RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 MSMPQ1L6U9 139 aa7.94□□□□□ -1.14
TRERF1-203ENST00000372917 LINC01560Q8TB33 94 aa7.94□□□□□ -1.14
TRERF1-203ENST00000372917 TECTAO75443 2155 aa7.94□□□□□ -1.14
TRERF1-203ENST00000372917 PDE6HQ13956 83 aa7.94□□□□□ -1.14
TRERF1-203ENST00000372917 BPESC1Q9GZL8 116 aa7.94□□□□□ -1.14
TRERF1-203ENST00000372917 TLN1Q9Y490 2541 aaKnown RBP7.93□□□□□ -1.14
TRERF1-203ENST00000372917 A0A0J9YXV3 536 aa7.93□□□□□ -1.14
TRERF1-203ENST00000372917 SDHAF1A6NFY7 115 aa7.93□□□□□ -1.14
TRERF1-203ENST00000372917 EPM2AB3EWF7 344 aa7.93□□□□□ -1.14
TRERF1-203ENST00000372917 RPL28P46779 137 aaKnown RBP7.93□□□□□ -1.14
TRERF1-203ENST00000372917 ZNF876PQ49A33 203 aa7.93□□□□□ -1.14
TRERF1-203ENST00000372917 PTPRQQ9UMZ3 2332 aa7.93□□□□□ -1.14
TRERF1-203ENST00000372917 PAX4O43316 350 aa7.93□□□□□ -1.14
TRERF1-203ENST00000372917 RMI2Q96E14 147 aa7.93□□□□□ -1.14
TRERF1-203ENST00000372917 TMEM141Q96I45 108 aa7.93□□□□□ -1.14
TRERF1-203ENST00000372917 NDUFA12Q9UI09 145 aa7.93□□□□□ -1.14
TRERF1-203ENST00000372917 A0A1W2PNU3 283 aaPredicted RBP7.92□□□□□ -1.14
TRERF1-203ENST00000372917 IGIPA6NJ69 53 aa7.92□□□□□ -1.14
TRERF1-203ENST00000372917 LY6HO94772 140 aa7.92□□□□□ -1.14
TRERF1-203ENST00000372917 PRAC2D3DTV9 90 aa7.92□□□□□ -1.14
TRERF1-203ENST00000372917 IGHV3-30-3P0DP02 117 aa7.92□□□□□ -1.14
TRERF1-203ENST00000372917 FREM2Q5SZK8 3169 aa7.92□□□□□ -1.14
TRERF1-203ENST00000372917 WT1P19544 449 aaPredicted RBP7.92□□□□□ -1.14
TRERF1-203ENST00000372917 MIAQ16674 131 aa7.92□□□□□ -1.14
TRERF1-203ENST00000372917 PHLDA3Q9Y5J5 127 aa7.92□□□□□ -1.14
TRERF1-203ENST00000372917 C2CD3Q4AC94 2353 aa7.92□□□□□ -1.14
TRERF1-203ENST00000372917 IGHV1-69DA0A0B4J2H0 117 aa7.91□□□□□ -1.14
TRERF1-203ENST00000372917 IGHV7-4-1A0A0J9YVY3 117 aa7.91□□□□□ -1.14
TRERF1-203ENST00000372917 SAA4P35542 130 aa7.91□□□□□ -1.14
TRERF1-203ENST00000372917 CSPG4Q6UVK1 2322 aa7.91□□□□□ -1.14
TRERF1-203ENST00000372917 BUB1B-PAK6H3BSN5 160 aa7.91□□□□□ -1.14
TRERF1-203ENST00000372917 IGHV1-8P0DP01 117 aa7.91□□□□□ -1.14
TRERF1-203ENST00000372917 MRPS36P82909 103 aaKnown RBP7.91□□□□□ -1.14
TRERF1-203ENST00000372917 APRG1Q8IVJ8 170 aa7.91□□□□□ -1.14
TRERF1-203ENST00000372917 LINC00574Q9H8X3 128 aa7.91□□□□□ -1.14
TRERF1-203ENST00000372917 ENHOQ6UWT2 76 aa7.9□□□□□ -1.14
TRERF1-203ENST00000372917 STHQ8IWL8 128 aa7.9□□□□□ -1.14
TRERF1-203ENST00000372917 A8MZ25 164 aa7.9□□□□□ -1.15
TRERF1-203ENST00000372917 HTN1P15515 57 aa7.9□□□□□ -1.15
TRERF1-203ENST00000372917 COX8CQ7Z4L0 72 aa7.89□□□□□ -1.15
TRERF1-203ENST00000372917 SORL1Q92673 2214 aa7.89□□□□□ -1.15
TRERF1-203ENST00000372917 IGHV1-3A0A0C4DH29 117 aa7.89□□□□□ -1.15
TRERF1-203ENST00000372917 DAD1P61803 113 aa7.89□□□□□ -1.15
TRERF1-203ENST00000372917 PVRIGQ6DKI7 326 aa7.89□□□□□ -1.15
TRERF1-203ENST00000372917 VSIG2Q96IQ7 327 aa7.89□□□□□ -1.15
TRERF1-203ENST00000372917 DPM3Q9P2X0 92 aa7.89□□□□□ -1.15
TRERF1-203ENST00000372917 ATRXP46100 2492 aa7.89□□□□□ -1.15
TRERF1-203ENST00000372917 IGLV3-9A0A075B6K5 115 aa7.89□□□□□ -1.15
TRERF1-203ENST00000372917 LITAFQ99732 161 aa7.89□□□□□ -1.15
TRERF1-203ENST00000372917 OTOGLQ3ZCN5 2332 aa7.88□□□□□ -1.15
TRERF1-203ENST00000372917 TIMM17AQ99595 171 aa7.88□□□□□ -1.15
TRERF1-203ENST00000372917 IGLV2-23P01705 113 aa7.88□□□□□ -1.15
TRERF1-203ENST00000372917 A0A0J9YX75 114 aa7.87□□□□□ -1.15
TRERF1-203ENST00000372917 Q8N2B8 174 aa7.87□□□□□ -1.15
TRERF1-203ENST00000372917 CEP295Q9C0D2 2601 aa7.87□□□□□ -1.15
TRERF1-203ENST00000372917 A0A087WZ39 114 aa7.87□□□□□ -1.15
TRERF1-203ENST00000372917 FAM218AQ96MZ4 157 aa7.87□□□□□ -1.15
TRERF1-203ENST00000372917 TRBV27A0A0K0K1C4 114 aa7.86□□□□□ -1.15
TRERF1-203ENST00000372917 I3L2K1 104 aa7.86□□□□□ -1.15
TRERF1-203ENST00000372917 SOCS3O14543 225 aa7.86□□□□□ -1.15
TRERF1-203ENST00000372917 PPP1R17O96001 155 aa7.86□□□□□ -1.15
TRERF1-203ENST00000372917 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.86□□□□□ -1.15
TRERF1-203ENST00000372917 CLEC19AQ6UXS0 136 aa7.86□□□□□ -1.15
TRERF1-203ENST00000372917 VCYO14598 125 aa7.86□□□□□ -1.15
TRERF1-203ENST00000372917 C9orf129Q5T035 196 aaKnown RBP7.86□□□□□ -1.15
TRERF1-203ENST00000372917 MUC6Q6W4X9 2439 aa7.86□□□□□ -1.15
TRERF1-203ENST00000372917 RNF223E7ERA6 249 aa7.85□□□□□ -1.15
TRERF1-203ENST00000372917 NCR3O14931 201 aa7.85□□□□□ -1.15
TRERF1-203ENST00000372917 FAM229BQ4G0N7 80 aa7.85□□□□□ -1.15
TRERF1-203ENST00000372917 PSMG3-AS1Q96PY0 264 aa7.85□□□□□ -1.15
TRERF1-203ENST00000372917 C22orf24Q9Y442 160 aa7.85□□□□□ -1.15
TRERF1-203ENST00000372917 REV3LO60673 3130 aa7.85□□□□□ -1.15
TRERF1-203ENST00000372917 PTPN13Q12923 2485 aa7.85□□□□□ -1.15
TRERF1-203ENST00000372917 FAM222AQ5U5X8 452 aa7.85□□□□□ -1.15
TRERF1-203ENST00000372917 IGKV3-20P01619 116 aa7.84□□□□□ -1.15
TRERF1-203ENST00000372917 PRB1P04280 392 aa7.84□□□□□ -1.15
TRERF1-203ENST00000372917 TRAV21A0A0B4J279 112 aa7.84□□□□□ -1.15
TRERF1-203ENST00000372917 RNASE13Q5GAN3 156 aaKnown RBP7.84□□□□□ -1.15
TRERF1-203ENST00000372917 FAM74A4Q5TZK3 123 aa7.84□□□□□ -1.15
TRERF1-203ENST00000372917 FAM215AQ9Y5M1 114 aa7.84□□□□□ -1.15
TRERF1-203ENST00000372917 C22orf34Q6ZV56 151 aa7.84□□□□□ -1.16
TRERF1-203ENST00000372917 DSPP15924 2871 aaKnown RBP7.83□□□□□ -1.16
TRERF1-203ENST00000372917 RAI1Q7Z5J4 1906 aaPredicted RBP7.83□□□□□ -1.16
TRERF1-203ENST00000372917 TRAV7A0A075B6U4 112 aa7.83□□□□□ -1.16
TRERF1-203ENST00000372917 BLCAPP62952 87 aa7.83□□□□□ -1.16
TRERF1-203ENST00000372917 GPHB5Q86YW7 130 aa7.83□□□□□ -1.16
TRERF1-203ENST00000372917 FAM208BQ5VWN6 2430 aa7.83□□□□□ -1.16
TRERF1-203ENST00000372917 A0A087WWL8 130 aa7.83□□□□□ -1.16
TRERF1-203ENST00000372917 PLAC8L1A1L4L8 177 aa7.83□□□□□ -1.16
TRERF1-203ENST00000372917 IGHV4-4A0A075B6R2 117 aa7.83□□□□□ -1.16
TRERF1-203ENST00000372917 K7EIM0 57 aa7.83□□□□□ -1.16
TRERF1-203ENST00000372917 PRR15Q8IV56 129 aa7.83□□□□□ -1.16
TRERF1-203ENST00000372917 WNK1Q9H4A3 2382 aa7.82□□□□□ -1.16
TRERF1-203ENST00000372917 IGF2RP11717 2491 aa7.82□□□□□ -1.16
TRERF1-203ENST00000372917 BEAN1Q3B7T3 259 aa7.82□□□□□ -1.16
TRERF1-203ENST00000372917 SEM1Q6ZVN7 128 aa7.82□□□□□ -1.16
TRERF1-203ENST00000372917 CACNA1AO00555 2505 aa7.82□□□□□ -1.16
TRERF1-203ENST00000372917 PRSS33Q8NF86 280 aa7.82□□□□□ -1.16
TRERF1-203ENST00000372917 SMAD5-AS1Q9Y6J3 95 aa7.82□□□□□ -1.16
TRERF1-203ENST00000372917 ACACBO00763 2458 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms