RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 SLURP1P55000 103 aa7.43□□□□□ -1.22
PRPF38B-203ENST00000370025 C11orf21Q9P2W6 132 aa7.43□□□□□ -1.22
PRPF38B-203ENST00000370025 PEMTQ9UBM1 199 aa7.43□□□□□ -1.22
PRPF38B-203ENST00000370025 IGHV3OR16-12A0A075B7B8 117 aa7.43□□□□□ -1.22
PRPF38B-203ENST00000370025 IGKV3D-20A0A0C4DH25 116 aa7.43□□□□□ -1.22
PRPF38B-203ENST00000370025 RNASE1P07998 156 aaKnown RBP7.43□□□□□ -1.22
PRPF38B-203ENST00000370025 LYRM7Q5U5X0 104 aa7.43□□□□□ -1.22
PRPF38B-203ENST00000370025 RASL10AQ92737 203 aa7.43□□□□□ -1.22
PRPF38B-203ENST00000370025 DUX3Q96PT4 197 aa7.43□□□□□ -1.22
PRPF38B-203ENST00000370025 ADARB2-AS1A8MUL3 147 aa7.43□□□□□ -1.22
PRPF38B-203ENST00000370025 C11orf44Q8N8P7 122 aa7.43□□□□□ -1.22
PRPF38B-203ENST00000370025 TRAV21A0A0B4J279 112 aa7.42□□□□□ -1.22
PRPF38B-203ENST00000370025 PRSS2P07478 247 aa7.42□□□□□ -1.22
PRPF38B-203ENST00000370025 UBE2D3P61077 147 aa7.42□□□□□ -1.22
PRPF38B-203ENST00000370025 UBE2D2P62837 147 aa7.42□□□□□ -1.22
PRPF38B-203ENST00000370025 C2orf66Q6UXQ4 117 aa7.42□□□□□ -1.22
PRPF38B-203ENST00000370025 CD7P09564 240 aa7.42□□□□□ -1.22
PRPF38B-203ENST00000370025 ZFAND2AQ8N6M9 145 aa7.42□□□□□ -1.22
PRPF38B-203ENST00000370025 IGLV2-18A0A075B6J9 118 aa7.42□□□□□ -1.22
PRPF38B-203ENST00000370025 A4D1N5 150 aa7.42□□□□□ -1.22
PRPF38B-203ENST00000370025 K7EQG2 157 aa7.42□□□□□ -1.22
PRPF38B-203ENST00000370025 UBE2D1P51668 147 aa7.42□□□□□ -1.22
PRPF38B-203ENST00000370025 HERVK_113P61574 105 aa7.42□□□□□ -1.22
PRPF38B-203ENST00000370025 PSMG4Q5JS54 123 aa7.42□□□□□ -1.22
PRPF38B-203ENST00000370025 PRO1854Q9UHT4 67 aa7.42□□□□□ -1.22
PRPF38B-203ENST00000370025 TRAV12-2A0A075B6T6 113 aa7.41□□□□□ -1.22
PRPF38B-203ENST00000370025 A0A0U1RRA0 63 aa7.41□□□□□ -1.22
PRPF38B-203ENST00000370025 DUSP14O95147 198 aaKnown RBP7.41□□□□□ -1.22
PRPF38B-203ENST00000370025 ZNF575Q86XF7 245 aa7.41□□□□□ -1.22
PRPF38B-203ENST00000370025 C10orf126Q8N4M7 172 aa7.41□□□□□ -1.22
PRPF38B-203ENST00000370025 BAALCQ8WXS3 180 aa7.41□□□□□ -1.22
PRPF38B-203ENST00000370025 KLK5Q9Y337 293 aaPredicted RBP7.41□□□□□ -1.22
PRPF38B-203ENST00000370025 GCN1Q92616 2671 aaKnown RBP7.41□□□□□ -1.22
PRPF38B-203ENST00000370025 FASNP49327 2511 aaKnown RBP7.41□□□□□ -1.22
PRPF38B-203ENST00000370025 C11orf86A6NJI1 115 aa7.41□□□□□ -1.22
PRPF38B-203ENST00000370025 NRACQ8N912 160 aa7.41□□□□□ -1.22
PRPF38B-203ENST00000370025 PRR9Q5T870 116 aa7.41□□□□□ -1.22
PRPF38B-203ENST00000370025 FAM19A4Q96LR4 140 aa7.41□□□□□ -1.22
PRPF38B-203ENST00000370025 C16orf95Q9H693 158 aa7.41□□□□□ -1.22
PRPF38B-203ENST00000370025 TRAV12-3A0A0B4J271 114 aa7.4□□□□□ -1.22
PRPF38B-203ENST00000370025 GNRH2O43555 120 aa7.4□□□□□ -1.22
PRPF38B-203ENST00000370025 HILS1P60008 231 aa7.4□□□□□ -1.22
PRPF38B-203ENST00000370025 RPL39P62891 51 aaKnown RBP7.4□□□□□ -1.22
PRPF38B-203ENST00000370025 CNFNQ9BYD5 112 aa7.4□□□□□ -1.22
PRPF38B-203ENST00000370025 TNFRSF18Q9Y5U5 241 aa7.4□□□□□ -1.22
PRPF38B-203ENST00000370025 ZNF469Q96JG9 3925 aaPredicted RBP7.4□□□□□ -1.22
PRPF38B-203ENST00000370025 TSPEAR-AS2P59090 65 aa7.4□□□□□ -1.22
PRPF38B-203ENST00000370025 SMR3AQ99954 134 aa7.4□□□□□ -1.22
PRPF38B-203ENST00000370025 SMIM2Q9BVW6 85 aa7.4□□□□□ -1.22
PRPF38B-203ENST00000370025 A0A0J9YY99 117 aa7.4□□□□□ -1.23
PRPF38B-203ENST00000370025 LINC01006Q8NI28 216 aa7.4□□□□□ -1.23
PRPF38B-203ENST00000370025 VCX2Q9H322 139 aa7.4□□□□□ -1.23
PRPF38B-203ENST00000370025 RS1O15537 224 aa7.39□□□□□ -1.23
PRPF38B-203ENST00000370025 LY6G6DO95868 133 aa7.39□□□□□ -1.23
PRPF38B-203ENST00000370025 APRG1Q8IVJ8 170 aa7.39□□□□□ -1.23
PRPF38B-203ENST00000370025 DYNLRB2Q8TF09 96 aa7.39□□□□□ -1.23
PRPF38B-203ENST00000370025 LINC00694P0DN24 101 aa7.39□□□□□ -1.23
PRPF38B-203ENST00000370025 JPT2Q9H910 190 aa7.39□□□□□ -1.23
PRPF38B-203ENST00000370025 A0A0J9YX75 114 aa7.39□□□□□ -1.23
PRPF38B-203ENST00000370025 CD28P10747 220 aa7.39□□□□□ -1.23
PRPF38B-203ENST00000370025 SUMO2P61956 95 aaKnown RBP7.39□□□□□ -1.23
PRPF38B-203ENST00000370025 RNASE13Q5GAN3 156 aaKnown RBP7.39□□□□□ -1.23
PRPF38B-203ENST00000370025 ODF3Q96PU9 254 aa7.39□□□□□ -1.23
PRPF38B-203ENST00000370025 OPRPNQ99935 248 aaPredicted RBP7.39□□□□□ -1.23
PRPF38B-203ENST00000370025 HECTD1Q9ULT8 2610 aa7.39□□□□□ -1.23
PRPF38B-203ENST00000370025 A0A1W2PRX2 142 aa7.38□□□□□ -1.23
PRPF38B-203ENST00000370025 C2orf82Q6UX34 121 aa7.38□□□□□ -1.23
PRPF38B-203ENST00000370025 NEXN-AS1Q8NBZ9 246 aa7.38□□□□□ -1.23
PRPF38B-203ENST00000370025 KNCNA6PVL3 124 aa7.38□□□□□ -1.23
PRPF38B-203ENST00000370025 ASIPP42127 132 aa7.38□□□□□ -1.23
PRPF38B-203ENST00000370025 FAM236AA0A1B0GUQ0 79 aa7.38□□□□□ -1.23
PRPF38B-203ENST00000370025 FAM236BA0A1B0GV22 79 aa7.38□□□□□ -1.23
PRPF38B-203ENST00000370025 KLLNB2CW77 178 aa7.38□□□□□ -1.23
PRPF38B-203ENST00000370025 LGALS3P17931 250 aaKnown RBP7.38□□□□□ -1.23
PRPF38B-203ENST00000370025 CCL24O00175 119 aa7.37□□□□□ -1.23
PRPF38B-203ENST00000370025 ZNF22P17026 224 aaPredicted RBP7.37□□□□□ -1.23
PRPF38B-203ENST00000370025 TP53TG1Q9Y2A0 90 aa7.37□□□□□ -1.23
PRPF38B-203ENST00000370025 IGHV3-30P01768 117 aa7.37□□□□□ -1.23
PRPF38B-203ENST00000370025 IGHV3-30-5P0DP03 117 aa7.37□□□□□ -1.23
PRPF38B-203ENST00000370025 CEMP1Q6PRD7 247 aaPredicted RBP7.37□□□□□ -1.23
PRPF38B-203ENST00000370025 CLEC2BQ92478 149 aa7.37□□□□□ -1.23
PRPF38B-203ENST00000370025 CITED2Q99967 270 aaPredicted RBP7.37□□□□□ -1.23
PRPF38B-203ENST00000370025 H3BMM0 161 aa7.37□□□□□ -1.23
PRPF38B-203ENST00000370025 LINC01620Q4KN68 170 aa7.37□□□□□ -1.23
PRPF38B-203ENST00000370025 MUSTN1Q8IVN3 82 aa7.37□□□□□ -1.23
PRPF38B-203ENST00000370025 UBE2WQ96B02 151 aa7.37□□□□□ -1.23
PRPF38B-203ENST00000370025 TRGV11A0A075B6L2 103 aa7.36□□□□□ -1.23
PRPF38B-203ENST00000370025 NDUFA7O95182 113 aa7.36□□□□□ -1.23
PRPF38B-203ENST00000370025 IGHV4-4A0A075B6R2 117 aa7.36□□□□□ -1.23
PRPF38B-203ENST00000370025 IGKV3OR2-268A0A0C4DH90 116 aa7.36□□□□□ -1.23
PRPF38B-203ENST00000370025 ORMDL2Q53FV1 153 aa7.36□□□□□ -1.23
PRPF38B-203ENST00000370025 C9orf153Q5TBE3 101 aa7.36□□□□□ -1.23
PRPF38B-203ENST00000370025 TMEM61Q8N0U2 210 aa7.36□□□□□ -1.23
PRPF38B-203ENST00000370025 MED14OSP0DP75 135 aa7.36□□□□□ -1.23
PRPF38B-203ENST00000370025 DEFB114Q30KQ6 69 aa7.36□□□□□ -1.23
PRPF38B-203ENST00000370025 TRAV8-3A0A0A6YYJ7 113 aa7.35□□□□□ -1.23
PRPF38B-203ENST00000370025 DEFB131AP59861 70 aa7.35□□□□□ -1.23
PRPF38B-203ENST00000370025 PMVKQ15126 192 aa7.35□□□□□ -1.23
PRPF38B-203ENST00000370025 TOMM6Q96B49 74 aa7.34□□□□□ -1.23
PRPF38B-203ENST00000370025 TRAV12-1A0A0B4J245 112 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms