RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 SPTBN1Q01082 2364 aaKnown RBP6.92□□□□□ -1.3
HMGCLL1-204ENST00000370852 HRNRQ86YZ3 2850 aaPredicted RBP6.92□□□□□ -1.3
HMGCLL1-204ENST00000370852 M0QY20 66 aa6.92□□□□□ -1.3
HMGCLL1-204ENST00000370852 IGHV1-69P01742 117 aa6.92□□□□□ -1.3
HMGCLL1-204ENST00000370852 IGHG2P01859 326 aa6.92□□□□□ -1.3
HMGCLL1-204ENST00000370852 ACYP1P07311 99 aa6.92□□□□□ -1.3
HMGCLL1-204ENST00000370852 PROK1P58294 105 aa6.92□□□□□ -1.3
HMGCLL1-204ENST00000370852 PEMTQ9UBM1 199 aa6.91□□□□□ -1.3
HMGCLL1-204ENST00000370852 PYGO1Q9Y3Y4 419 aa6.91□□□□□ -1.3
HMGCLL1-204ENST00000370852 IGHV1-58A0A0C4DH39 117 aa6.91□□□□□ -1.3
HMGCLL1-204ENST00000370852 PPP1R17O96001 155 aa6.91□□□□□ -1.3
HMGCLL1-204ENST00000370852 IGKV3-20P01619 116 aa6.91□□□□□ -1.3
HMGCLL1-204ENST00000370852 DEFB109BQ30KR1 87 aa6.91□□□□□ -1.3
HMGCLL1-204ENST00000370852 SOSTDC1Q6X4U4 206 aa6.91□□□□□ -1.3
HMGCLL1-204ENST00000370852 Q8N9W7 124 aa6.91□□□□□ -1.3
HMGCLL1-204ENST00000370852 CUL9Q8IWT3 2517 aa6.91□□□□□ -1.3
HMGCLL1-204ENST00000370852 TRAV12-2A0A075B6T6 113 aa6.9□□□□□ -1.3
HMGCLL1-204ENST00000370852 CD28P10747 220 aa6.9□□□□□ -1.3
HMGCLL1-204ENST00000370852 FHL2Q14192 279 aa6.9□□□□□ -1.3
HMGCLL1-204ENST00000370852 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.9□□□□□ -1.3
HMGCLL1-204ENST00000370852 MRPL53Q96EL3 112 aaKnown RBP6.9□□□□□ -1.3
HMGCLL1-204ENST00000370852 VSIG2Q96IQ7 327 aa6.9□□□□□ -1.3
HMGCLL1-204ENST00000370852 U3KQE9 123 aa6.9□□□□□ -1.3
HMGCLL1-204ENST00000370852 CRYBG3Q68DQ2 2970 aa6.9□□□□□ -1.3
HMGCLL1-204ENST00000370852 RPL18AQ02543 176 aaKnown RBP6.9□□□□□ -1.31
HMGCLL1-204ENST00000370852 LINC01561Q8N1V8 128 aa6.9□□□□□ -1.31
HMGCLL1-204ENST00000370852 WFDC9Q8NEX5 89 aa6.9□□□□□ -1.31
HMGCLL1-204ENST00000370852 COX7A2LO14548 114 aa6.89□□□□□ -1.31
HMGCLL1-204ENST00000370852 HILS1P60008 231 aa6.89□□□□□ -1.31
HMGCLL1-204ENST00000370852 FAM223AQ8IWN6 122 aa6.89□□□□□ -1.31
HMGCLL1-204ENST00000370852 Q8N6K4 173 aa6.89□□□□□ -1.31
HMGCLL1-204ENST00000370852 GVINP1Q7Z2Y8 2422 aa6.89□□□□□ -1.31
HMGCLL1-204ENST00000370852 SORL1Q92673 2214 aa6.89□□□□□ -1.31
HMGCLL1-204ENST00000370852 ATOX1O00244 68 aa6.89□□□□□ -1.31
HMGCLL1-204ENST00000370852 SOCS3O14543 225 aa6.89□□□□□ -1.31
HMGCLL1-204ENST00000370852 PRM2P04554 102 aa6.89□□□□□ -1.31
HMGCLL1-204ENST00000370852 CXCL5P42830 114 aa6.89□□□□□ -1.31
HMGCLL1-204ENST00000370852 CIRBPQ14011 172 aaKnown RBP6.89□□□□□ -1.31
HMGCLL1-204ENST00000370852 C14orf132Q9NPU4 83 aa6.89□□□□□ -1.31
HMGCLL1-204ENST00000370852 FAM223BA6NKX1 122 aa6.88□□□□□ -1.31
HMGCLL1-204ENST00000370852 MRPS36P82909 103 aaKnown RBP6.88□□□□□ -1.31
HMGCLL1-204ENST00000370852 FAM110DQ8TAY7 271 aaPredicted RBP6.88□□□□□ -1.31
HMGCLL1-204ENST00000370852 LINC00846Q9NV44 126 aa6.88□□□□□ -1.31
HMGCLL1-204ENST00000370852 TRBV6-5A0A0K0K1A5 114 aa6.88□□□□□ -1.31
HMGCLL1-204ENST00000370852 ODF3BA8MYP8 253 aa6.88□□□□□ -1.31
HMGCLL1-204ENST00000370852 ATP5G1P05496 136 aa6.88□□□□□ -1.31
HMGCLL1-204ENST00000370852 C9orf139Q6ZV77 190 aa6.88□□□□□ -1.31
HMGCLL1-204ENST00000370852 LINC00308Q8TCZ7 52 aa6.88□□□□□ -1.31
HMGCLL1-204ENST00000370852 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.87□□□□□ -1.31
HMGCLL1-204ENST00000370852 IGKV2-29A2NJV5 120 aaPredicted RBP6.87□□□□□ -1.31
HMGCLL1-204ENST00000370852 MED14OSP0DP75 135 aa6.87□□□□□ -1.31
HMGCLL1-204ENST00000370852 TMEM258P61165 79 aa6.87□□□□□ -1.31
HMGCLL1-204ENST00000370852 COX6A2Q02221 97 aa6.87□□□□□ -1.31
HMGCLL1-204ENST00000370852 IGFL2Q6UWQ7 119 aa6.87□□□□□ -1.31
HMGCLL1-204ENST00000370852 LINC00336Q6ZUF6 198 aa6.87□□□□□ -1.31
HMGCLL1-204ENST00000370852 CDKN2A-AS1Q9UH64 79 aa6.87□□□□□ -1.31
HMGCLL1-204ENST00000370852 LENEPQ9Y5L5 61 aa6.87□□□□□ -1.31
HMGCLL1-204ENST00000370852 SERP2Q8N6R1 65 aa6.87□□□□□ -1.31
HMGCLL1-204ENST00000370852 PIK3CD-AS1Q5SR53 167 aa6.86□□□□□ -1.31
HMGCLL1-204ENST00000370852 LY6G5BQ8NDX9 201 aa6.86□□□□□ -1.31
HMGCLL1-204ENST00000370852 USP17L23D6RBM5 183 aa6.86□□□□□ -1.31
HMGCLL1-204ENST00000370852 IGHV3-11P01762 117 aa6.86□□□□□ -1.31
HMGCLL1-204ENST00000370852 AKAP6Q13023 2319 aa6.85□□□□□ -1.31
HMGCLL1-204ENST00000370852 TRIOBPQ9H2D6 2365 aa6.85□□□□□ -1.31
HMGCLL1-204ENST00000370852 IGHV3-38A0A0C4DH36 116 aa6.85□□□□□ -1.31
HMGCLL1-204ENST00000370852 KNCNA6PVL3 124 aa6.85□□□□□ -1.31
HMGCLL1-204ENST00000370852 MAP1AP78559 2803 aaPredicted RBP6.85□□□□□ -1.31
HMGCLL1-204ENST00000370852 A0A087WYN8 130 aa6.85□□□□□ -1.31
HMGCLL1-204ENST00000370852 IGHV3-16A0A0C4DH30 117 aa6.85□□□□□ -1.31
HMGCLL1-204ENST00000370852 SYNJ2BPP57105 145 aa6.85□□□□□ -1.31
HMGCLL1-204ENST00000370852 PRIMA1Q86XR5 153 aa6.85□□□□□ -1.31
HMGCLL1-204ENST00000370852 Q9H8V8 135 aa6.85□□□□□ -1.31
HMGCLL1-204ENST00000370852 PKIGQ9Y2B9 76 aa6.85□□□□□ -1.31
HMGCLL1-204ENST00000370852 HTN1P15515 57 aa6.84□□□□□ -1.31
HMGCLL1-204ENST00000370852 MALP21145 153 aa6.84□□□□□ -1.31
HMGCLL1-204ENST00000370852 APRG1Q8IVJ8 170 aa6.84□□□□□ -1.31
HMGCLL1-204ENST00000370852 COL6A6A6NMZ7 2263 aa6.84□□□□□ -1.31
HMGCLL1-204ENST00000370852 ANKRD11Q6UB99 2663 aaPredicted RBP6.84□□□□□ -1.31
HMGCLL1-204ENST00000370852 SPTA1P02549 2419 aa6.84□□□□□ -1.32
HMGCLL1-204ENST00000370852 KLLNB2CW77 178 aa6.84□□□□□ -1.32
HMGCLL1-204ENST00000370852 J3QLI3 93 aa6.84□□□□□ -1.32
HMGCLL1-204ENST00000370852 NCR3O14931 201 aa6.84□□□□□ -1.32
HMGCLL1-204ENST00000370852 Q6ZSN1 163 aa6.84□□□□□ -1.32
HMGCLL1-204ENST00000370852 TINCRA0A1B0GVN0 87 aa6.83□□□□□ -1.32
HMGCLL1-204ENST00000370852 SLPIP03973 132 aa6.83□□□□□ -1.32
HMGCLL1-204ENST00000370852 RPL35AP18077 110 aaKnown RBP6.82□□□□□ -1.32
HMGCLL1-204ENST00000370852 ZFP36P26651 326 aaKnown RBP6.82□□□□□ -1.32
HMGCLL1-204ENST00000370852 PFN2P35080 140 aa6.82□□□□□ -1.32
HMGCLL1-204ENST00000370852 RPL28P46779 137 aaKnown RBP6.82□□□□□ -1.32
HMGCLL1-204ENST00000370852 C9orf85Q96MD7 179 aa6.82□□□□□ -1.32
HMGCLL1-204ENST00000370852 TRAV23DV6A0A075B6W5 121 aa6.82□□□□□ -1.32
HMGCLL1-204ENST00000370852 LINC01560Q8TB33 94 aa6.82□□□□□ -1.32
HMGCLL1-204ENST00000370852 LINC00467Q9BRT7 94 aa6.82□□□□□ -1.32
HMGCLL1-204ENST00000370852 AVPP01185 164 aa6.81□□□□□ -1.32
HMGCLL1-204ENST00000370852 MINOS1Q5TGZ0 78 aa6.81□□□□□ -1.32
HMGCLL1-204ENST00000370852 C1orf43Q9BWL3 253 aa6.81□□□□□ -1.32
HMGCLL1-204ENST00000370852 DOPEY2Q9Y3R5 2298 aa6.81□□□□□ -1.32
HMGCLL1-204ENST00000370852 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.81□□□□□ -1.32
HMGCLL1-204ENST00000370852 NDUFA1O15239 70 aa6.81□□□□□ -1.32
HMGCLL1-204ENST00000370852 DNAL4O96015 105 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms