RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 RNF183Q96D59 192 aa11.49□□□□□ -0.57
C9orf78-201ENST00000372447 OVOL2Q9BRP0 275 aa11.49□□□□□ -0.57
C9orf78-201ENST00000372447 MRPL16Q9NX20 251 aaKnown RBP11.49□□□□□ -0.57
C9orf78-201ENST00000372447 I3L3M4 83 aa11.48□□□□□ -0.57
C9orf78-201ENST00000372447 RHOHQ15669 191 aa11.48□□□□□ -0.57
C9orf78-201ENST00000372447 C2orf91Q6ZV80 131 aa11.48□□□□□ -0.57
C9orf78-201ENST00000372447 SPATA25Q9BR10 227 aa11.48□□□□□ -0.57
C9orf78-201ENST00000372447 CHTOPQ9Y3Y2 248 aaKnown RBP11.48□□□□□ -0.57
C9orf78-201ENST00000372447 IGIPA6NJ69 53 aa11.47□□□□□ -0.57
C9orf78-201ENST00000372447 RHODO00212 210 aa11.47□□□□□ -0.57
C9orf78-201ENST00000372447 DLEU1O43261 78 aa11.47□□□□□ -0.57
C9orf78-201ENST00000372447 MPV17L2Q567V2 206 aa11.47□□□□□ -0.57
C9orf78-201ENST00000372447 COL7A1Q02388 2944 aa11.47□□□□□ -0.57
C9orf78-201ENST00000372447 TSHBP01222 138 aa11.46□□□□□ -0.57
C9orf78-201ENST00000372447 NHLRC4P0CG21 123 aaPredicted RBP11.46□□□□□ -0.57
C9orf78-201ENST00000372447 RPL39P62891 51 aaKnown RBP11.46□□□□□ -0.57
C9orf78-201ENST00000372447 IL17DQ8TAD2 202 aa11.46□□□□□ -0.57
C9orf78-201ENST00000372447 RNASE8Q8TDE3 154 aaKnown RBP11.46□□□□□ -0.57
C9orf78-201ENST00000372447 TMEM141Q96I45 108 aa11.46□□□□□ -0.57
C9orf78-201ENST00000372447 TENM3Q9P273 2699 aa11.46□□□□□ -0.57
C9orf78-201ENST00000372447 IGKV2D-26A0A0A0MRZ7 120 aa11.46□□□□□ -0.58
C9orf78-201ENST00000372447 PRSS29PA6NIE9 313 aa11.46□□□□□ -0.58
C9orf78-201ENST00000372447 RS1O15537 224 aa11.46□□□□□ -0.58
C9orf78-201ENST00000372447 P0DMU3 169 aa11.46□□□□□ -0.58
C9orf78-201ENST00000372447 FAM231AP0DMU4 169 aa11.46□□□□□ -0.58
C9orf78-201ENST00000372447 FAM231CP0DMU5 169 aa11.46□□□□□ -0.58
C9orf78-201ENST00000372447 PCP2Q8IVA1 136 aa11.46□□□□□ -0.58
C9orf78-201ENST00000372447 TIMM17AQ99595 171 aa11.46□□□□□ -0.58
C9orf78-201ENST00000372447 Q6ZSN1 163 aa11.45□□□□□ -0.58
C9orf78-201ENST00000372447 TMEM263Q8WUH6 116 aaKnown RBP11.45□□□□□ -0.58
C9orf78-201ENST00000372447 TNFRSF18Q9Y5U5 241 aa11.45□□□□□ -0.58
C9orf78-201ENST00000372447 SIVA1O15304 175 aa11.44□□□□□ -0.58
C9orf78-201ENST00000372447 IGHV3-53P01767 116 aa11.44□□□□□ -0.58
C9orf78-201ENST00000372447 BVES-AS1Q5T3Y7 98 aa11.44□□□□□ -0.58
C9orf78-201ENST00000372447 OR11H2Q8NH07 326 aa11.44□□□□□ -0.58
C9orf78-201ENST00000372447 TGP01266 2768 aa11.43□□□□□ -0.58
C9orf78-201ENST00000372447 TRGV1A0A0A0MS02 117 aa11.42□□□□□ -0.58
C9orf78-201ENST00000372447 PMVKQ15126 192 aa11.42□□□□□ -0.58
C9orf78-201ENST00000372447 C20orf203Q8NBC4 194 aa11.42□□□□□ -0.58
C9orf78-201ENST00000372447 X6R8D5 127 aa11.42□□□□□ -0.58
C9orf78-201ENST00000372447 DNAJC30Q96LL9 226 aa11.41□□□□□ -0.58
C9orf78-201ENST00000372447 CST9LQ9H4G1 147 aa11.41□□□□□ -0.58
C9orf78-201ENST00000372447 OR4C5Q8NGB2 326 aa11.41□□□□□ -0.58
C9orf78-201ENST00000372447 Q9UF83 564 aa11.41□□□□□ -0.58
C9orf78-201ENST00000372447 TMEM97Q5BJF2 176 aa11.4□□□□□ -0.58
C9orf78-201ENST00000372447 C16orf74Q96GX8 76 aa11.4□□□□□ -0.58
C9orf78-201ENST00000372447 DAZ2Q13117 558 aaKnown RBP11.39□□□□□ -0.59
C9orf78-201ENST00000372447 TTTY13Q9BZ97 58 aa11.39□□□□□ -0.59
C9orf78-201ENST00000372447 NACAE9PAV3 2078 aa11.39□□□□□ -0.59
C9orf78-201ENST00000372447 IGLV4-69A0A075B6H9 119 aa11.39□□□□□ -0.59
C9orf78-201ENST00000372447 PAPPA-AS1Q5QFB9 102 aa11.39□□□□□ -0.59
C9orf78-201ENST00000372447 Q6ZTI0 123 aa11.39□□□□□ -0.59
C9orf78-201ENST00000372447 NOP10Q9NPE3 64 aaKnown RBP11.39□□□□□ -0.59
C9orf78-201ENST00000372447 STAB2Q8WWQ8 2551 aa11.38□□□□□ -0.59
C9orf78-201ENST00000372447 PLAC8L1A1L4L8 177 aa11.38□□□□□ -0.59
C9orf78-201ENST00000372447 Q8NAQ8 132 aa11.38□□□□□ -0.59
C9orf78-201ENST00000372447 TRAV4A0A0B4J268 109 aa11.37□□□□□ -0.59
C9orf78-201ENST00000372447 DEFB4AO15263 64 aa11.37□□□□□ -0.59
C9orf78-201ENST00000372447 MIFP14174 115 aa11.37□□□□□ -0.59
C9orf78-201ENST00000372447 ZNF25P17030 456 aaPredicted RBP11.37□□□□□ -0.59
C9orf78-201ENST00000372447 HSD52Q0P140 79 aa11.37□□□□□ -0.59
C9orf78-201ENST00000372447 ZNF479Q96JC4 524 aa11.37□□□□□ -0.59
C9orf78-201ENST00000372447 HIGD1BQ9P298 99 aa11.37□□□□□ -0.59
C9orf78-201ENST00000372447 TRAV8-6A0A0B4J262 113 aa11.36□□□□□ -0.59
C9orf78-201ENST00000372447 IGHV4-28A0A0C4DH34 117 aa11.36□□□□□ -0.59
C9orf78-201ENST00000372447 SMIM9A6NGZ8 99 aa11.36□□□□□ -0.59
C9orf78-201ENST00000372447 C11orf86A6NJI1 115 aa11.36□□□□□ -0.59
C9orf78-201ENST00000372447 RRN3P1Q2M238 152 aa11.36□□□□□ -0.59
C9orf78-201ENST00000372447 OPRPNQ99935 248 aaPredicted RBP11.36□□□□□ -0.59
C9orf78-201ENST00000372447 TRBV25-1A0A075B6N4 114 aa11.36□□□□□ -0.59
C9orf78-201ENST00000372447 E9PLD3 99 aa11.36□□□□□ -0.59
C9orf78-201ENST00000372447 MAPKAPK5-AS1Q8N8E1 139 aa11.36□□□□□ -0.59
C9orf78-201ENST00000372447 PYGO1Q9Y3Y4 419 aa11.36□□□□□ -0.59
C9orf78-201ENST00000372447 IGLV4-3A0A075B6K6 122 aa11.35□□□□□ -0.59
C9orf78-201ENST00000372447 EMP1P54849 157 aa11.35□□□□□ -0.59
C9orf78-201ENST00000372447 SEC11AP67812 179 aa11.35□□□□□ -0.59
C9orf78-201ENST00000372447 A0A0J9YWU9 116 aa11.34□□□□□ -0.59
C9orf78-201ENST00000372447 LINC00469Q8N7U9 141 aa11.34□□□□□ -0.59
C9orf78-201ENST00000372447 PHLDA1Q8WV24 401 aaPredicted RBP11.34□□□□□ -0.59
C9orf78-201ENST00000372447 CHCHD7Q9BUK0 85 aa11.34□□□□□ -0.59
C9orf78-201ENST00000372447 COX11Q9Y6N1 276 aa11.34□□□□□ -0.59
C9orf78-201ENST00000372447 IGHV3-38A0A0C4DH36 116 aa11.33□□□□□ -0.59
C9orf78-201ENST00000372447 K7EQD1 137 aa11.33□□□□□ -0.59
C9orf78-201ENST00000372447 COTL1Q14019 142 aa11.33□□□□□ -0.59
C9orf78-201ENST00000372447 ZNRF2Q8NHG8 242 aa11.33□□□□□ -0.59
C9orf78-201ENST00000372447 ORAOV1Q8WV07 137 aa11.33□□□□□ -0.59
C9orf78-201ENST00000372447 CHAC1Q9BUX1 264 aa11.33□□□□□ -0.59
C9orf78-201ENST00000372447 TRBV10-1A0A0K0K1A3 114 aa11.33□□□□□ -0.6
C9orf78-201ENST00000372447 Q6ZVH6 145 aa11.33□□□□□ -0.6
C9orf78-201ENST00000372447 PRADC1Q9BSG0 188 aa11.33□□□□□ -0.6
C9orf78-201ENST00000372447 VCX2Q9H322 139 aa11.33□□□□□ -0.6
C9orf78-201ENST00000372447 TRBV7-3A0A075B6L6 115 aa11.32□□□□□ -0.6
C9orf78-201ENST00000372447 GAGE12BA1L429 117 aa11.32□□□□□ -0.6
C9orf78-201ENST00000372447 TAX1BP3O14907 124 aa11.32□□□□□ -0.6
C9orf78-201ENST00000372447 GAGE7O76087 117 aa11.32□□□□□ -0.6
C9orf78-201ENST00000372447 NPSP0C0P6 89 aa11.32□□□□□ -0.6
C9orf78-201ENST00000372447 GAGE12FP0CL80 117 aa11.32□□□□□ -0.6
C9orf78-201ENST00000372447 GAGE12GP0CL81 117 aa11.32□□□□□ -0.6
C9orf78-201ENST00000372447 GAGE12IP0CL82 117 aa11.32□□□□□ -0.6
C9orf78-201ENST00000372447 HERVK_113P61574 105 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms