RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 TIMM21Q9BVV7 248 aa8.52□□□□□ -1.05
SMARCA1-201ENST00000371121 TRAV12-2A0A075B6T6 113 aa8.51□□□□□ -1.05
SMARCA1-201ENST00000371121 A0A1W2PPR1 153 aa8.51□□□□□ -1.05
SMARCA1-201ENST00000371121 DNAJC30Q96LL9 226 aa8.51□□□□□ -1.05
SMARCA1-201ENST00000371121 IGHV3OR16-10A0A075B7F0 116 aa8.51□□□□□ -1.05
SMARCA1-201ENST00000371121 PRSS2P07478 247 aa8.51□□□□□ -1.05
SMARCA1-201ENST00000371121 HERVK_113P63121 156 aa8.5□□□□□ -1.05
SMARCA1-201ENST00000371121 NDUFA12Q9UI09 145 aa8.5□□□□□ -1.05
SMARCA1-201ENST00000371121 ACACAQ13085 2346 aa8.5□□□□□ -1.05
SMARCA1-201ENST00000371121 NIPBLQ6KC79 2804 aaeCLIP8.5□□□□□ -1.05
SMARCA1-201ENST00000371121 RBMY1A1P0DJD3 496 aaKnown RBP8.5□□□□□ -1.05
SMARCA1-201ENST00000371121 RBMY1CP0DJD4 496 aa8.5□□□□□ -1.05
SMARCA1-201ENST00000371121 RBMY1FQ15415 496 aaKnown RBP8.5□□□□□ -1.05
SMARCA1-201ENST00000371121 LINC00526Q96FQ7 95 aa8.5□□□□□ -1.05
SMARCA1-201ENST00000371121 TLN1Q9Y490 2541 aaKnown RBP8.49□□□□□ -1.05
SMARCA1-201ENST00000371121 Q6ZSN1 163 aa8.49□□□□□ -1.05
SMARCA1-201ENST00000371121 IMUPQ9GZP8 106 aa8.49□□□□□ -1.05
SMARCA1-201ENST00000371121 ZNF469Q96JG9 3925 aaPredicted RBP8.49□□□□□ -1.05
SMARCA1-201ENST00000371121 NDUFA4O00483 81 aa8.48□□□□□ -1.05
SMARCA1-201ENST00000371121 PRM2P04554 102 aa8.48□□□□□ -1.05
SMARCA1-201ENST00000371121 PYGO1Q9Y3Y4 419 aa8.48□□□□□ -1.05
SMARCA1-201ENST00000371121 MXRA5Q9NR99 2828 aa8.48□□□□□ -1.05
SMARCA1-201ENST00000371121 FAM19A5Q7Z5A7 132 aaPredicted RBP8.48□□□□□ -1.05
SMARCA1-201ENST00000371121 TMEM101Q96IK0 257 aa8.48□□□□□ -1.05
SMARCA1-201ENST00000371121 CHCHD7Q9BUK0 85 aa8.48□□□□□ -1.05
SMARCA1-201ENST00000371121 SPANXA1Q9NS26 97 aa8.48□□□□□ -1.05
SMARCA1-201ENST00000371121 NPFFO15130 113 aa8.48□□□□□ -1.05
SMARCA1-201ENST00000371121 TRAV41A0A0B4J266 112 aa8.47□□□□□ -1.05
SMARCA1-201ENST00000371121 IGHV3-11P01762 117 aa8.47□□□□□ -1.05
SMARCA1-201ENST00000371121 COX6A2Q02221 97 aa8.47□□□□□ -1.05
SMARCA1-201ENST00000371121 DAZ2Q13117 558 aaKnown RBP8.47□□□□□ -1.05
SMARCA1-201ENST00000371121 DAZ4Q86SG3 579 aaKnown RBP8.47□□□□□ -1.05
SMARCA1-201ENST00000371121 DAZ1Q9NQZ3 744 aaKnown RBP8.47□□□□□ -1.05
SMARCA1-201ENST00000371121 DAZ3Q9NR90 486 aaKnown RBP8.47□□□□□ -1.05
SMARCA1-201ENST00000371121 RHPN1-AS1Q9BWJ2 59 aa8.47□□□□□ -1.05
SMARCA1-201ENST00000371121 UBE2D4Q9Y2X8 147 aa8.47□□□□□ -1.05
SMARCA1-201ENST00000371121 GVINP1Q7Z2Y8 2422 aa8.47□□□□□ -1.05
SMARCA1-201ENST00000371121 UQCRQO14949 82 aa8.46□□□□□ -1.06
SMARCA1-201ENST00000371121 FAM223BA6NKX1 122 aa8.46□□□□□ -1.06
SMARCA1-201ENST00000371121 C9orf153Q5TBE3 101 aa8.46□□□□□ -1.06
SMARCA1-201ENST00000371121 FAM223AQ8IWN6 122 aa8.46□□□□□ -1.06
SMARCA1-201ENST00000371121 TINCRA0A1B0GVN0 87 aa8.45□□□□□ -1.06
SMARCA1-201ENST00000371121 TIRAPP58753 221 aa8.45□□□□□ -1.06
SMARCA1-201ENST00000371121 UPK3BQ9BT76 320 aa8.45□□□□□ -1.06
SMARCA1-201ENST00000371121 CDKN2A-AS1Q9UH64 79 aa8.45□□□□□ -1.06
SMARCA1-201ENST00000371121 KIR2DL5BQ8NHK3 375 aa8.45□□□□□ -1.06
SMARCA1-201ENST00000371121 IGHV3-73A0A0B4J1V6 119 aa8.45□□□□□ -1.06
SMARCA1-201ENST00000371121 CD28P10747 220 aa8.45□□□□□ -1.06
SMARCA1-201ENST00000371121 LINC00308Q8TCZ7 52 aa8.45□□□□□ -1.06
SMARCA1-201ENST00000371121 CRYGAP11844 174 aa8.44□□□□□ -1.06
SMARCA1-201ENST00000371121 LINC00643Q86TS7 51 aa8.44□□□□□ -1.06
SMARCA1-201ENST00000371121 ZANQ9Y493 2812 aa8.44□□□□□ -1.06
SMARCA1-201ENST00000371121 IGLV5-45A0A087WSX0 123 aa8.43□□□□□ -1.06
SMARCA1-201ENST00000371121 COX7A2LO14548 114 aa8.43□□□□□ -1.06
SMARCA1-201ENST00000371121 EDA2RQ9HAV5 297 aa8.43□□□□□ -1.06
SMARCA1-201ENST00000371121 TIMM17BO60830 172 aa8.43□□□□□ -1.06
SMARCA1-201ENST00000371121 IGKV3-20P01619 116 aa8.43□□□□□ -1.06
SMARCA1-201ENST00000371121 COX7CP15954 63 aa8.43□□□□□ -1.06
SMARCA1-201ENST00000371121 LINC00467Q9BRT7 94 aa8.43□□□□□ -1.06
SMARCA1-201ENST00000371121 UTP20O75691 2785 aaKnown RBP8.42□□□□□ -1.06
SMARCA1-201ENST00000371121 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.42□□□□□ -1.06
SMARCA1-201ENST00000371121 IGKV2-29A2NJV5 120 aaPredicted RBP8.42□□□□□ -1.06
SMARCA1-201ENST00000371121 SMIM9A6NGZ8 99 aa8.42□□□□□ -1.06
SMARCA1-201ENST00000371121 NDUFA1O15239 70 aa8.42□□□□□ -1.06
SMARCA1-201ENST00000371121 A0A1B0GX51 115 aa8.42□□□□□ -1.06
SMARCA1-201ENST00000371121 ACYP1P07311 99 aa8.42□□□□□ -1.06
SMARCA1-201ENST00000371121 COX6CP09669 75 aa8.42□□□□□ -1.06
SMARCA1-201ENST00000371121 PEMTQ9UBM1 199 aa8.42□□□□□ -1.06
SMARCA1-201ENST00000371121 SORL1Q92673 2214 aa8.41□□□□□ -1.06
SMARCA1-201ENST00000371121 ITPR1Q14643 2758 aa8.41□□□□□ -1.06
SMARCA1-201ENST00000371121 LMO4P61968 165 aa8.41□□□□□ -1.06
SMARCA1-201ENST00000371121 SPINK13Q1W4C9 94 aa8.41□□□□□ -1.06
SMARCA1-201ENST00000371121 IGLV5-39A0A0G2JS06 123 aa8.41□□□□□ -1.06
SMARCA1-201ENST00000371121 hADV29S1A0JD25 119 aa8.41□□□□□ -1.06
SMARCA1-201ENST00000371121 LRRC75A-AS1Q8N1F1 130 aa8.41□□□□□ -1.06
SMARCA1-201ENST00000371121 CEP295Q9C0D2 2601 aa8.4□□□□□ -1.06
SMARCA1-201ENST00000371121 CXCL5P42830 114 aa8.4□□□□□ -1.06
SMARCA1-201ENST00000371121 SPTAN1Q13813 2472 aaKnown RBP8.4□□□□□ -1.07
SMARCA1-201ENST00000371121 CFHR3Q02985 330 aa8.4□□□□□ -1.07
SMARCA1-201ENST00000371121 FBXL19-AS1Q494R0 122 aa8.4□□□□□ -1.07
SMARCA1-201ENST00000371121 ZNF625Q96I27 306 aaPredicted RBP8.4□□□□□ -1.07
SMARCA1-201ENST00000371121 Q9HAA7 133 aa8.4□□□□□ -1.07
SMARCA1-201ENST00000371121 PTPRZ1P23471 2315 aaPredicted RBP8.39□□□□□ -1.07
SMARCA1-201ENST00000371121 IGHV3OR16-12A0A075B7B8 117 aa8.39□□□□□ -1.07
SMARCA1-201ENST00000371121 IGHV1OR15-1A0A075B7D0 117 aa8.39□□□□□ -1.07
SMARCA1-201ENST00000371121 IGLV1-40P01703 118 aa8.39□□□□□ -1.07
SMARCA1-201ENST00000371121 BLCAPP62952 87 aa8.39□□□□□ -1.07
SMARCA1-201ENST00000371121 A0A0U1RRA0 63 aa8.39□□□□□ -1.07
SMARCA1-201ENST00000371121 C5orf47Q569G3 176 aa8.39□□□□□ -1.07
SMARCA1-201ENST00000371121 Q5XG85 94 aa8.39□□□□□ -1.07
SMARCA1-201ENST00000371121 LINC01561Q8N1V8 128 aa8.39□□□□□ -1.07
SMARCA1-201ENST00000371121 COL6A6A6NMZ7 2263 aa8.38□□□□□ -1.07
SMARCA1-201ENST00000371121 MOB4Q9Y3A3 225 aa8.38□□□□□ -1.07
SMARCA1-201ENST00000371121 BRD3OSQ6XYD6 125 aa8.38□□□□□ -1.07
SMARCA1-201ENST00000371121 A0A087WVE0 104 aa8.38□□□□□ -1.07
SMARCA1-201ENST00000371121 BAALC-AS2P0C853 105 aa8.38□□□□□ -1.07
SMARCA1-201ENST00000371121 C10orf99Q6UWK7 81 aa8.38□□□□□ -1.07
SMARCA1-201ENST00000371121 KNCNA6PVL3 124 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 RNF152Q8N8N0 203 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 DPH3Q96FX2 82 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms