RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 MALP21145 153 aa13.1□□□□□ -0.31
CHTOP-201ENST00000368686 Q8N2B8 174 aa13.1□□□□□ -0.31
CHTOP-201ENST00000368686 DSCR8Q96T75 97 aa13.1□□□□□ -0.31
CHTOP-201ENST00000368686 GPR179Q6PRD1 2367 aa13.1□□□□□ -0.31
CHTOP-201ENST00000368686 LY6HO94772 140 aa13.09□□□□□ -0.31
CHTOP-201ENST00000368686 TRBV12-3P01733 135 aa13.09□□□□□ -0.31
CHTOP-201ENST00000368686 PRIMA1Q86XR5 153 aa13.09□□□□□ -0.31
CHTOP-201ENST00000368686 TACC2O95359 2948 aa13.09□□□□□ -0.31
CHTOP-201ENST00000368686 C4orf26Q17RF5 130 aa13.09□□□□□ -0.31
CHTOP-201ENST00000368686 Q5XG85 94 aa13.09□□□□□ -0.31
CHTOP-201ENST00000368686 C5orf56Q8N8D9 126 aa13.09□□□□□ -0.31
CHTOP-201ENST00000368686 MRAPQ8TCY5 172 aa13.09□□□□□ -0.31
CHTOP-201ENST00000368686 RHPN1-AS1Q9BWJ2 59 aa13.09□□□□□ -0.31
CHTOP-201ENST00000368686 CSMD1Q96PZ7 3565 aa13.09□□□□□ -0.31
CHTOP-201ENST00000368686 CNOT1A5YKK6 2376 aaKnown RBP13.08□□□□□ -0.32
CHTOP-201ENST00000368686 C19orf54Q5BKX5 351 aa13.08□□□□□ -0.32
CHTOP-201ENST00000368686 FAM218AQ96MZ4 157 aa13.08□□□□□ -0.32
CHTOP-201ENST00000368686 SIRPDQ9H106 197 aa13.08□□□□□ -0.32
CHTOP-201ENST00000368686 UBE2D4Q9Y2X8 147 aa13.08□□□□□ -0.32
CHTOP-201ENST00000368686 IGLV5-45A0A087WSX0 123 aa13.08□□□□□ -0.32
CHTOP-201ENST00000368686 IGHV1OR15-1A0A075B7D0 117 aa13.07□□□□□ -0.32
CHTOP-201ENST00000368686 CDKN2A-AS1Q9UH64 79 aa13.07□□□□□ -0.32
CHTOP-201ENST00000368686 NACAE9PAV3 2078 aa13.07□□□□□ -0.32
CHTOP-201ENST00000368686 Q9H8V8 135 aa13.06□□□□□ -0.32
CHTOP-201ENST00000368686 HRCT1Q6UXD1 115 aa13.06□□□□□ -0.32
CHTOP-201ENST00000368686 OVOL2Q9BRP0 275 aa13.06□□□□□ -0.32
CHTOP-201ENST00000368686 ASPMQ8IZT6 3477 aa13.06□□□□□ -0.32
CHTOP-201ENST00000368686 SOSTDC1Q6X4U4 206 aa13.05□□□□□ -0.32
CHTOP-201ENST00000368686 IGKV3D-7A0A0C4DH55 119 aa13.05□□□□□ -0.32
CHTOP-201ENST00000368686 USP17L23D6RBM5 183 aa13.05□□□□□ -0.32
CHTOP-201ENST00000368686 IGHG2P01859 326 aa13.05□□□□□ -0.32
CHTOP-201ENST00000368686 SYNJ2BPP57105 145 aa13.05□□□□□ -0.32
CHTOP-201ENST00000368686 CHCHD7Q9BUK0 85 aa13.05□□□□□ -0.32
CHTOP-201ENST00000368686 PCNX1Q96RV3 2341 aa13.04□□□□□ -0.32
CHTOP-201ENST00000368686 SAA4P35542 130 aa13.04□□□□□ -0.32
CHTOP-201ENST00000368686 PRORYQ9H606 182 aa13.04□□□□□ -0.32
CHTOP-201ENST00000368686 IGLV5-39A0A0G2JS06 123 aa13.03□□□□□ -0.32
CHTOP-201ENST00000368686 HIST2H2BCQ6DN03 193 aa13.03□□□□□ -0.32
CHTOP-201ENST00000368686 HIST2H2BDQ6DRA6 164 aa13.03□□□□□ -0.32
CHTOP-201ENST00000368686 Q9HAA7 133 aa13.03□□□□□ -0.32
CHTOP-201ENST00000368686 TRAV12-2A0A075B6T6 113 aa13.02□□□□□ -0.32
CHTOP-201ENST00000368686 NDUFC2-KCTD14E9PQ53 114 aa13.02□□□□□ -0.32
CHTOP-201ENST00000368686 ZFP36P26651 326 aaKnown RBP13.02□□□□□ -0.32
CHTOP-201ENST00000368686 RNF152Q8N8N0 203 aa13.02□□□□□ -0.32
CHTOP-201ENST00000368686 PF4P02776 101 aa13.02□□□□□ -0.33
CHTOP-201ENST00000368686 LINC01561Q8N1V8 128 aa13.02□□□□□ -0.33
CHTOP-201ENST00000368686 USMG5Q96IX5 58 aa13.02□□□□□ -0.33
CHTOP-201ENST00000368686 RS1O15537 224 aa13.01□□□□□ -0.33
CHTOP-201ENST00000368686 RPL28P46779 137 aaKnown RBP13.01□□□□□ -0.33
CHTOP-201ENST00000368686 DEFB124Q8NES8 71 aa13.01□□□□□ -0.33
CHTOP-201ENST00000368686 A0A0U1RRA0 63 aa13.01□□□□□ -0.33
CHTOP-201ENST00000368686 MOB4Q9Y3A3 225 aa13.01□□□□□ -0.33
CHTOP-201ENST00000368686 NCOR1O75376 2440 aa13.01□□□□□ -0.33
CHTOP-201ENST00000368686 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13□□□□□ -0.33
CHTOP-201ENST00000368686 IGKV2-29A2NJV5 120 aaPredicted RBP13□□□□□ -0.33
CHTOP-201ENST00000368686 ZNF625Q96I27 306 aaPredicted RBP13□□□□□ -0.33
CHTOP-201ENST00000368686 LINC00846Q9NV44 126 aa13□□□□□ -0.33
CHTOP-201ENST00000368686 A0A087WVE0 104 aa13□□□□□ -0.33
CHTOP-201ENST00000368686 LINC01560Q8TB33 94 aa13□□□□□ -0.33
CHTOP-201ENST00000368686 OBSCN-AS1Q96MR7 158 aa13□□□□□ -0.33
CHTOP-201ENST00000368686 C14orf132Q9NPU4 83 aa13□□□□□ -0.33
CHTOP-201ENST00000368686 TRAV13-2A0A0B4J235 113 aa12.99□□□□□ -0.33
CHTOP-201ENST00000368686 K7ENP7 123 aa12.99□□□□□ -0.33
CHTOP-201ENST00000368686 NDUFC2O95298 119 aa12.99□□□□□ -0.33
CHTOP-201ENST00000368686 BOD1L1Q8NFC6 3051 aa12.99□□□□□ -0.33
CHTOP-201ENST00000368686 CACNA1BQ00975 2339 aa12.99□□□□□ -0.33
CHTOP-201ENST00000368686 LINC00467Q9BRT7 94 aa12.99□□□□□ -0.33
CHTOP-201ENST00000368686 H3BUA1 57 aa12.98□□□□□ -0.33
CHTOP-201ENST00000368686 IGHV3-11P01762 117 aa12.98□□□□□ -0.33
CHTOP-201ENST00000368686 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.98□□□□□ -0.33
CHTOP-201ENST00000368686 SPTBN2O15020 2390 aa12.98□□□□□ -0.33
CHTOP-201ENST00000368686 MED13LQ71F56 2210 aa12.98□□□□□ -0.33
CHTOP-201ENST00000368686 IGHV3-73A0A0B4J1V6 119 aa12.97□□□□□ -0.33
CHTOP-201ENST00000368686 ADGRG4Q8IZF6 3080 aa12.97□□□□□ -0.33
CHTOP-201ENST00000368686 IGKV3-20P01619 116 aa12.96□□□□□ -0.33
CHTOP-201ENST00000368686 PROK1P58294 105 aa12.96□□□□□ -0.33
CHTOP-201ENST00000368686 CRPP02741 224 aa12.96□□□□□ -0.34
CHTOP-201ENST00000368686 HOXD3P31249 432 aaPredicted RBP12.96□□□□□ -0.34
CHTOP-201ENST00000368686 UCNP55089 124 aa12.96□□□□□ -0.34
CHTOP-201ENST00000368686 SPINK13Q1W4C9 94 aa12.96□□□□□ -0.34
CHTOP-201ENST00000368686 APC2O95996 2303 aa12.95□□□□□ -0.34
CHTOP-201ENST00000368686 K7EMT4 169 aa12.95□□□□□ -0.34
CHTOP-201ENST00000368686 COX6A2Q02221 97 aa12.95□□□□□ -0.34
CHTOP-201ENST00000368686 FHL2Q14192 279 aa12.95□□□□□ -0.34
CHTOP-201ENST00000368686 SMIM1B2RUZ4 78 aa12.93□□□□□ -0.34
CHTOP-201ENST00000368686 SNRPD3P62318 126 aaKnown RBP12.93□□□□□ -0.34
CHTOP-201ENST00000368686 C9orf129Q5T035 196 aaKnown RBP12.93□□□□□ -0.34
CHTOP-201ENST00000368686 DGAT2L7PQ6IED9 249 aa12.93□□□□□ -0.34
CHTOP-201ENST00000368686 C10orf105Q8TEF2 133 aa12.93□□□□□ -0.34
CHTOP-201ENST00000368686 LINC00242Q5T6M2 205 aa12.92□□□□□ -0.34
CHTOP-201ENST00000368686 PIK3CD-AS1Q5SR53 167 aa12.92□□□□□ -0.34
CHTOP-201ENST00000368686 FAM19A3Q7Z5A8 133 aa12.92□□□□□ -0.34
CHTOP-201ENST00000368686 IGHV3OR16-12A0A075B7B8 117 aa12.91□□□□□ -0.34
CHTOP-201ENST00000368686 A0A087WYN8 130 aa12.91□□□□□ -0.34
CHTOP-201ENST00000368686 H0YGX0 51 aa12.91□□□□□ -0.34
CHTOP-201ENST00000368686 S100A7L2Q5SY68 101 aa12.91□□□□□ -0.34
CHTOP-201ENST00000368686 PIEZO2Q9H5I5 2752 aa12.91□□□□□ -0.34
CHTOP-201ENST00000368686 TTC28Q96AY4 2481 aa12.91□□□□□ -0.34
CHTOP-201ENST00000368686 EDN2P20800 178 aa12.91□□□□□ -0.34
CHTOP-201ENST00000368686 ATP5EP2Q5VTU8 51 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms