RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 TRGV1A0A0A0MS02 117 aa9.66□□□□□ -0.86
CSTF2-201ENST00000372972 CCL25O15444 150 aa9.66□□□□□ -0.86
CSTF2-201ENST00000372972 PF4P02776 101 aa9.66□□□□□ -0.86
CSTF2-201ENST00000372972 HERVK_113P61574 105 aa9.66□□□□□ -0.86
CSTF2-201ENST00000372972 OR4C5Q8NGB2 326 aa9.66□□□□□ -0.86
CSTF2-201ENST00000372972 WFDC10AQ9H1F0 79 aa9.66□□□□□ -0.86
CSTF2-201ENST00000372972 PYGO1Q9Y3Y4 419 aa9.66□□□□□ -0.86
CSTF2-201ENST00000372972 CYSRT1A8MQ03 144 aa9.65□□□□□ -0.86
CSTF2-201ENST00000372972 TAL2Q16559 108 aa9.65□□□□□ -0.86
CSTF2-201ENST00000372972 ZNRF2Q8NHG8 242 aa9.65□□□□□ -0.86
CSTF2-201ENST00000372972 TM2D2Q9BX73 214 aa9.65□□□□□ -0.86
CSTF2-201ENST00000372972 C1QTNF4Q9BXJ3 329 aa9.65□□□□□ -0.86
CSTF2-201ENST00000372972 BAHCC1Q9P281 2608 aa9.65□□□□□ -0.86
CSTF2-201ENST00000372972 IGLV4-3A0A075B6K6 122 aa9.64□□□□□ -0.87
CSTF2-201ENST00000372972 RPL35AP18077 110 aaKnown RBP9.64□□□□□ -0.87
CSTF2-201ENST00000372972 NFE4Q86UQ8 179 aa9.64□□□□□ -0.87
CSTF2-201ENST00000372972 CEND1Q8N111 149 aa9.64□□□□□ -0.87
CSTF2-201ENST00000372972 VCX2Q9H322 139 aa9.64□□□□□ -0.87
CSTF2-201ENST00000372972 NACAE9PAV3 2078 aa9.64□□□□□ -0.87
CSTF2-201ENST00000372972 FXYD2P54710 66 aa9.64□□□□□ -0.87
CSTF2-201ENST00000372972 TMEM170BQ5T4T1 132 aa9.64□□□□□ -0.87
CSTF2-201ENST00000372972 LINC00482Q8N8I6 264 aa9.64□□□□□ -0.87
CSTF2-201ENST00000372972 C9orf118A6NHY6 69 aa9.63□□□□□ -0.87
CSTF2-201ENST00000372972 CRYBA4P53673 196 aa9.63□□□□□ -0.87
CSTF2-201ENST00000372972 AMMECR1LQ6DCA0 310 aa9.63□□□□□ -0.87
CSTF2-201ENST00000372972 ZNF815PA8K554 130 aa9.63□□□□□ -0.87
CSTF2-201ENST00000372972 SMIM13P0DJ93 91 aa9.63□□□□□ -0.87
CSTF2-201ENST00000372972 DAZ2Q13117 558 aaKnown RBP9.63□□□□□ -0.87
CSTF2-201ENST00000372972 Q6ZTI0 123 aa9.63□□□□□ -0.87
CSTF2-201ENST00000372972 C16orf74Q96GX8 76 aa9.63□□□□□ -0.87
CSTF2-201ENST00000372972 HIST1H4GQ99525 98 aa9.63□□□□□ -0.87
CSTF2-201ENST00000372972 CHCHD7Q9BUK0 85 aa9.63□□□□□ -0.87
CSTF2-201ENST00000372972 K7EP13 123 aa9.62□□□□□ -0.87
CSTF2-201ENST00000372972 COTL1Q14019 142 aa9.62□□□□□ -0.87
CSTF2-201ENST00000372972 CSNK1G2-AS1Q8NCQ2 148 aa9.62□□□□□ -0.87
CSTF2-201ENST00000372972 ZNF479Q96JC4 524 aa9.62□□□□□ -0.87
CSTF2-201ENST00000372972 NOP10Q9NPE3 64 aaKnown RBP9.62□□□□□ -0.87
CSTF2-201ENST00000372972 TRAV4A0A0B4J268 109 aa9.61□□□□□ -0.87
CSTF2-201ENST00000372972 PHLDA1Q8WV24 401 aaPredicted RBP9.61□□□□□ -0.87
CSTF2-201ENST00000372972 AMELXQ99217 191 aa9.61□□□□□ -0.87
CSTF2-201ENST00000372972 SPANXA1Q9NS26 97 aa9.61□□□□□ -0.87
CSTF2-201ENST00000372972 NIPBLQ6KC79 2804 aaeCLIP9.61□□□□□ -0.87
CSTF2-201ENST00000372972 FAM104AQ969W3 186 aa9.61□□□□□ -0.87
CSTF2-201ENST00000372972 RAB37Q96AX2 223 aa9.61□□□□□ -0.87
CSTF2-201ENST00000372972 CITED1Q99966 193 aa9.61□□□□□ -0.87
CSTF2-201ENST00000372972 TRBV7-3A0A075B6L6 115 aa9.6□□□□□ -0.87
CSTF2-201ENST00000372972 IGHV3-38A0A0C4DH36 116 aa9.6□□□□□ -0.87
CSTF2-201ENST00000372972 TRBV10-1A0A0K0K1A3 114 aa9.6□□□□□ -0.87
CSTF2-201ENST00000372972 UBE2D4Q9Y2X8 147 aa9.6□□□□□ -0.87
CSTF2-201ENST00000372972 JMJD1CQ15652 2540 aa9.59□□□□□ -0.87
CSTF2-201ENST00000372972 A0A0J9YXV3 536 aa9.59□□□□□ -0.87
CSTF2-201ENST00000372972 PLAC8L1A1L4L8 177 aa9.59□□□□□ -0.87
CSTF2-201ENST00000372972 H3BUT2 72 aa9.59□□□□□ -0.87
CSTF2-201ENST00000372972 RRN3P1Q2M238 152 aa9.59□□□□□ -0.87
CSTF2-201ENST00000372972 CEMP1Q6PRD7 247 aaPredicted RBP9.59□□□□□ -0.87
CSTF2-201ENST00000372972 SCGB1D4Q6XE38 83 aa9.59□□□□□ -0.87
CSTF2-201ENST00000372972 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.59□□□□□ -0.87
CSTF2-201ENST00000372972 TMEM223A0PJW6 202 aa9.59□□□□□ -0.87
CSTF2-201ENST00000372972 IGKV2-29A2NJV5 120 aaPredicted RBP9.59□□□□□ -0.87
CSTF2-201ENST00000372972 K7EQD1 137 aa9.59□□□□□ -0.87
CSTF2-201ENST00000372972 RPL36AP83881 106 aaKnown RBP9.59□□□□□ -0.87
CSTF2-201ENST00000372972 SPATA3Q8NHX4 192 aa9.59□□□□□ -0.87
CSTF2-201ENST00000372972 RPL36ALQ969Q0 106 aaKnown RBP9.59□□□□□ -0.87
CSTF2-201ENST00000372972 TENM1Q9UKZ4 2725 aa9.58□□□□□ -0.88
CSTF2-201ENST00000372972 ZNF22P17026 224 aaPredicted RBP9.58□□□□□ -0.88
CSTF2-201ENST00000372972 INSL3P51460 131 aa9.58□□□□□ -0.88
CSTF2-201ENST00000372972 PLEKHB2Q96CS7 222 aa9.58□□□□□ -0.88
CSTF2-201ENST00000372972 OVOL2Q9BRP0 275 aa9.58□□□□□ -0.88
CSTF2-201ENST00000372972 NHP2Q9NX24 153 aaKnown RBP9.58□□□□□ -0.88
CSTF2-201ENST00000372972 J3QQQ9 107 aa9.57□□□□□ -0.88
CSTF2-201ENST00000372972 CIDEAO60543 219 aa9.57□□□□□ -0.88
CSTF2-201ENST00000372972 MRPS36P82909 103 aaKnown RBP9.57□□□□□ -0.88
CSTF2-201ENST00000372972 LEPROTO15243 131 aa9.57□□□□□ -0.88
CSTF2-201ENST00000372972 TSPEAR-AS2P59090 65 aa9.57□□□□□ -0.88
CSTF2-201ENST00000372972 SLC25A29Q8N8R3 303 aa9.57□□□□□ -0.88
CSTF2-201ENST00000372972 TRGV2A0A075B6R0 118 aa9.56□□□□□ -0.88
CSTF2-201ENST00000372972 GAGE12BA1L429 117 aa9.56□□□□□ -0.88
CSTF2-201ENST00000372972 GAGE10A6NGK3 116 aa9.56□□□□□ -0.88
CSTF2-201ENST00000372972 GAGE7O76087 117 aa9.56□□□□□ -0.88
CSTF2-201ENST00000372972 GAGE12FP0CL80 117 aa9.56□□□□□ -0.88
CSTF2-201ENST00000372972 GAGE12GP0CL81 117 aa9.56□□□□□ -0.88
CSTF2-201ENST00000372972 GAGE12IP0CL82 117 aa9.56□□□□□ -0.88
CSTF2-201ENST00000372972 LGALS3P17931 250 aaKnown RBP9.56□□□□□ -0.88
CSTF2-201ENST00000372972 C9orf66Q5T8R8 295 aa9.56□□□□□ -0.88
CSTF2-201ENST00000372972 DAZ4Q86SG3 579 aaKnown RBP9.56□□□□□ -0.88
CSTF2-201ENST00000372972 NAA38Q9BRA0 125 aaKnown RBP9.56□□□□□ -0.88
CSTF2-201ENST00000372972 DAZ3Q9NR90 486 aaKnown RBP9.56□□□□□ -0.88
CSTF2-201ENST00000372972 A0A0J9YY99 117 aa9.55□□□□□ -0.88
CSTF2-201ENST00000372972 A0A1W2PPM0 123 aa9.55□□□□□ -0.88
CSTF2-201ENST00000372972 K7ERJ3 54 aa9.55□□□□□ -0.88
CSTF2-201ENST00000372972 SRSF9Q13242 221 aaKnown RBP eCLIP9.55□□□□□ -0.88
CSTF2-201ENST00000372972 C12orf74Q32Q52 190 aa9.55□□□□□ -0.88
CSTF2-201ENST00000372972 GTF2H5Q6ZYL4 71 aa9.55□□□□□ -0.88
CSTF2-201ENST00000372972 TIMM21Q9BVV7 248 aa9.55□□□□□ -0.88
CSTF2-201ENST00000372972 TEP1Q99973 2627 aaKnown RBP9.55□□□□□ -0.88
CSTF2-201ENST00000372972 ATRQ13535 2644 aa9.55□□□□□ -0.88
CSTF2-201ENST00000372972 RNASE13Q5GAN3 156 aaKnown RBP9.55□□□□□ -0.88
CSTF2-201ENST00000372972 SAMD5Q5TGI4 173 aa9.55□□□□□ -0.88
CSTF2-201ENST00000372972 TINCRA0A1B0GVN0 87 aa9.54□□□□□ -0.88
CSTF2-201ENST00000372972 UBE2D3P61077 147 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms