RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 CKS1BP61024 79 aa8.54□□□□□ -1.04
USF1-201ENST00000368019 C9orf85Q96MD7 179 aa8.54□□□□□ -1.04
USF1-201ENST00000368019 TP53TG1Q9Y2A0 90 aa8.54□□□□□ -1.04
USF1-201ENST00000368019 IGHV3-49A0A0A0MS15 119 aa8.53□□□□□ -1.04
USF1-201ENST00000368019 SDHAF1A6NFY7 115 aa8.53□□□□□ -1.04
USF1-201ENST00000368019 LINC01548A6NM66 108 aa8.53□□□□□ -1.04
USF1-201ENST00000368019 LEPROTO15243 131 aa8.53□□□□□ -1.04
USF1-201ENST00000368019 IGHG2P01859 326 aa8.53□□□□□ -1.04
USF1-201ENST00000368019 PRB2P02812 416 aaPredicted RBP8.53□□□□□ -1.04
USF1-201ENST00000368019 RNASE4P34096 147 aaKnown RBP8.53□□□□□ -1.04
USF1-201ENST00000368019 PSMB2P49721 201 aa8.53□□□□□ -1.04
USF1-201ENST00000368019 LY6EQ16553 131 aa8.53□□□□□ -1.04
USF1-201ENST00000368019 FAM159AQ6UWV7 190 aa8.53□□□□□ -1.04
USF1-201ENST00000368019 Q6ZQT7 251 aa8.53□□□□□ -1.04
USF1-201ENST00000368019 Q8N2B8 174 aa8.53□□□□□ -1.04
USF1-201ENST00000368019 RNF152Q8N8N0 203 aa8.53□□□□□ -1.04
USF1-201ENST00000368019 C11orf44Q8N8P7 122 aa8.53□□□□□ -1.04
USF1-201ENST00000368019 SYT8Q8NBV8 401 aa8.53□□□□□ -1.04
USF1-201ENST00000368019 AMELXQ99217 191 aa8.53□□□□□ -1.04
USF1-201ENST00000368019 MDFICQ9P1T7 246 aa8.53□□□□□ -1.04
USF1-201ENST00000368019 PRO1854Q9UHT4 67 aa8.53□□□□□ -1.04
USF1-201ENST00000368019 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.52□□□□□ -1.05
USF1-201ENST00000368019 ZNF688P0C7X2 276 aa8.52□□□□□ -1.05
USF1-201ENST00000368019 SUMO4Q6EEV6 95 aa8.52□□□□□ -1.05
USF1-201ENST00000368019 ZNF702PQ9H963 129 aa8.52□□□□□ -1.05
USF1-201ENST00000368019 LOC107984156A0A0G2JMH3 177 aa8.51□□□□□ -1.05
USF1-201ENST00000368019 ADARB2-AS1A8MUL3 147 aa8.51□□□□□ -1.05
USF1-201ENST00000368019 J3QQQ9 107 aa8.51□□□□□ -1.05
USF1-201ENST00000368019 TCL1BO95988 128 aa8.51□□□□□ -1.05
USF1-201ENST00000368019 CFC1BP0CG36 223 aa8.51□□□□□ -1.05
USF1-201ENST00000368019 CFC1P0CG37 223 aa8.51□□□□□ -1.05
USF1-201ENST00000368019 LGALS3P17931 250 aaKnown RBP8.51□□□□□ -1.05
USF1-201ENST00000368019 INSL3P51460 131 aa8.51□□□□□ -1.05
USF1-201ENST00000368019 OXLD1Q5BKU9 147 aa8.51□□□□□ -1.05
USF1-201ENST00000368019 UNQ9165/PRO28630Q6UXU0 137 aa8.51□□□□□ -1.05
USF1-201ENST00000368019 Q6ZUT4 128 aa8.51□□□□□ -1.05
USF1-201ENST00000368019 ARL17AQ8IVW1 177 aa8.51□□□□□ -1.05
USF1-201ENST00000368019 ZNF256Q9Y2P7 627 aaPredicted RBP8.51□□□□□ -1.05
USF1-201ENST00000368019 TMEM223A0PJW6 202 aa8.5□□□□□ -1.05
USF1-201ENST00000368019 GNRH2O43555 120 aa8.5□□□□□ -1.05
USF1-201ENST00000368019 SPINK8P0C7L1 97 aa8.5□□□□□ -1.05
USF1-201ENST00000368019 TRPT1Q86TN4 253 aaKnown RBP8.5□□□□□ -1.05
USF1-201ENST00000368019 CARD19Q96LW7 228 aa8.5□□□□□ -1.05
USF1-201ENST00000368019 DAZ1Q9NQZ3 744 aaKnown RBP8.5□□□□□ -1.05
USF1-201ENST00000368019 A6NDX4 124 aa8.49□□□□□ -1.05
USF1-201ENST00000368019 IGLV1-40P01703 118 aa8.49□□□□□ -1.05
USF1-201ENST00000368019 CD28P10747 220 aa8.49□□□□□ -1.05
USF1-201ENST00000368019 KLHL30-AS1Q8NEE0 82 aa8.49□□□□□ -1.05
USF1-201ENST00000368019 RNF183Q96D59 192 aa8.49□□□□□ -1.05
USF1-201ENST00000368019 RHPN1-AS1Q9BWJ2 59 aa8.49□□□□□ -1.05
USF1-201ENST00000368019 IGHV3-16A0A0C4DH30 117 aa8.48□□□□□ -1.05
USF1-201ENST00000368019 IGHV3-33P01772 117 aa8.48□□□□□ -1.05
USF1-201ENST00000368019 TSPEAR-AS2P59090 65 aa8.48□□□□□ -1.05
USF1-201ENST00000368019 TMEM170BQ5T4T1 132 aa8.48□□□□□ -1.05
USF1-201ENST00000368019 Q6Q795 121 aa8.48□□□□□ -1.05
USF1-201ENST00000368019 WFDC9Q8NEX5 89 aa8.48□□□□□ -1.05
USF1-201ENST00000368019 MRAPQ8TCY5 172 aa8.48□□□□□ -1.05
USF1-201ENST00000368019 TMEM263Q8WUH6 116 aaKnown RBP8.48□□□□□ -1.05
USF1-201ENST00000368019 CITED2Q99967 270 aaPredicted RBP8.48□□□□□ -1.05
USF1-201ENST00000368019 GEMIN7Q9H840 131 aaKnown RBP8.48□□□□□ -1.05
USF1-201ENST00000368019 SPANXA1Q9NS26 97 aa8.48□□□□□ -1.05
USF1-201ENST00000368019 PYGO1Q9Y3Y4 419 aa8.48□□□□□ -1.05
USF1-201ENST00000368019 TENM3Q9P273 2699 aa8.47□□□□□ -1.05
USF1-201ENST00000368019 TRBV30A0A0K0K1B3 111 aa8.47□□□□□ -1.05
USF1-201ENST00000368019 M0QY20 66 aa8.47□□□□□ -1.05
USF1-201ENST00000368019 M0R2P5 195 aa8.47□□□□□ -1.05
USF1-201ENST00000368019 RPL13AP40429 203 aaKnown RBP8.47□□□□□ -1.05
USF1-201ENST00000368019 CFHR3Q02985 330 aa8.47□□□□□ -1.05
USF1-201ENST00000368019 PIK3CD-AS1Q5SR53 167 aa8.47□□□□□ -1.05
USF1-201ENST00000368019 Q6ZS46 218 aa8.47□□□□□ -1.05
USF1-201ENST00000368019 C20orf203Q8NBC4 194 aa8.47□□□□□ -1.05
USF1-201ENST00000368019 SVIPQ8NHG7 77 aa8.47□□□□□ -1.05
USF1-201ENST00000368019 ZNRF2Q8NHG8 242 aa8.47□□□□□ -1.05
USF1-201ENST00000368019 DCANP1Q8TF63 244 aa8.47□□□□□ -1.05
USF1-201ENST00000368019 KMT2CQ8NEZ4 4911 aaKnown RBP8.46□□□□□ -1.05
USF1-201ENST00000368019 J3KRW8 73 aa8.46□□□□□ -1.06
USF1-201ENST00000368019 RHODO00212 210 aa8.46□□□□□ -1.06
USF1-201ENST00000368019 SLC25A20O43772 301 aa8.46□□□□□ -1.06
USF1-201ENST00000368019 TRBV12-3P01733 135 aa8.46□□□□□ -1.06
USF1-201ENST00000368019 SCGB1C2P0DMR2 95 aa8.46□□□□□ -1.06
USF1-201ENST00000368019 ZNF22P17026 224 aaPredicted RBP8.46□□□□□ -1.06
USF1-201ENST00000368019 XGP55808 180 aa8.46□□□□□ -1.06
USF1-201ENST00000368019 BLCAPP62952 87 aa8.46□□□□□ -1.06
USF1-201ENST00000368019 TMEM219Q86XT9 240 aa8.46□□□□□ -1.06
USF1-201ENST00000368019 ANKRD29Q8N6D5 301 aa8.46□□□□□ -1.06
USF1-201ENST00000368019 ERG28Q9UKR5 140 aa8.46□□□□□ -1.06
USF1-201ENST00000368019 TRGV11A0A075B6L2 103 aa8.45□□□□□ -1.06
USF1-201ENST00000368019 A4D1N5 150 aa8.45□□□□□ -1.06
USF1-201ENST00000368019 I3L3M4 83 aa8.45□□□□□ -1.06
USF1-201ENST00000368019 FHL3Q13643 280 aa8.45□□□□□ -1.06
USF1-201ENST00000368019 ATXN8Q156A1 80 aa8.45□□□□□ -1.06
USF1-201ENST00000368019 MRPL23Q16540 153 aaKnown RBP8.45□□□□□ -1.06
USF1-201ENST00000368019 PTH2Q96A98 100 aa8.45□□□□□ -1.06
USF1-201ENST00000368019 SPANXDQ9BXN6 97 aa8.45□□□□□ -1.06
USF1-201ENST00000368019 SPANXCQ9NY87 97 aa8.45□□□□□ -1.06
USF1-201ENST00000368019 MUC4Q99102 2169 aa8.45□□□□□ -1.06
USF1-201ENST00000368019 DNAH9Q9NYC9 4486 aa8.44□□□□□ -1.06
USF1-201ENST00000368019 F5H697 171 aa8.44□□□□□ -1.06
USF1-201ENST00000368019 F6UB75 175 aa8.44□□□□□ -1.06
USF1-201ENST00000368019 MT-ATP8P03928 68 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms