RNA–Protein interactions for RNA: ENST00000370367.3

KHDC3L-201, Transcript of KH domain containing 3 like, subcortical maternal complex member, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KHDC3L, Length 1,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC3L-201ENST00000370367 FAM30AQ9NZY2 134 aa13.67□□□□□ -0.22
KHDC3L-201ENST00000370367 VPS13BQ7Z7G8 4022 aa13.67□□□□□ -0.22
KHDC3L-201ENST00000370367 FAM74A3Q4VXF1 159 aa13.66□□□□□ -0.22
KHDC3L-201ENST00000370367 TRAV8-4A0A0B4J246 113 aa13.65□□□□□ -0.22
KHDC3L-201ENST00000370367 TRAV26-2A0A0B4J265 109 aa13.65□□□□□ -0.22
KHDC3L-201ENST00000370367 FAM229AH3BQW9 127 aa13.65□□□□□ -0.22
KHDC3L-201ENST00000370367 NCR2O95944 276 aa13.65□□□□□ -0.22
KHDC3L-201ENST00000370367 AMTP48728 403 aa13.65□□□□□ -0.22
KHDC3L-201ENST00000370367 REG3AQ06141 175 aa13.65□□□□□ -0.22
KHDC3L-201ENST00000370367 C20orf203Q8NBC4 194 aa13.65□□□□□ -0.22
KHDC3L-201ENST00000370367 UBE2L6O14933 153 aa13.64□□□□□ -0.23
KHDC3L-201ENST00000370367 A0A1B0GUT8 65 aa13.63□□□□□ -0.23
KHDC3L-201ENST00000370367 HIGD1CA8MV81 97 aa13.63□□□□□ -0.23
KHDC3L-201ENST00000370367 USP17L23D6RBM5 183 aa13.63□□□□□ -0.23
KHDC3L-201ENST00000370367 HLA-DQA1P01909 254 aa13.63□□□□□ -0.23
KHDC3L-201ENST00000370367 SMR3BP02814 79 aaPredicted RBP13.63□□□□□ -0.23
KHDC3L-201ENST00000370367 HAMPP81172 84 aa13.63□□□□□ -0.23
KHDC3L-201ENST00000370367 KRTAP26-1Q6PEX3 210 aa13.63□□□□□ -0.23
KHDC3L-201ENST00000370367 CLPSL2Q6UWE3 100 aa13.63□□□□□ -0.23
KHDC3L-201ENST00000370367 SMDT1Q9H4I9 107 aa13.62□□□□□ -0.23
KHDC3L-201ENST00000370367 IGLV4-60A0A075B6I1 120 aa13.61□□□□□ -0.23
KHDC3L-201ENST00000370367 TRBV6-5A0A0K0K1A5 114 aa13.61□□□□□ -0.23
KHDC3L-201ENST00000370367 TMEM241Q24JQ0 296 aa13.61□□□□□ -0.23
KHDC3L-201ENST00000370367 RPL39LQ96EH5 51 aaKnown RBP13.61□□□□□ -0.23
KHDC3L-201ENST00000370367 TMEM191AQ9H0A3 160 aa13.61□□□□□ -0.23
KHDC3L-201ENST00000370367 SDHAF1A6NFY7 115 aa13.6□□□□□ -0.23
KHDC3L-201ENST00000370367 H7C423 109 aa13.6□□□□□ -0.23
KHDC3L-201ENST00000370367 INAFM2P0DMQ5 153 aa13.6□□□□□ -0.23
KHDC3L-201ENST00000370367 ISOC2Q96AB3 205 aa13.6□□□□□ -0.23
KHDC3L-201ENST00000370367 V9GYV3 84 aa13.6□□□□□ -0.23
KHDC3L-201ENST00000370367 PEA15Q15121 130 aa13.59□□□□□ -0.23
KHDC3L-201ENST00000370367 DGAT2L7PQ6IED9 249 aa13.59□□□□□ -0.23
KHDC3L-201ENST00000370367 CLRN3Q8NCR9 226 aa13.59□□□□□ -0.23
KHDC3L-201ENST00000370367 APCSP02743 223 aa13.58□□□□□ -0.24
KHDC3L-201ENST00000370367 LINC01620Q4KN68 170 aa13.58□□□□□ -0.24
KHDC3L-201ENST00000370367 NAT8Q9UHE5 227 aa13.58□□□□□ -0.24
KHDC3L-201ENST00000370367 RPL23P62829 140 aaKnown RBP13.57□□□□□ -0.24
KHDC3L-201ENST00000370367 MRAP2Q96G30 205 aa13.57□□□□□ -0.24
KHDC3L-201ENST00000370367 IGLV10-54A0A075B6I4 117 aa13.56□□□□□ -0.24
KHDC3L-201ENST00000370367 I3L3M4 83 aa13.56□□□□□ -0.24
KHDC3L-201ENST00000370367 PRSS1P07477 247 aa13.56□□□□□ -0.24
KHDC3L-201ENST00000370367 RIGQ13278 110 aa13.56□□□□□ -0.24
KHDC3L-201ENST00000370367 DEFB104AQ8WTQ1 72 aa13.56□□□□□ -0.24
KHDC3L-201ENST00000370367 CHAC1Q9BUX1 264 aa13.56□□□□□ -0.24
KHDC3L-201ENST00000370367 C9JQL5 133 aa13.55□□□□□ -0.24
KHDC3L-201ENST00000370367 SCXQ7RTU7 201 aa13.55□□□□□ -0.24
KHDC3L-201ENST00000370367 NUP35Q8NFH5 326 aa13.55□□□□□ -0.24
KHDC3L-201ENST00000370367 RNF185Q96GF1 192 aa13.55□□□□□ -0.24
KHDC3L-201ENST00000370367 ST20Q9HBF5 79 aa13.55□□□□□ -0.24
KHDC3L-201ENST00000370367 NAT8BQ9UHF3 227 aa13.55□□□□□ -0.24
KHDC3L-201ENST00000370367 ZNF25P17030 456 aaPredicted RBP13.54□□□□□ -0.24
KHDC3L-201ENST00000370367 RAB4AP20338 218 aa13.54□□□□□ -0.24
KHDC3L-201ENST00000370367 PMCHP20382 165 aa13.54□□□□□ -0.24
KHDC3L-201ENST00000370367 ADIRFQ15847 76 aa13.54□□□□□ -0.24
KHDC3L-201ENST00000370367 AMMECR1LQ6DCA0 310 aa13.54□□□□□ -0.24
KHDC3L-201ENST00000370367 SRRM2Q9UQ35 2752 aaKnown RBP13.53□□□□□ -0.24
KHDC3L-201ENST00000370367 PLA2G1BP04054 148 aaKnown RBP13.53□□□□□ -0.24
KHDC3L-201ENST00000370367 C9orf163Q8N9P6 203 aa13.53□□□□□ -0.24
KHDC3L-201ENST00000370367 TRBV27A0A0K0K1C4 114 aa13.52□□□□□ -0.25
KHDC3L-201ENST00000370367 PPP1R17O96001 155 aa13.52□□□□□ -0.25
KHDC3L-201ENST00000370367 FGF6P10767 208 aa13.52□□□□□ -0.25
KHDC3L-201ENST00000370367 CNBPP62633 177 aaKnown RBP13.52□□□□□ -0.25
KHDC3L-201ENST00000370367 SRSF3P84103 164 aaKnown RBP13.52□□□□□ -0.25
KHDC3L-201ENST00000370367 AMN1Q8IY45 258 aa13.52□□□□□ -0.25
KHDC3L-201ENST00000370367 LINC00528Q8N1L1 170 aa13.52□□□□□ -0.25
KHDC3L-201ENST00000370367 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.51□□□□□ -0.25
KHDC3L-201ENST00000370367 SMIM27A0A1W2PRY6 76 aa13.51□□□□□ -0.25
KHDC3L-201ENST00000370367 IGKV2-29A2NJV5 120 aaPredicted RBP13.51□□□□□ -0.25
KHDC3L-201ENST00000370367 ESDP10768 282 aa13.51□□□□□ -0.25
KHDC3L-201ENST00000370367 POLR2KP53803 58 aaKnown RBP13.51□□□□□ -0.25
KHDC3L-201ENST00000370367 MYCBP2O75592 4640 aa13.51□□□□□ -0.25
KHDC3L-201ENST00000370367 A0A1B0GW15 77 aa13.5□□□□□ -0.25
KHDC3L-201ENST00000370367 GAS8-AS1O95177 125 aa13.5□□□□□ -0.25
KHDC3L-201ENST00000370367 TSHBP01222 138 aa13.5□□□□□ -0.25
KHDC3L-201ENST00000370367 RNASEKQ6P5S7 137 aaKnown RBP13.5□□□□□ -0.25
KHDC3L-201ENST00000370367 RPS10P46783 165 aaKnown RBP13.49□□□□□ -0.25
KHDC3L-201ENST00000370367 CIRBP-AS1Q8TBR5 109 aa13.49□□□□□ -0.25
KHDC3L-201ENST00000370367 BTF3L4Q96K17 158 aa13.49□□□□□ -0.25
KHDC3L-201ENST00000370367 CFAP161Q6P656 301 aa13.48□□□□□ -0.25
KHDC3L-201ENST00000370367 TMEM101Q96IK0 257 aa13.48□□□□□ -0.25
KHDC3L-201ENST00000370367 AP5S1Q9NUS5 200 aa13.48□□□□□ -0.25
KHDC3L-201ENST00000370367 TMEM242Q9NWH2 141 aa13.48□□□□□ -0.25
KHDC3L-201ENST00000370367 hDV102S1A0JD36 115 aa13.47□□□□□ -0.25
KHDC3L-201ENST00000370367 MRPL52Q86TS9 123 aaKnown RBP13.47□□□□□ -0.25
KHDC3L-201ENST00000370367 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.46□□□□□ -0.25
KHDC3L-201ENST00000370367 GAGE12HA6NDE8 117 aa13.46□□□□□ -0.25
KHDC3L-201ENST00000370367 VCYO14598 125 aa13.46□□□□□ -0.25
KHDC3L-201ENST00000370367 FAM104BQ5XKR9 115 aa13.46□□□□□ -0.25
KHDC3L-201ENST00000370367 OR5A1Q8NGJ0 315 aa13.46□□□□□ -0.25
KHDC3L-201ENST00000370367 IGKV3OR2-268A0A0C4DH90 116 aa13.45□□□□□ -0.26
KHDC3L-201ENST00000370367 C7orf77A4D0Y5 90 aa13.45□□□□□ -0.26
KHDC3L-201ENST00000370367 LINC00862A6NCI5 91 aa13.45□□□□□ -0.26
KHDC3L-201ENST00000370367 PPP1R2P9O14990 202 aa13.45□□□□□ -0.26
KHDC3L-201ENST00000370367 SUMO2P61956 95 aaKnown RBP13.45□□□□□ -0.26
KHDC3L-201ENST00000370367 NRACQ8N912 160 aa13.45□□□□□ -0.26
KHDC3L-201ENST00000370367 CHCHD10Q8WYQ3 142 aaPredicted RBP13.45□□□□□ -0.26
KHDC3L-201ENST00000370367 DMBT1Q9UGM3 2413 aaPredicted RBP13.45□□□□□ -0.26
KHDC3L-201ENST00000370367 HERC1Q15751 4861 aa13.45□□□□□ -0.26
KHDC3L-201ENST00000370367 FLG2Q5D862 2391 aaPredicted RBP13.45□□□□□ -0.26
KHDC3L-201ENST00000370367 S100A8P05109 93 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms