RNA–Protein interactions for RNA: ENST00000370126.1

RTCA-202, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-202ENST00000370126 A0A1B0GUV1 79 aa13.96□□□□□ -0.17
RTCA-202ENST00000370126 J3QL48 77 aa13.96□□□□□ -0.17
RTCA-202ENST00000370126 TWIST1Q15672 202 aa13.96□□□□□ -0.17
RTCA-202ENST00000370126 DGAT2L7PQ6IED9 249 aa13.96□□□□□ -0.17
RTCA-202ENST00000370126 OCC1Q8TAD7 63 aa13.96□□□□□ -0.17
RTCA-202ENST00000370126 FAT3Q8TDW7 4589 aa13.95□□□□□ -0.18
RTCA-202ENST00000370126 IGLV10-54A0A075B6I4 117 aa13.95□□□□□ -0.18
RTCA-202ENST00000370126 LYPD6BQ8NI32 183 aa13.95□□□□□ -0.18
RTCA-202ENST00000370126 IGLV4-60A0A075B6I1 120 aa13.94□□□□□ -0.18
RTCA-202ENST00000370126 C9orf163Q8N9P6 203 aa13.94□□□□□ -0.18
RTCA-202ENST00000370126 GFRA4Q9GZZ7 299 aa13.94□□□□□ -0.18
RTCA-202ENST00000370126 TRAV8-4A0A0B4J246 113 aa13.93□□□□□ -0.18
RTCA-202ENST00000370126 KRTAP29-1A8MX34 341 aaPredicted RBP13.93□□□□□ -0.18
RTCA-202ENST00000370126 TMEM250H0YL14 139 aa13.93□□□□□ -0.18
RTCA-202ENST00000370126 AMTP48728 403 aa13.92□□□□□ -0.18
RTCA-202ENST00000370126 COTL1Q14019 142 aa13.92□□□□□ -0.18
RTCA-202ENST00000370126 GATD1Q8NB37 220 aa13.92□□□□□ -0.18
RTCA-202ENST00000370126 CLRN3Q8NCR9 226 aa13.92□□□□□ -0.18
RTCA-202ENST00000370126 GTSF1Q8WW33 167 aa13.92□□□□□ -0.18
RTCA-202ENST00000370126 TRAV26-2A0A0B4J265 109 aa13.91□□□□□ -0.18
RTCA-202ENST00000370126 UBE2L6O14933 153 aa13.91□□□□□ -0.18
RTCA-202ENST00000370126 NDUFS6O75380 124 aaKnown RBP13.91□□□□□ -0.18
RTCA-202ENST00000370126 EIF5A2Q9GZV4 153 aaKnown RBP13.91□□□□□ -0.18
RTCA-202ENST00000370126 CNBPP62633 177 aaKnown RBP13.88□□□□□ -0.19
RTCA-202ENST00000370126 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.88□□□□□ -0.19
RTCA-202ENST00000370126 hDV102S1A0JD36 115 aa13.87□□□□□ -0.19
RTCA-202ENST00000370126 GATCO43716 136 aaKnown RBP13.87□□□□□ -0.19
RTCA-202ENST00000370126 FOXA3P55318 350 aaPredicted RBP13.87□□□□□ -0.19
RTCA-202ENST00000370126 SDIM1Q6ZPB5 146 aa13.87□□□□□ -0.19
RTCA-202ENST00000370126 FAM231DQ6ZW35 169 aa13.87□□□□□ -0.19
RTCA-202ENST00000370126 SMIM15Q7Z3B0 74 aa13.87□□□□□ -0.19
RTCA-202ENST00000370126 RPL39LQ96EH5 51 aaKnown RBP13.87□□□□□ -0.19
RTCA-202ENST00000370126 FAM210AQ96ND0 272 aa13.87□□□□□ -0.19
RTCA-202ENST00000370126 PANO1I0J062 215 aa13.86□□□□□ -0.19
RTCA-202ENST00000370126 TEX261Q6UWH6 196 aa13.86□□□□□ -0.19
RTCA-202ENST00000370126 CEBPGP53567 150 aa13.85□□□□□ -0.19
RTCA-202ENST00000370126 A8MWL6 223 aa13.84□□□□□ -0.19
RTCA-202ENST00000370126 NCR2O95944 276 aa13.84□□□□□ -0.19
RTCA-202ENST00000370126 RPL37AP61513 92 aaKnown RBP13.84□□□□□ -0.19
RTCA-202ENST00000370126 CT83Q5H943 113 aa13.83□□□□□ -0.2
RTCA-202ENST00000370126 AP5S1Q9NUS5 200 aa13.83□□□□□ -0.2
RTCA-202ENST00000370126 SLPIP03973 132 aa13.82□□□□□ -0.2
RTCA-202ENST00000370126 GAGE12HA6NDE8 117 aa13.81□□□□□ -0.2
RTCA-202ENST00000370126 SDHAF1A6NFY7 115 aa13.81□□□□□ -0.2
RTCA-202ENST00000370126 APCSP02743 223 aa13.81□□□□□ -0.2
RTCA-202ENST00000370126 CIRBPQ14011 172 aaKnown RBP13.81□□□□□ -0.2
RTCA-202ENST00000370126 SMIM7Q9BQ49 75 aa13.81□□□□□ -0.2
RTCA-202ENST00000370126 HMCN2Q8NDA2 5059 aa13.81□□□□□ -0.2
RTCA-202ENST00000370126 IGHV3-64A0A075B6Q5 118 aa13.8□□□□□ -0.2
RTCA-202ENST00000370126 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.8□□□□□ -0.2
RTCA-202ENST00000370126 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.8□□□□□ -0.2
RTCA-202ENST00000370126 IGKV3OR2-268A0A0C4DH90 116 aa13.8□□□□□ -0.2
RTCA-202ENST00000370126 IGKV2-29A2NJV5 120 aaPredicted RBP13.8□□□□□ -0.2
RTCA-202ENST00000370126 H7C423 109 aa13.8□□□□□ -0.2
RTCA-202ENST00000370126 OXTP01178 125 aa13.8□□□□□ -0.2
RTCA-202ENST00000370126 AMMECR1LQ6DCA0 310 aa13.8□□□□□ -0.2
RTCA-202ENST00000370126 C15orf56Q8N910 161 aa13.8□□□□□ -0.2
RTCA-202ENST00000370126 SMDT1Q9H4I9 107 aa13.8□□□□□ -0.2
RTCA-202ENST00000370126 ZNF727A8MUV8 499 aa13.79□□□□□ -0.2
RTCA-202ENST00000370126 PEA15Q15121 130 aa13.79□□□□□ -0.2
RTCA-202ENST00000370126 FAM74A3Q4VXF1 159 aa13.79□□□□□ -0.2
RTCA-202ENST00000370126 TRBV6-5A0A0K0K1A5 114 aa13.78□□□□□ -0.2
RTCA-202ENST00000370126 FGF6P10767 208 aa13.78□□□□□ -0.2
RTCA-202ENST00000370126 RNASEKQ6P5S7 137 aaKnown RBP13.78□□□□□ -0.2
RTCA-202ENST00000370126 LINC01551Q86U37 167 aa13.78□□□□□ -0.2
RTCA-202ENST00000370126 BORCS7Q96B45 105 aa13.78□□□□□ -0.2
RTCA-202ENST00000370126 I3L3M4 83 aa13.77□□□□□ -0.21
RTCA-202ENST00000370126 HNRNPA3P51991 378 aaKnown RBP13.77□□□□□ -0.21
RTCA-202ENST00000370126 CFAP161Q6P656 301 aa13.77□□□□□ -0.21
RTCA-202ENST00000370126 CHCHD10Q8WYQ3 142 aaPredicted RBP13.77□□□□□ -0.21
RTCA-202ENST00000370126 FAM231BA6NCW3 169 aa13.76□□□□□ -0.21
RTCA-202ENST00000370126 GAS8-AS1O95177 125 aa13.76□□□□□ -0.21
RTCA-202ENST00000370126 SRP19P09132 144 aaKnown RBP13.76□□□□□ -0.21
RTCA-202ENST00000370126 RAB14P61106 215 aa13.76□□□□□ -0.21
RTCA-202ENST00000370126 TSKUQ8WUA8 353 aa13.76□□□□□ -0.21
RTCA-202ENST00000370126 A0A1B0GUT8 65 aa13.75□□□□□ -0.21
RTCA-202ENST00000370126 HIGD1CA8MV81 97 aa13.75□□□□□ -0.21
RTCA-202ENST00000370126 CHTF8P0CG12 524 aa13.75□□□□□ -0.21
RTCA-202ENST00000370126 ZNF25P17030 456 aaPredicted RBP13.75□□□□□ -0.21
RTCA-202ENST00000370126 PMCHP20382 165 aa13.75□□□□□ -0.21
RTCA-202ENST00000370126 TMEM191AQ9H0A3 160 aa13.75□□□□□ -0.21
RTCA-202ENST00000370126 SPACA4Q8TDM5 124 aa13.74□□□□□ -0.21
RTCA-202ENST00000370126 RNF185Q96GF1 192 aa13.74□□□□□ -0.21
RTCA-202ENST00000370126 ST20Q9HBF5 79 aa13.74□□□□□ -0.21
RTCA-202ENST00000370126 OSTCQ9NRP0 149 aa13.74□□□□□ -0.21
RTCA-202ENST00000370126 TSHBP01222 138 aa13.73□□□□□ -0.21
RTCA-202ENST00000370126 ESDP10768 282 aa13.73□□□□□ -0.21
RTCA-202ENST00000370126 TMEM241Q24JQ0 296 aa13.73□□□□□ -0.21
RTCA-202ENST00000370126 HIGD2BQ4VC39 106 aa13.73□□□□□ -0.21
RTCA-202ENST00000370126 TMEM242Q9NWH2 141 aa13.73□□□□□ -0.21
RTCA-202ENST00000370126 A0A087WYN8 130 aa13.72□□□□□ -0.21
RTCA-202ENST00000370126 OR5A1Q8NGJ0 315 aa13.72□□□□□ -0.21
RTCA-202ENST00000370126 GVQW2A0A096LPI5 108 aaPredicted RBP13.71□□□□□ -0.21
RTCA-202ENST00000370126 RAB4AP20338 218 aa13.71□□□□□ -0.21
RTCA-202ENST00000370126 RPS10P46783 165 aaKnown RBP13.71□□□□□ -0.21
RTCA-202ENST00000370126 FOXI1Q12951 378 aa13.71□□□□□ -0.21
RTCA-202ENST00000370126 BTF3L4Q96K17 158 aa13.71□□□□□ -0.21
RTCA-202ENST00000370126 POLR2KP53803 58 aaKnown RBP13.7□□□□□ -0.22
RTCA-202ENST00000370126 AMN1Q8IY45 258 aa13.7□□□□□ -0.22
RTCA-202ENST00000370126 DPH3Q96FX2 82 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms