RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 EIF5AP63241 154 aaKnown RBP8.36□□□□□ -1.07
RPF1-201ENST00000370654 MEF2BQ02080 365 aaPredicted RBP8.36□□□□□ -1.07
RPF1-201ENST00000370654 CLRN3Q8NCR9 226 aa8.36□□□□□ -1.07
RPF1-201ENST00000370654 NIT2Q9NQR4 276 aa8.36□□□□□ -1.07
RPF1-201ENST00000370654 MED9Q9NWA0 146 aa8.36□□□□□ -1.07
RPF1-201ENST00000370654 K7EN84 100 aa8.35□□□□□ -1.07
RPF1-201ENST00000370654 CTRLP40313 264 aa8.35□□□□□ -1.07
RPF1-201ENST00000370654 C9orf62Q8N4C0 152 aa8.35□□□□□ -1.07
RPF1-201ENST00000370654 C15orf56Q8N910 161 aa8.35□□□□□ -1.07
RPF1-201ENST00000370654 GATD1Q8NB37 220 aa8.35□□□□□ -1.07
RPF1-201ENST00000370654 PGLYRP4Q96LB8 373 aa8.35□□□□□ -1.07
RPF1-201ENST00000370654 RNASE7Q9H1E1 156 aaKnown RBP8.35□□□□□ -1.07
RPF1-201ENST00000370654 DPH3P1Q9H4G8 78 aa8.35□□□□□ -1.07
RPF1-201ENST00000370654 A0A087WYN8 130 aa8.35□□□□□ -1.07
RPF1-201ENST00000370654 TRAV8-4A0A0B4J246 113 aa8.35□□□□□ -1.07
RPF1-201ENST00000370654 F2Z2F3 143 aa8.35□□□□□ -1.07
RPF1-201ENST00000370654 TRGC1P0CF51 173 aa8.35□□□□□ -1.07
RPF1-201ENST00000370654 BCL2P10415 239 aa8.35□□□□□ -1.07
RPF1-201ENST00000370654 Q6ZNX1 250 aa8.35□□□□□ -1.07
RPF1-201ENST00000370654 RPL39LQ96EH5 51 aaKnown RBP8.35□□□□□ -1.07
RPF1-201ENST00000370654 SMIM12Q96EX1 92 aa8.35□□□□□ -1.07
RPF1-201ENST00000370654 PLA2G2DQ9UNK4 145 aa8.35□□□□□ -1.07
RPF1-201ENST00000370654 IGKV3OR2-268A0A0C4DH90 116 aa8.34□□□□□ -1.07
RPF1-201ENST00000370654 GAGE12HA6NDE8 117 aa8.34□□□□□ -1.07
RPF1-201ENST00000370654 PDE6DO43924 150 aa8.34□□□□□ -1.07
RPF1-201ENST00000370654 AMTP48728 403 aa8.34□□□□□ -1.07
RPF1-201ENST00000370654 OCC1Q8TAD7 63 aa8.34□□□□□ -1.07
RPF1-201ENST00000370654 SPACA4Q8TDM5 124 aa8.34□□□□□ -1.07
RPF1-201ENST00000370654 GTSF1Q8WW33 167 aa8.34□□□□□ -1.07
RPF1-201ENST00000370654 IGHV3-64A0A075B6Q5 118 aa8.33□□□□□ -1.08
RPF1-201ENST00000370654 COTL1Q14019 142 aa8.33□□□□□ -1.08
RPF1-201ENST00000370654 TWIST1Q15672 202 aa8.33□□□□□ -1.08
RPF1-201ENST00000370654 CNFNQ9BYD5 112 aa8.33□□□□□ -1.08
RPF1-201ENST00000370654 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.32□□□□□ -1.08
RPF1-201ENST00000370654 IGKV2-29A2NJV5 120 aaPredicted RBP8.32□□□□□ -1.08
RPF1-201ENST00000370654 XKRY2A2RUG3 117 aa8.32□□□□□ -1.08
RPF1-201ENST00000370654 GAS8-AS1O95177 125 aa8.32□□□□□ -1.08
RPF1-201ENST00000370654 HIGD2BQ4VC39 106 aa8.32□□□□□ -1.08
RPF1-201ENST00000370654 WDR73Q6P4I2 378 aa8.32□□□□□ -1.08
RPF1-201ENST00000370654 RPP21Q9H633 154 aaKnown RBP8.32□□□□□ -1.08
RPF1-201ENST00000370654 UBE2L6O14933 153 aa8.31□□□□□ -1.08
RPF1-201ENST00000370654 PRSS3P2Q8NHM4 247 aa8.31□□□□□ -1.08
RPF1-201ENST00000370654 DPH3Q96FX2 82 aa8.31□□□□□ -1.08
RPF1-201ENST00000370654 TNXBP22105 4242 aa8.3□□□□□ -1.08
RPF1-201ENST00000370654 COX6A2Q02221 97 aa8.3□□□□□ -1.08
RPF1-201ENST00000370654 CHCHD10Q8WYQ3 142 aaPredicted RBP8.3□□□□□ -1.08
RPF1-201ENST00000370654 AP5S1Q9NUS5 200 aa8.3□□□□□ -1.08
RPF1-201ENST00000370654 FAM231BA6NCW3 169 aa8.29□□□□□ -1.08
RPF1-201ENST00000370654 TEX46H3BTG2 121 aa8.29□□□□□ -1.08
RPF1-201ENST00000370654 PHOX2AO14813 284 aa8.29□□□□□ -1.08
RPF1-201ENST00000370654 ODF1Q14990 250 aa8.29□□□□□ -1.08
RPF1-201ENST00000370654 LCE2CQ5TA81 110 aa8.29□□□□□ -1.08
RPF1-201ENST00000370654 EIF5AL1Q6IS14 154 aaKnown RBP8.29□□□□□ -1.08
RPF1-201ENST00000370654 BIN3Q9NQY0 253 aa8.29□□□□□ -1.08
RPF1-201ENST00000370654 PLAC8Q9NZF1 115 aa8.29□□□□□ -1.08
RPF1-201ENST00000370654 TMA7Q9Y2S6 64 aaKnown RBP8.29□□□□□ -1.08
RPF1-201ENST00000370654 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.28□□□□□ -1.08
RPF1-201ENST00000370654 LOC100996750A0A140TA64 210 aa8.28□□□□□ -1.08
RPF1-201ENST00000370654 FOXI1Q12951 378 aa8.28□□□□□ -1.08
RPF1-201ENST00000370654 Q6ZRU5 148 aa8.28□□□□□ -1.08
RPF1-201ENST00000370654 SLC51BQ86UW2 128 aa8.28□□□□□ -1.08
RPF1-201ENST00000370654 TCTE3Q8IZS6 198 aa8.28□□□□□ -1.08
RPF1-201ENST00000370654 KRTAP4-6Q9BYQ5 205 aa8.28□□□□□ -1.08
RPF1-201ENST00000370654 FGF6P10767 208 aa8.27□□□□□ -1.09
RPF1-201ENST00000370654 RPS10P46783 165 aaKnown RBP8.27□□□□□ -1.09
RPF1-201ENST00000370654 RNASEKQ6P5S7 137 aaKnown RBP8.27□□□□□ -1.09
RPF1-201ENST00000370654 LINC00526Q96FQ7 95 aa8.27□□□□□ -1.09
RPF1-201ENST00000370654 IGKV2-24A0A0C4DH68 120 aa8.26□□□□□ -1.09
RPF1-201ENST00000370654 SDHAF1A6NFY7 115 aa8.26□□□□□ -1.09
RPF1-201ENST00000370654 MAJINQ3KP22 176 aa8.26□□□□□ -1.09
RPF1-201ENST00000370654 AMMECR1LQ6DCA0 310 aa8.26□□□□□ -1.09
RPF1-201ENST00000370654 RNF185Q96GF1 192 aa8.26□□□□□ -1.09
RPF1-201ENST00000370654 A0A096LNI7 61 aa8.25□□□□□ -1.09
RPF1-201ENST00000370654 GVQW2A0A096LPI5 108 aaPredicted RBP8.25□□□□□ -1.09
RPF1-201ENST00000370654 APCSP02743 223 aa8.25□□□□□ -1.09
RPF1-201ENST00000370654 GATCO43716 136 aaKnown RBP8.24□□□□□ -1.09
RPF1-201ENST00000370654 NDUFS6O75380 124 aaKnown RBP8.24□□□□□ -1.09
RPF1-201ENST00000370654 NCR2O95944 276 aa8.24□□□□□ -1.09
RPF1-201ENST00000370654 TSHBP01222 138 aa8.24□□□□□ -1.09
RPF1-201ENST00000370654 CFAP161Q6P656 301 aa8.24□□□□□ -1.09
RPF1-201ENST00000370654 LYPD6BQ8NI32 183 aa8.24□□□□□ -1.09
RPF1-201ENST00000370654 ESDP10768 282 aa8.23□□□□□ -1.09
RPF1-201ENST00000370654 XCL1P47992 114 aa8.23□□□□□ -1.09
RPF1-201ENST00000370654 ALKAL2Q6UX46 152 aa8.23□□□□□ -1.09
RPF1-201ENST00000370654 TMEM242Q9NWH2 141 aa8.23□□□□□ -1.09
RPF1-201ENST00000370654 LRP2P98164 4655 aa8.23□□□□□ -1.09
RPF1-201ENST00000370654 TRBV6-5A0A0K0K1A5 114 aa8.22□□□□□ -1.09
RPF1-201ENST00000370654 LINC00959A0A1B0GUT2 108 aa8.22□□□□□ -1.09
RPF1-201ENST00000370654 H7C423 109 aa8.22□□□□□ -1.09
RPF1-201ENST00000370654 I3L3M4 83 aa8.22□□□□□ -1.09
RPF1-201ENST00000370654 CCL25O15444 150 aa8.22□□□□□ -1.09
RPF1-201ENST00000370654 PMCHP20382 165 aa8.22□□□□□ -1.09
RPF1-201ENST00000370654 TAGLN2P37802 199 aaKnown RBP8.22□□□□□ -1.09
RPF1-201ENST00000370654 PRR3P79522 188 aaKnown RBP8.22□□□□□ -1.09
RPF1-201ENST00000370654 FAM231DQ6ZW35 169 aa8.22□□□□□ -1.09
RPF1-201ENST00000370654 STPG4Q8N801 248 aa8.22□□□□□ -1.09
RPF1-201ENST00000370654 OR5A1Q8NGJ0 315 aa8.22□□□□□ -1.09
RPF1-201ENST00000370654 CEBPGP53567 150 aa8.22□□□□□ -1.09
RPF1-201ENST00000370654 A8MWL6 223 aa8.21□□□□□ -1.1
RPF1-201ENST00000370654 TMEM250H0YL14 139 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms