RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 DNAH6Q9C0G6 4158 aa8.69□□□□□ -1.02
EFNA1-201ENST00000368406 COLCA2A8K830 154 aa8.69□□□□□ -1.02
EFNA1-201ENST00000368406 WFDC10BQ8IUB3 73 aa8.69□□□□□ -1.02
EFNA1-201ENST00000368406 TMEM243Q9BU79 118 aa8.69□□□□□ -1.02
EFNA1-201ENST00000368406 TRBV27A0A0K0K1C4 114 aa8.68□□□□□ -1.02
EFNA1-201ENST00000368406 TMEM262E9PQX1 116 aa8.68□□□□□ -1.02
EFNA1-201ENST00000368406 TCAPO15273 167 aa8.68□□□□□ -1.02
EFNA1-201ENST00000368406 SIVA1O15304 175 aa8.68□□□□□ -1.02
EFNA1-201ENST00000368406 POLR2KP53803 58 aaKnown RBP8.68□□□□□ -1.02
EFNA1-201ENST00000368406 ALKBH7Q9BT30 221 aaPredicted RBP8.68□□□□□ -1.02
EFNA1-201ENST00000368406 UPK3BQ9BT76 320 aa8.68□□□□□ -1.02
EFNA1-201ENST00000368406 A0A087WX48 190 aa8.67□□□□□ -1.02
EFNA1-201ENST00000368406 TRGC2P03986 189 aa8.67□□□□□ -1.02
EFNA1-201ENST00000368406 PKIAP61925 76 aa8.67□□□□□ -1.02
EFNA1-201ENST00000368406 RPL32P62910 135 aaKnown RBP8.67□□□□□ -1.02
EFNA1-201ENST00000368406 NTM-AS1Q6ZSK4 140 aa8.67□□□□□ -1.02
EFNA1-201ENST00000368406 PRSS3P2Q8NHM4 247 aa8.67□□□□□ -1.02
EFNA1-201ENST00000368406 Q9H8V8 135 aa8.67□□□□□ -1.02
EFNA1-201ENST00000368406 NXT2Q9NPJ8 142 aaKnown RBP8.67□□□□□ -1.02
EFNA1-201ENST00000368406 IGLV2-18A0A075B6J9 118 aa8.66□□□□□ -1.02
EFNA1-201ENST00000368406 TSHBP01222 138 aa8.66□□□□□ -1.02
EFNA1-201ENST00000368406 GAGE6Q13070 117 aa8.66□□□□□ -1.02
EFNA1-201ENST00000368406 IQCJQ1A5X6 159 aa8.66□□□□□ -1.02
EFNA1-201ENST00000368406 IGHV3-30P01768 117 aa8.65□□□□□ -1.02
EFNA1-201ENST00000368406 IGHV3-33P01772 117 aa8.65□□□□□ -1.02
EFNA1-201ENST00000368406 IGHV3-30-3P0DP02 117 aa8.65□□□□□ -1.02
EFNA1-201ENST00000368406 IGHV3-30-5P0DP03 117 aa8.65□□□□□ -1.02
EFNA1-201ENST00000368406 AMMECR1LQ6DCA0 310 aa8.65□□□□□ -1.02
EFNA1-201ENST00000368406 FA2HQ7L5A8 372 aa8.65□□□□□ -1.02
EFNA1-201ENST00000368406 Q8N8P6 123 aa8.65□□□□□ -1.02
EFNA1-201ENST00000368406 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.64□□□□□ -1.03
EFNA1-201ENST00000368406 TRAV9-2A0A087WT02 112 aa8.64□□□□□ -1.03
EFNA1-201ENST00000368406 IGKV2-29A2NJV5 120 aaPredicted RBP8.64□□□□□ -1.03
EFNA1-201ENST00000368406 IFI27P40305 119 aaPredicted RBP8.64□□□□□ -1.03
EFNA1-201ENST00000368406 TTC32Q5I0X7 151 aa8.64□□□□□ -1.03
EFNA1-201ENST00000368406 TMEM18Q96B42 140 aa8.64□□□□□ -1.03
EFNA1-201ENST00000368406 M0R2N4 97 aa8.63□□□□□ -1.03
EFNA1-201ENST00000368406 SMAGPQ0VAQ4 97 aa8.63□□□□□ -1.03
EFNA1-201ENST00000368406 RNASEKQ6P5S7 137 aaKnown RBP8.63□□□□□ -1.03
EFNA1-201ENST00000368406 Q6ZR54 194 aa8.63□□□□□ -1.03
EFNA1-201ENST00000368406 PRSS47A8MTI9 375 aa8.63□□□□□ -1.03
EFNA1-201ENST00000368406 LAGE3Q14657 143 aa8.63□□□□□ -1.03
EFNA1-201ENST00000368406 ORMDL2Q53FV1 153 aa8.63□□□□□ -1.03
EFNA1-201ENST00000368406 NIT1Q86X76 327 aa8.63□□□□□ -1.03
EFNA1-201ENST00000368406 C18orf32Q8TCD1 76 aa8.63□□□□□ -1.03
EFNA1-201ENST00000368406 DNAH10OSP0CZ25 163 aa8.62□□□□□ -1.03
EFNA1-201ENST00000368406 RAB5BP61020 215 aa8.62□□□□□ -1.03
EFNA1-201ENST00000368406 MPV17L2Q567V2 206 aa8.62□□□□□ -1.03
EFNA1-201ENST00000368406 LINC01556Q5JQF7 62 aa8.62□□□□□ -1.03
EFNA1-201ENST00000368406 BAGE3Q86Y29 109 aa8.62□□□□□ -1.03
EFNA1-201ENST00000368406 C10orf126Q8N4M7 172 aa8.62□□□□□ -1.03
EFNA1-201ENST00000368406 TMEM101Q96IK0 257 aa8.62□□□□□ -1.03
EFNA1-201ENST00000368406 CHCHD7Q9BUK0 85 aa8.62□□□□□ -1.03
EFNA1-201ENST00000368406 FRAS1Q86XX4 4008 aa8.61□□□□□ -1.03
EFNA1-201ENST00000368406 DNAH10Q8IVF4 4471 aa8.61□□□□□ -1.03
EFNA1-201ENST00000368406 NBDYA0A0U1RRE5 68 aa8.61□□□□□ -1.03
EFNA1-201ENST00000368406 H7C423 109 aa8.61□□□□□ -1.03
EFNA1-201ENST00000368406 K7EMI3 77 aa8.61□□□□□ -1.03
EFNA1-201ENST00000368406 ANGP03950 147 aaKnown RBP8.61□□□□□ -1.03
EFNA1-201ENST00000368406 BTF3P20290 206 aaKnown RBP8.61□□□□□ -1.03
EFNA1-201ENST00000368406 DGAT2L7PQ6IED9 249 aa8.61□□□□□ -1.03
EFNA1-201ENST00000368406 Q8N3U1 123 aa8.61□□□□□ -1.03
EFNA1-201ENST00000368406 C1orf196B1AJZ1 125 aa8.6□□□□□ -1.03
EFNA1-201ENST00000368406 CRPP02741 224 aa8.6□□□□□ -1.03
EFNA1-201ENST00000368406 FGF6P10767 208 aa8.6□□□□□ -1.03
EFNA1-201ENST00000368406 ESDP10768 282 aa8.6□□□□□ -1.03
EFNA1-201ENST00000368406 G0S2P27469 103 aa8.6□□□□□ -1.03
EFNA1-201ENST00000368406 RBX1P62877 108 aa8.6□□□□□ -1.03
EFNA1-201ENST00000368406 Q8N976 141 aa8.6□□□□□ -1.03
EFNA1-201ENST00000368406 AP5S1Q9NUS5 200 aa8.6□□□□□ -1.03
EFNA1-201ENST00000368406 DNAH2Q9P225 4427 aa8.6□□□□□ -1.03
EFNA1-201ENST00000368406 EPPK1P58107 5090 aaKnown RBP8.59□□□□□ -1.03
EFNA1-201ENST00000368406 K7EP13 123 aa8.59□□□□□ -1.03
EFNA1-201ENST00000368406 ZNF25P17030 456 aaPredicted RBP8.59□□□□□ -1.03
EFNA1-201ENST00000368406 C20orf203Q8NBC4 194 aa8.59□□□□□ -1.03
EFNA1-201ENST00000368406 OR5A1Q8NGJ0 315 aa8.59□□□□□ -1.03
EFNA1-201ENST00000368406 KLK12Q9UKR0 248 aa8.59□□□□□ -1.03
EFNA1-201ENST00000368406 CYSLTR1Q9Y271 337 aa8.59□□□□□ -1.03
EFNA1-201ENST00000368406 LINC00614P0C842 121 aa8.58□□□□□ -1.04
EFNA1-201ENST00000368406 RPL39P62891 51 aaKnown RBP8.58□□□□□ -1.04
EFNA1-201ENST00000368406 CLPSL2Q6UWE3 100 aa8.58□□□□□ -1.04
EFNA1-201ENST00000368406 LINC00336Q6ZUF6 198 aa8.58□□□□□ -1.04
EFNA1-201ENST00000368406 C2orf66Q6UXQ4 117 aa8.57□□□□□ -1.04
EFNA1-201ENST00000368406 Q9HAA7 133 aa8.57□□□□□ -1.04
EFNA1-201ENST00000368406 IGKV3OR2-268A0A0C4DH90 116 aa8.56□□□□□ -1.04
EFNA1-201ENST00000368406 C1orf134Q5TEV5 83 aa8.56□□□□□ -1.04
EFNA1-201ENST00000368406 UBE2WQ96B02 151 aa8.56□□□□□ -1.04
EFNA1-201ENST00000368406 SPANXA1Q9NS26 97 aa8.56□□□□□ -1.04
EFNA1-201ENST00000368406 IGLV4-60A0A075B6I1 120 aa8.55□□□□□ -1.04
EFNA1-201ENST00000368406 A0A1B0GUV1 79 aa8.55□□□□□ -1.04
EFNA1-201ENST00000368406 RTL8CO15255 209 aa8.55□□□□□ -1.04
EFNA1-201ENST00000368406 HSBP1O75506 76 aa8.55□□□□□ -1.04
EFNA1-201ENST00000368406 Q0VG73 95 aa8.55□□□□□ -1.04
EFNA1-201ENST00000368406 PMCHL1Q16048 86 aa8.55□□□□□ -1.04
EFNA1-201ENST00000368406 MRPL52Q86TS9 123 aaKnown RBP8.55□□□□□ -1.04
EFNA1-201ENST00000368406 LINC00269Q8N2A0 174 aa8.55□□□□□ -1.04
EFNA1-201ENST00000368406 CHCHD1Q96BP2 118 aaKnown RBP8.55□□□□□ -1.04
EFNA1-201ENST00000368406 KRTAP1-5Q9BYS1 174 aa8.55□□□□□ -1.04
EFNA1-201ENST00000368406 UBE2D4Q9Y2X8 147 aa8.55□□□□□ -1.04
EFNA1-201ENST00000368406 IBA57-AS1B1ANH7 110 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms