RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 DEFB130BP0DP73 79 aa12.41□□□□□ -0.42
SSBP3-203ENST00000371319 DEFB130AP0DP74 79 aa12.41□□□□□ -0.42
SSBP3-203ENST00000371319 RPL36AP83881 106 aaKnown RBP12.41□□□□□ -0.42
SSBP3-203ENST00000371319 SAMD5Q5TGI4 173 aa12.41□□□□□ -0.42
SSBP3-203ENST00000371319 RPL36ALQ969Q0 106 aaKnown RBP12.41□□□□□ -0.42
SSBP3-203ENST00000371319 TRGV4A0A0C4DH28 118 aa12.4□□□□□ -0.42
SSBP3-203ENST00000371319 LYRM9A8MSI8 78 aa12.4□□□□□ -0.42
SSBP3-203ENST00000371319 DPM2O94777 84 aa12.4□□□□□ -0.42
SSBP3-203ENST00000371319 MIFP14174 115 aa12.4□□□□□ -0.42
SSBP3-203ENST00000371319 UBE2D3P61077 147 aa12.4□□□□□ -0.42
SSBP3-203ENST00000371319 UBE2D2P62837 147 aa12.4□□□□□ -0.42
SSBP3-203ENST00000371319 ANKRD39Q53RE8 183 aa12.4□□□□□ -0.42
SSBP3-203ENST00000371319 FAM222AQ5U5X8 452 aa12.4□□□□□ -0.42
SSBP3-203ENST00000371319 C14orf144Q96I85 54 aa12.4□□□□□ -0.42
SSBP3-203ENST00000371319 UQCR10Q9UDW1 63 aa12.4□□□□□ -0.42
SSBP3-203ENST00000371319 DNAH3Q8TD57 4116 aa12.4□□□□□ -0.42
SSBP3-203ENST00000371319 STAB1Q9NY15 2570 aa12.4□□□□□ -0.42
SSBP3-203ENST00000371319 GAGE12JA6NER3 117 aa12.39□□□□□ -0.43
SSBP3-203ENST00000371319 PRSS29PA6NIE9 313 aa12.39□□□□□ -0.43
SSBP3-203ENST00000371319 DEFB4AO15263 64 aa12.39□□□□□ -0.43
SSBP3-203ENST00000371319 GAGE1Q13065 139 aa12.39□□□□□ -0.43
SSBP3-203ENST00000371319 GAGE4Q13068 117 aa12.39□□□□□ -0.43
SSBP3-203ENST00000371319 GAGE5Q13069 117 aa12.39□□□□□ -0.43
SSBP3-203ENST00000371319 GAGE13Q4V321 117 aa12.39□□□□□ -0.43
SSBP3-203ENST00000371319 STPG4Q8N801 248 aa12.39□□□□□ -0.43
SSBP3-203ENST00000371319 CHTOPQ9Y3Y2 248 aaKnown RBP12.39□□□□□ -0.43
SSBP3-203ENST00000371319 LOC100131303A0A0U1RQF7 123 aa12.39□□□□□ -0.43
SSBP3-203ENST00000371319 F8VRH5 84 aa12.39□□□□□ -0.43
SSBP3-203ENST00000371319 COTL1Q14019 142 aa12.39□□□□□ -0.43
SSBP3-203ENST00000371319 HHLA3Q9XRX5 114 aa12.39□□□□□ -0.43
SSBP3-203ENST00000371319 DEFA6Q01524 100 aa12.38□□□□□ -0.43
SSBP3-203ENST00000371319 ZC2HC1BQ5TFG8 222 aa12.38□□□□□ -0.43
SSBP3-203ENST00000371319 DAZ4Q86SG3 579 aaKnown RBP12.37□□□□□ -0.43
SSBP3-203ENST00000371319 OPRPNQ99935 248 aaPredicted RBP12.37□□□□□ -0.43
SSBP3-203ENST00000371319 CST9LQ9H4G1 147 aa12.37□□□□□ -0.43
SSBP3-203ENST00000371319 DAZ3Q9NR90 486 aaKnown RBP12.37□□□□□ -0.43
SSBP3-203ENST00000371319 PMVKQ15126 192 aa12.36□□□□□ -0.43
SSBP3-203ENST00000371319 FAM104AQ969W3 186 aa12.36□□□□□ -0.43
SSBP3-203ENST00000371319 PYGO1Q9Y3Y4 419 aa12.36□□□□□ -0.43
SSBP3-203ENST00000371319 MAST4O15021 2626 aa12.36□□□□□ -0.43
SSBP3-203ENST00000371319 IGLV4-3A0A075B6K6 122 aa12.35□□□□□ -0.43
SSBP3-203ENST00000371319 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.35□□□□□ -0.43
SSBP3-203ENST00000371319 IGKV2-29A2NJV5 120 aaPredicted RBP12.35□□□□□ -0.43
SSBP3-203ENST00000371319 LINC00694P0DN24 101 aa12.35□□□□□ -0.43
SSBP3-203ENST00000371319 PLNP26678 52 aa12.35□□□□□ -0.43
SSBP3-203ENST00000371319 NTM-AS1Q6ZSK4 140 aa12.35□□□□□ -0.43
SSBP3-203ENST00000371319 TP73-AS1Q9UF72 201 aa12.35□□□□□ -0.43
SSBP3-203ENST00000371319 CELA1Q9UNI1 258 aa12.35□□□□□ -0.43
SSBP3-203ENST00000371319 MDFIQ99750 246 aa12.35□□□□□ -0.43
SSBP3-203ENST00000371319 PRADC1Q9BSG0 188 aa12.35□□□□□ -0.43
SSBP3-203ENST00000371319 ANK2Q01484 3957 aa12.34□□□□□ -0.43
SSBP3-203ENST00000371319 IGLV4-69A0A075B6H9 119 aa12.34□□□□□ -0.43
SSBP3-203ENST00000371319 COX8AP10176 69 aa12.34□□□□□ -0.43
SSBP3-203ENST00000371319 RETNQ9HD89 108 aa12.34□□□□□ -0.43
SSBP3-203ENST00000371319 UBE2D4Q9Y2X8 147 aa12.34□□□□□ -0.43
SSBP3-203ENST00000371319 TCTAP57738 103 aa12.33□□□□□ -0.44
SSBP3-203ENST00000371319 NPSP0C0P6 89 aa12.32□□□□□ -0.44
SSBP3-203ENST00000371319 FGF6P10767 208 aa12.32□□□□□ -0.44
SSBP3-203ENST00000371319 CRYBA4P53673 196 aa12.32□□□□□ -0.44
SSBP3-203ENST00000371319 SLC25A34Q6PIV7 304 aa12.32□□□□□ -0.44
SSBP3-203ENST00000371319 CEMP1Q6PRD7 247 aaPredicted RBP12.32□□□□□ -0.44
SSBP3-203ENST00000371319 SBSPONQ8IVN8 264 aa12.32□□□□□ -0.44
SSBP3-203ENST00000371319 GTSF1LQ9H1H1 148 aa12.32□□□□□ -0.44
SSBP3-203ENST00000371319 SPANXA1Q9NS26 97 aa12.32□□□□□ -0.44
SSBP3-203ENST00000371319 HNRNPA3P51991 378 aaKnown RBP12.31□□□□□ -0.44
SSBP3-203ENST00000371319 DAD1P61803 113 aa12.31□□□□□ -0.44
SSBP3-203ENST00000371319 AMELXQ99217 191 aa12.31□□□□□ -0.44
SSBP3-203ENST00000371319 IGKV2D-26A0A0A0MRZ7 120 aa12.3□□□□□ -0.44
SSBP3-203ENST00000371319 C11orf86A6NJI1 115 aa12.3□□□□□ -0.44
SSBP3-203ENST00000371319 SPART-AS1P0CW21 52 aa12.3□□□□□ -0.44
SSBP3-203ENST00000371319 CTAG1AP78358 180 aa12.3□□□□□ -0.44
SSBP3-203ENST00000371319 TIMM21Q9BVV7 248 aa12.3□□□□□ -0.44
SSBP3-203ENST00000371319 PRO0255Q9UI72 69 aa12.3□□□□□ -0.44
SSBP3-203ENST00000371319 PAPPA-AS1Q5QFB9 102 aa12.29□□□□□ -0.44
SSBP3-203ENST00000371319 VCX2Q9H322 139 aa12.29□□□□□ -0.44
SSBP3-203ENST00000371319 COL6A5A8TX70 2615 aa12.29□□□□□ -0.44
SSBP3-203ENST00000371319 GYPEP15421 78 aa12.28□□□□□ -0.44
SSBP3-203ENST00000371319 NMUP48645 174 aa12.28□□□□□ -0.44
SSBP3-203ENST00000371319 BOD1L2Q8IYS8 172 aa12.28□□□□□ -0.44
SSBP3-203ENST00000371319 MRPS16Q9Y3D3 137 aaKnown RBP12.28□□□□□ -0.44
SSBP3-203ENST00000371319 PKD1L1Q8TDX9 2849 aa12.28□□□□□ -0.44
SSBP3-203ENST00000371319 EREGO14944 169 aa12.27□□□□□ -0.44
SSBP3-203ENST00000371319 MRPS36P82909 103 aaKnown RBP12.27□□□□□ -0.44
SSBP3-203ENST00000371319 Q6ZUT4 128 aa12.27□□□□□ -0.44
SSBP3-203ENST00000371319 NFE4Q86UQ8 179 aa12.27□□□□□ -0.44
SSBP3-203ENST00000371319 PCP2Q8IVA1 136 aa12.27□□□□□ -0.44
SSBP3-203ENST00000371319 SNHG12Q9BXW3 62 aa12.27□□□□□ -0.44
SSBP3-203ENST00000371319 RNASE13Q5GAN3 156 aaKnown RBP12.26□□□□□ -0.45
SSBP3-203ENST00000371319 KPRPQ5T749 579 aaPredicted RBP12.26□□□□□ -0.45
SSBP3-203ENST00000371319 MRPL52Q86TS9 123 aaKnown RBP12.26□□□□□ -0.45
SSBP3-203ENST00000371319 NBEAL2Q6ZNJ1 2754 aa12.26□□□□□ -0.45
SSBP3-203ENST00000371319 DLEU1O43261 78 aa12.26□□□□□ -0.45
SSBP3-203ENST00000371319 PAX4O43316 350 aa12.26□□□□□ -0.45
SSBP3-203ENST00000371319 PRB2P02812 416 aaPredicted RBP12.26□□□□□ -0.45
SSBP3-203ENST00000371319 ATP5G1P05496 136 aa12.26□□□□□ -0.45
SSBP3-203ENST00000371319 C2orf91Q6ZV80 131 aa12.26□□□□□ -0.45
SSBP3-203ENST00000371319 VSIG2Q96IQ7 327 aa12.26□□□□□ -0.45
SSBP3-203ENST00000371319 TMEM243Q9BU79 118 aa12.26□□□□□ -0.45
SSBP3-203ENST00000371319 TEX48A0A1B0GUV7 120 aa12.25□□□□□ -0.45
SSBP3-203ENST00000371319 TRBV25-1A0A075B6N4 114 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms