -0.42
TRAPPC3-204ENST00000373166 MRPL54Q6P161 138 aaKnown RBP12.42□□□□□ -0.42
TRAPPC3-204ENST00000373166 ZNF25P17030 456 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC3-204ENST00000373166 POLR2KP53803 58 aaKnown RBP12.41□□□□□ -0.42
TRAPPC3-204ENST00000373166 BTF3L4Q96K17 158 aa12.41□□□□□ -0.42
TRAPPC3-204ENST00000373166 IGKV3OR2-268A0A0C4DH90 116 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms