RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 LOC389332A0A1B0GUA5 103 aa10.27□□□□□ -0.76
SMPDL3A-201ENST00000368440 FABP4P15090 132 aa10.27□□□□□ -0.76
SMPDL3A-201ENST00000368440 COA6Q5JTJ3 125 aaKnown RBP10.27□□□□□ -0.76
SMPDL3A-201ENST00000368440 RNASEKQ6P5S7 137 aaKnown RBP10.27□□□□□ -0.76
SMPDL3A-201ENST00000368440 ORMDL3Q8N138 153 aa10.27□□□□□ -0.76
SMPDL3A-201ENST00000368440 SUMO4Q6EEV6 95 aa10.27□□□□□ -0.77
SMPDL3A-201ENST00000368440 DPH3P1Q9H4G8 78 aa10.27□□□□□ -0.77
SMPDL3A-201ENST00000368440 TRBV7-3A0A075B6L6 115 aa10.26□□□□□ -0.77
SMPDL3A-201ENST00000368440 UBE2D3P61077 147 aa10.26□□□□□ -0.77
SMPDL3A-201ENST00000368440 UBE2D2P62837 147 aa10.26□□□□□ -0.77
SMPDL3A-201ENST00000368440 RPL36AP83881 106 aaKnown RBP10.26□□□□□ -0.77
SMPDL3A-201ENST00000368440 RPL36ALQ969Q0 106 aaKnown RBP10.26□□□□□ -0.77
SMPDL3A-201ENST00000368440 NPYP01303 97 aa10.25□□□□□ -0.77
SMPDL3A-201ENST00000368440 TTC32Q5I0X7 151 aa10.25□□□□□ -0.77
SMPDL3A-201ENST00000368440 LELP1Q5T871 98 aa10.25□□□□□ -0.77
SMPDL3A-201ENST00000368440 C1orf134Q5TEV5 83 aa10.25□□□□□ -0.77
SMPDL3A-201ENST00000368440 M0QY20 66 aa10.25□□□□□ -0.77
SMPDL3A-201ENST00000368440 PMCHP20382 165 aa10.25□□□□□ -0.77
SMPDL3A-201ENST00000368440 NIT1Q86X76 327 aa10.25□□□□□ -0.77
SMPDL3A-201ENST00000368440 HIST1H2BLQ99880 126 aa10.25□□□□□ -0.77
SMPDL3A-201ENST00000368440 DNAH17Q9UFH2 4485 aa10.25□□□□□ -0.77
SMPDL3A-201ENST00000368440 IGHV3-38A0A0C4DH36 116 aa10.24□□□□□ -0.77
SMPDL3A-201ENST00000368440 DNAH10OSP0CZ25 163 aa10.24□□□□□ -0.77
SMPDL3A-201ENST00000368440 C6orf223Q8N319 242 aa10.24□□□□□ -0.77
SMPDL3A-201ENST00000368440 OR10D4PQ8NGN7 298 aa10.24□□□□□ -0.77
SMPDL3A-201ENST00000368440 FAT2Q9NYQ8 4349 aa10.24□□□□□ -0.77
SMPDL3A-201ENST00000368440 PMCHL1Q16048 86 aa10.23□□□□□ -0.77
SMPDL3A-201ENST00000368440 FAM19A2Q8N3H0 131 aa10.23□□□□□ -0.77
SMPDL3A-201ENST00000368440 TRAV8-6A0A0B4J262 113 aa10.23□□□□□ -0.77
SMPDL3A-201ENST00000368440 Q8N3U1 123 aa10.23□□□□□ -0.77
SMPDL3A-201ENST00000368440 PRSS3P2Q8NHM4 247 aa10.23□□□□□ -0.77
SMPDL3A-201ENST00000368440 URB1-AS1Q96HZ7 61 aa10.23□□□□□ -0.77
SMPDL3A-201ENST00000368440 TNFRSF6BO95407 300 aa10.22□□□□□ -0.77
SMPDL3A-201ENST00000368440 IFI27P40305 119 aaPredicted RBP10.22□□□□□ -0.77
SMPDL3A-201ENST00000368440 PACRGQ96M98 296 aaPredicted RBP10.22□□□□□ -0.77
SMPDL3A-201ENST00000368440 HSBP1O75506 76 aa10.21□□□□□ -0.77
SMPDL3A-201ENST00000368440 PPBPP02775 128 aa10.21□□□□□ -0.77
SMPDL3A-201ENST00000368440 AMTP48728 403 aa10.21□□□□□ -0.77
SMPDL3A-201ENST00000368440 TMEM18Q96B42 140 aa10.21□□□□□ -0.77
SMPDL3A-201ENST00000368440 RPL39LQ96EH5 51 aaKnown RBP10.21□□□□□ -0.77
SMPDL3A-201ENST00000368440 TNFRSF18Q9Y5U5 241 aa10.21□□□□□ -0.77
SMPDL3A-201ENST00000368440 H7C1H1 209 aa10.21□□□□□ -0.78
SMPDL3A-201ENST00000368440 FA2HQ7L5A8 372 aa10.21□□□□□ -0.78
SMPDL3A-201ENST00000368440 PRSS29PA6NIE9 313 aa10.2□□□□□ -0.78
SMPDL3A-201ENST00000368440 IGHV3-30P01768 117 aa10.2□□□□□ -0.78
SMPDL3A-201ENST00000368440 IGHV3-33P01772 117 aa10.2□□□□□ -0.78
SMPDL3A-201ENST00000368440 LINC00614P0C842 121 aa10.2□□□□□ -0.78
SMPDL3A-201ENST00000368440 IGHV3-30-3P0DP02 117 aa10.2□□□□□ -0.78
SMPDL3A-201ENST00000368440 IGHV3-30-5P0DP03 117 aa10.2□□□□□ -0.78
SMPDL3A-201ENST00000368440 LINC01556Q5JQF7 62 aa10.2□□□□□ -0.78
SMPDL3A-201ENST00000368440 LINC00336Q6ZUF6 198 aa10.2□□□□□ -0.78
SMPDL3A-201ENST00000368440 MRAP2Q96G30 205 aa10.2□□□□□ -0.78
SMPDL3A-201ENST00000368440 MAP1LC3AQ9H492 121 aa10.2□□□□□ -0.78
SMPDL3A-201ENST00000368440 NRACQ8N912 160 aa10.19□□□□□ -0.78
SMPDL3A-201ENST00000368440 DNAJC30Q96LL9 226 aa10.19□□□□□ -0.78
SMPDL3A-201ENST00000368440 ESDP10768 282 aa10.19□□□□□ -0.78
SMPDL3A-201ENST00000368440 NTM-AS1Q6ZSK4 140 aa10.19□□□□□ -0.78
SMPDL3A-201ENST00000368440 NIT2Q9NQR4 276 aa10.19□□□□□ -0.78
SMPDL3A-201ENST00000368440 HECTD4Q9Y4D8 3996 aa10.18□□□□□ -0.78
SMPDL3A-201ENST00000368440 TRAV9-2A0A087WT02 112 aa10.17□□□□□ -0.78
SMPDL3A-201ENST00000368440 TRBV6-8A0A0A6YYG3 113 aa10.17□□□□□ -0.78
SMPDL3A-201ENST00000368440 TNP2Q05952 138 aa10.17□□□□□ -0.78
SMPDL3A-201ENST00000368440 Q6ZRN7 208 aaPredicted RBP10.17□□□□□ -0.78
SMPDL3A-201ENST00000368440 DAZ4Q86SG3 579 aaKnown RBP10.17□□□□□ -0.78
SMPDL3A-201ENST00000368440 DEFB104AQ8WTQ1 72 aa10.17□□□□□ -0.78
SMPDL3A-201ENST00000368440 DAZ3Q9NR90 486 aaKnown RBP10.17□□□□□ -0.78
SMPDL3A-201ENST00000368440 AP5S1Q9NUS5 200 aa10.17□□□□□ -0.78
SMPDL3A-201ENST00000368440 PKD1P98161 4303 aa10.17□□□□□ -0.78
SMPDL3A-201ENST00000368440 A0A1B0GVY2 172 aa10.17□□□□□ -0.78
SMPDL3A-201ENST00000368440 CHCHD1Q96BP2 118 aaKnown RBP10.17□□□□□ -0.78
SMPDL3A-201ENST00000368440 LAMTOR2Q9Y2Q5 125 aa10.17□□□□□ -0.78
SMPDL3A-201ENST00000368440 IGHV1-24A0A0C4DH33 117 aa10.16□□□□□ -0.78
SMPDL3A-201ENST00000368440 K7EP13 123 aa10.15□□□□□ -0.78
SMPDL3A-201ENST00000368440 C10orf126Q8N4M7 172 aa10.15□□□□□ -0.78
SMPDL3A-201ENST00000368440 IBA57-AS1B1ANH7 110 aa10.15□□□□□ -0.79
SMPDL3A-201ENST00000368440 TCAPO15273 167 aa10.15□□□□□ -0.79
SMPDL3A-201ENST00000368440 BTF3P20290 206 aaKnown RBP10.15□□□□□ -0.79
SMPDL3A-201ENST00000368440 KRTDAPP60985 99 aa10.14□□□□□ -0.79
SMPDL3A-201ENST00000368440 SUMO2P61956 95 aaKnown RBP10.14□□□□□ -0.79
SMPDL3A-201ENST00000368440 NXT2Q9NPJ8 142 aaKnown RBP10.13□□□□□ -0.79
SMPDL3A-201ENST00000368440 TMEM97Q5BJF2 176 aa10.13□□□□□ -0.79
SMPDL3A-201ENST00000368440 LINC00173Q6ZV60 143 aa10.13□□□□□ -0.79
SMPDL3A-201ENST00000368440 Q8N8P6 123 aa10.13□□□□□ -0.79
SMPDL3A-201ENST00000368440 CHCHD5Q9BSY4 110 aa10.13□□□□□ -0.79
SMPDL3A-201ENST00000368440 SMIM2Q9BVW6 85 aa10.13□□□□□ -0.79
SMPDL3A-201ENST00000368440 Q9HAA7 133 aa10.13□□□□□ -0.79
SMPDL3A-201ENST00000368440 ST20Q9HBF5 79 aa10.13□□□□□ -0.79
SMPDL3A-201ENST00000368440 MPV17L2Q567V2 206 aa10.12□□□□□ -0.79
SMPDL3A-201ENST00000368440 PYY3Q5JQD4 70 aa10.12□□□□□ -0.79
SMPDL3A-201ENST00000368440 DNAH11Q96DT5 4516 aa10.11□□□□□ -0.79
SMPDL3A-201ENST00000368440 TRBV25-1A0A075B6N4 114 aa10.11□□□□□ -0.79
SMPDL3A-201ENST00000368440 SDHAF1A6NFY7 115 aa10.11□□□□□ -0.79
SMPDL3A-201ENST00000368440 TMEM262E9PQX1 116 aa10.11□□□□□ -0.79
SMPDL3A-201ENST00000368440 C20orf78Q9BR46 151 aa10.11□□□□□ -0.79
SMPDL3A-201ENST00000368440 A0A087WX48 190 aa10.1□□□□□ -0.79
SMPDL3A-201ENST00000368440 TRBV6-5A0A0K0K1A5 114 aa10.1□□□□□ -0.79
SMPDL3A-201ENST00000368440 H0Y8G0 127 aa10.1□□□□□ -0.79
SMPDL3A-201ENST00000368440 LEPROTL1O95214 131 aa10.1□□□□□ -0.79
SMPDL3A-201ENST00000368440 SCGB1D1O95968 90 aa10.1□□□□□ -0.79
SMPDL3A-201ENST00000368440 PPP1R17O96001 155 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms