RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 MRPL16Q9NX20 251 aaKnown RBP12.42□□□□□ -0.42
UBE3D-203ENST00000369747 P0DMU3 169 aa12.41□□□□□ -0.42
UBE3D-203ENST00000369747 FAM231AP0DMU4 169 aa12.41□□□□□ -0.42
UBE3D-203ENST00000369747 FAM231CP0DMU5 169 aa12.41□□□□□ -0.42
UBE3D-203ENST00000369747 LINC00469Q8N7U9 141 aa12.41□□□□□ -0.42
UBE3D-203ENST00000369747 PRSS29PA6NIE9 313 aa12.41□□□□□ -0.42
UBE3D-203ENST00000369747 RHOHQ15669 191 aa12.41□□□□□ -0.42
UBE3D-203ENST00000369747 IL17DQ8TAD2 202 aa12.41□□□□□ -0.42
UBE3D-203ENST00000369747 I3L3M4 83 aa12.4□□□□□ -0.42
UBE3D-203ENST00000369747 SIVA1O15304 175 aa12.4□□□□□ -0.42
UBE3D-203ENST00000369747 DEFB135Q30KP9 77 aa12.4□□□□□ -0.42
UBE3D-203ENST00000369747 Q6ZSN1 163 aa12.4□□□□□ -0.42
UBE3D-203ENST00000369747 TIMM17AQ99595 171 aa12.4□□□□□ -0.42
UBE3D-203ENST00000369747 TTTY13Q9BZ97 58 aa12.4□□□□□ -0.42
UBE3D-203ENST00000369747 DEFB121Q5J5C9 76 aa12.39□□□□□ -0.43
UBE3D-203ENST00000369747 TMEM141Q96I45 108 aa12.39□□□□□ -0.43
UBE3D-203ENST00000369747 ZNF25P17030 456 aaPredicted RBP12.39□□□□□ -0.43
UBE3D-203ENST00000369747 RNASE8Q8TDE3 154 aaKnown RBP12.39□□□□□ -0.43
UBE3D-203ENST00000369747 RS1O15537 224 aa12.38□□□□□ -0.43
UBE3D-203ENST00000369747 Q9UF83 564 aa12.38□□□□□ -0.43
UBE3D-203ENST00000369747 TENM3Q9P273 2699 aa12.38□□□□□ -0.43
UBE3D-203ENST00000369747 RHODO00212 210 aa12.37□□□□□ -0.43
UBE3D-203ENST00000369747 TMEM97Q5BJF2 176 aa12.37□□□□□ -0.43
UBE3D-203ENST00000369747 Q6ZVH6 145 aa12.37□□□□□ -0.43
UBE3D-203ENST00000369747 C20orf203Q8NBC4 194 aa12.37□□□□□ -0.43
UBE3D-203ENST00000369747 PMVKQ15126 192 aa12.36□□□□□ -0.43
UBE3D-203ENST00000369747 IGLV4-69A0A075B6H9 119 aa12.35□□□□□ -0.43
UBE3D-203ENST00000369747 IGHV3-53P01767 116 aa12.35□□□□□ -0.43
UBE3D-203ENST00000369747 TMEM263Q8WUH6 116 aaKnown RBP12.35□□□□□ -0.43
UBE3D-203ENST00000369747 CST9LQ9H4G1 147 aa12.35□□□□□ -0.43
UBE3D-203ENST00000369747 TNFRSF18Q9Y5U5 241 aa12.35□□□□□ -0.43
UBE3D-203ENST00000369747 COL7A1Q02388 2944 aa12.35□□□□□ -0.43
UBE3D-203ENST00000369747 MRAPQ8TCY5 172 aa12.35□□□□□ -0.43
UBE3D-203ENST00000369747 HSD52Q0P140 79 aa12.34□□□□□ -0.43
UBE3D-203ENST00000369747 SBSPONQ8IVN8 264 aa12.34□□□□□ -0.43
UBE3D-203ENST00000369747 MAPKAPK5-AS1Q8N8E1 139 aa12.34□□□□□ -0.43
UBE3D-203ENST00000369747 COX11Q9Y6N1 276 aa12.34□□□□□ -0.43
UBE3D-203ENST00000369747 TRGV1A0A0A0MS02 117 aa12.33□□□□□ -0.44
UBE3D-203ENST00000369747 RETNQ9HD89 108 aa12.33□□□□□ -0.44
UBE3D-203ENST00000369747 HIGD1BQ9P298 99 aa12.33□□□□□ -0.44
UBE3D-203ENST00000369747 X6R8D5 127 aa12.33□□□□□ -0.44
UBE3D-203ENST00000369747 TRBV25-1A0A075B6N4 114 aa12.33□□□□□ -0.44
UBE3D-203ENST00000369747 TRAV8-6A0A0B4J262 113 aa12.33□□□□□ -0.44
UBE3D-203ENST00000369747 C11orf86A6NJI1 115 aa12.33□□□□□ -0.44
UBE3D-203ENST00000369747 RNF183Q96D59 192 aa12.33□□□□□ -0.44
UBE3D-203ENST00000369747 OPRPNQ99935 248 aaPredicted RBP12.33□□□□□ -0.44
UBE3D-203ENST00000369747 TAX1BP3O14907 124 aa12.32□□□□□ -0.44
UBE3D-203ENST00000369747 OR11H2Q8NH07 326 aa12.32□□□□□ -0.44
UBE3D-203ENST00000369747 PRKDCP78527 4128 aaKnown RBP12.32□□□□□ -0.44
UBE3D-203ENST00000369747 EMP1P54849 157 aa12.31□□□□□ -0.44
UBE3D-203ENST00000369747 SEC11AP67812 179 aa12.31□□□□□ -0.44
UBE3D-203ENST00000369747 GAGE1Q13065 139 aa12.31□□□□□ -0.44
UBE3D-203ENST00000369747 Q6ZTI0 123 aa12.31□□□□□ -0.44
UBE3D-203ENST00000369747 ORAOV1Q8WV07 137 aa12.31□□□□□ -0.44
UBE3D-203ENST00000369747 DNAJC30Q96LL9 226 aa12.31□□□□□ -0.44
UBE3D-203ENST00000369747 PLAC8L1A1L4L8 177 aa12.31□□□□□ -0.44
UBE3D-203ENST00000369747 RRN3P1Q2M238 152 aa12.31□□□□□ -0.44
UBE3D-203ENST00000369747 OR4C5Q8NGB2 326 aa12.31□□□□□ -0.44
UBE3D-203ENST00000369747 OVOL2Q9BRP0 275 aa12.31□□□□□ -0.44
UBE3D-203ENST00000369747 E9PLD3 99 aa12.3□□□□□ -0.44
UBE3D-203ENST00000369747 PAPPA-AS1Q5QFB9 102 aa12.3□□□□□ -0.44
UBE3D-203ENST00000369747 ZNF479Q96JC4 524 aa12.3□□□□□ -0.44
UBE3D-203ENST00000369747 CHAC1Q9BUX1 264 aa12.3□□□□□ -0.44
UBE3D-203ENST00000369747 DAZ2Q13117 558 aaKnown RBP12.29□□□□□ -0.44
UBE3D-203ENST00000369747 IGLV4-3A0A075B6K6 122 aa12.29□□□□□ -0.44
UBE3D-203ENST00000369747 ZNRF2Q8NHG8 242 aa12.29□□□□□ -0.44
UBE3D-203ENST00000369747 C16orf74Q96GX8 76 aa12.29□□□□□ -0.44
UBE3D-203ENST00000369747 CHCHD7Q9BUK0 85 aa12.29□□□□□ -0.44
UBE3D-203ENST00000369747 NOP10Q9NPE3 64 aaKnown RBP12.29□□□□□ -0.44
UBE3D-203ENST00000369747 DEFB4AO15263 64 aa12.28□□□□□ -0.44
UBE3D-203ENST00000369747 FAM104AQ969W3 186 aa12.28□□□□□ -0.44
UBE3D-203ENST00000369747 PRADC1Q9BSG0 188 aa12.28□□□□□ -0.44
UBE3D-203ENST00000369747 PYGO1Q9Y3Y4 419 aa12.28□□□□□ -0.44
UBE3D-203ENST00000369747 DNAH9Q9NYC9 4486 aa12.28□□□□□ -0.44
UBE3D-203ENST00000369747 TRAV4A0A0B4J268 109 aa12.27□□□□□ -0.44
UBE3D-203ENST00000369747 NPSP0C0P6 89 aa12.27□□□□□ -0.44
UBE3D-203ENST00000369747 HUWE1Q7Z6Z7 4374 aaKnown RBP12.27□□□□□ -0.45
UBE3D-203ENST00000369747 IGHV3-38A0A0C4DH36 116 aa12.27□□□□□ -0.45
UBE3D-203ENST00000369747 PHLDA1Q8WV24 401 aaPredicted RBP12.27□□□□□ -0.45
UBE3D-203ENST00000369747 MYMXA0A1B0GTQ4 84 aa12.26□□□□□ -0.45
UBE3D-203ENST00000369747 SMIM9A6NGZ8 99 aa12.26□□□□□ -0.45
UBE3D-203ENST00000369747 NFE4Q86UQ8 179 aa12.26□□□□□ -0.45
UBE3D-203ENST00000369747 Q8NAQ8 132 aa12.26□□□□□ -0.45
UBE3D-203ENST00000369747 IGHV4-28A0A0C4DH34 117 aa12.25□□□□□ -0.45
UBE3D-203ENST00000369747 TM2D3Q9BRN9 247 aa12.25□□□□□ -0.45
UBE3D-203ENST00000369747 A6NDN8 102 aa12.25□□□□□ -0.45
UBE3D-203ENST00000369747 K7EQD1 137 aa12.24□□□□□ -0.45
UBE3D-203ENST00000369747 COTL1Q14019 142 aa12.24□□□□□ -0.45
UBE3D-203ENST00000369747 CEMP1Q6PRD7 247 aaPredicted RBP12.24□□□□□ -0.45
UBE3D-203ENST00000369747 AMELXQ99217 191 aa12.24□□□□□ -0.45
UBE3D-203ENST00000369747 VCX2Q9H322 139 aa12.24□□□□□ -0.45
UBE3D-203ENST00000369747 MIFP14174 115 aa12.23□□□□□ -0.45
UBE3D-203ENST00000369747 HERVK_113P61574 105 aa12.23□□□□□ -0.45
UBE3D-203ENST00000369747 TMEM170BQ5T4T1 132 aa12.23□□□□□ -0.45
UBE3D-203ENST00000369747 UBE2D4Q9Y2X8 147 aa12.23□□□□□ -0.45
UBE3D-203ENST00000369747 FBN3Q75N90 2809 aa12.23□□□□□ -0.45
UBE3D-203ENST00000369747 TRBV7-3A0A075B6L6 115 aa12.23□□□□□ -0.45
UBE3D-203ENST00000369747 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.23□□□□□ -0.45
UBE3D-203ENST00000369747 TRBV10-1A0A0K0K1A3 114 aa12.23□□□□□ -0.45
UBE3D-203ENST00000369747 IGKV2-29A2NJV5 120 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms