RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 BPY2O14599 106 aa5.62□□□□□ -1.51
SYNE1-208ENST00000367256 C11orf53Q8IXP5 236 aa5.62□□□□□ -1.51
SYNE1-208ENST00000367256 ZNF462Q96JM2 2506 aa5.62□□□□□ -1.51
SYNE1-208ENST00000367256 LRRK2Q5S007 2527 aa5.62□□□□□ -1.51
SYNE1-208ENST00000367256 PIEZO2Q9H5I5 2752 aa5.62□□□□□ -1.51
SYNE1-208ENST00000367256 TMEM89A2RUT3 159 aa5.62□□□□□ -1.51
SYNE1-208ENST00000367256 MIR7-3HGQ8N6C7 128 aa5.62□□□□□ -1.51
SYNE1-208ENST00000367256 IGHV7-81A0A0B4J1V7 117 aa5.62□□□□□ -1.51
SYNE1-208ENST00000367256 IGHV4-38-2P0DP08 117 aa5.62□□□□□ -1.51
SYNE1-208ENST00000367256 TMEM263Q8WUH6 116 aaKnown RBP5.62□□□□□ -1.51
SYNE1-208ENST00000367256 ESM1Q9NQ30 184 aa5.62□□□□□ -1.51
SYNE1-208ENST00000367256 NDUFC2-KCTD14E9PQ53 114 aa5.62□□□□□ -1.51
SYNE1-208ENST00000367256 LRRC75A-AS1Q8N1F1 130 aa5.62□□□□□ -1.51
SYNE1-208ENST00000367256 PLA2G2EQ9NZK7 142 aa5.62□□□□□ -1.51
SYNE1-208ENST00000367256 MDFICQ9P1T7 246 aa5.62□□□□□ -1.51
SYNE1-208ENST00000367256 WDR87Q6ZQQ6 2873 aa5.62□□□□□ -1.51
SYNE1-208ENST00000367256 FAM240AA0A1B0GVK7 77 aa5.62□□□□□ -1.51
SYNE1-208ENST00000367256 MRPS36P82909 103 aaKnown RBP5.62□□□□□ -1.51
SYNE1-208ENST00000367256 MSRB1Q9NZV6 116 aa5.62□□□□□ -1.51
SYNE1-208ENST00000367256 DEFB4AO15263 64 aa5.62□□□□□ -1.51
SYNE1-208ENST00000367256 J3QKU1 62 aa5.62□□□□□ -1.51
SYNE1-208ENST00000367256 WISP1O95388 367 aa5.61□□□□□ -1.51
SYNE1-208ENST00000367256 CTSGP08311 255 aa5.61□□□□□ -1.51
SYNE1-208ENST00000367256 P0DMU3 169 aa5.61□□□□□ -1.51
SYNE1-208ENST00000367256 FAM231AP0DMU4 169 aa5.61□□□□□ -1.51
SYNE1-208ENST00000367256 FAM231CP0DMU5 169 aa5.61□□□□□ -1.51
SYNE1-208ENST00000367256 KLK5Q9Y337 293 aaPredicted RBP5.61□□□□□ -1.51
SYNE1-208ENST00000367256 WFDC10BQ8IUB3 73 aa5.61□□□□□ -1.51
SYNE1-208ENST00000367256 AJUBAQ96IF1 538 aa5.61□□□□□ -1.51
SYNE1-208ENST00000367256 C5orf56Q8N8D9 126 aa5.61□□□□□ -1.51
SYNE1-208ENST00000367256 TRBV10-1A0A0K0K1A3 114 aa5.61□□□□□ -1.51
SYNE1-208ENST00000367256 LY6G6EA0A0G2JKS1 128 aa5.61□□□□□ -1.51
SYNE1-208ENST00000367256 PATE2Q6UY27 113 aa5.61□□□□□ -1.51
SYNE1-208ENST00000367256 KLK12Q9UKR0 248 aa5.61□□□□□ -1.51
SYNE1-208ENST00000367256 U3KQA8 63 aa5.61□□□□□ -1.51
SYNE1-208ENST00000367256 ODF3Q96PU9 254 aa5.61□□□□□ -1.51
SYNE1-208ENST00000367256 P0C879 139 aa5.6□□□□□ -1.51
SYNE1-208ENST00000367256 CTSZQ9UBR2 303 aa5.6□□□□□ -1.51
SYNE1-208ENST00000367256 ENHOQ6UWT2 76 aa5.6□□□□□ -1.51
SYNE1-208ENST00000367256 PKD1L2Q7Z442 2459 aa5.6□□□□□ -1.51
SYNE1-208ENST00000367256 CENPVL3A0A0U1RRI6 287 aa5.6□□□□□ -1.51
SYNE1-208ENST00000367256 FN1P02751 2386 aaKnown RBP5.6□□□□□ -1.51
SYNE1-208ENST00000367256 TTTY13Q9BZ97 58 aa5.59□□□□□ -1.51
SYNE1-208ENST00000367256 MT-ATP8P03928 68 aa5.59□□□□□ -1.51
SYNE1-208ENST00000367256 POLQO75417 2590 aa5.59□□□□□ -1.51
SYNE1-208ENST00000367256 WFDC11Q8NEX6 87 aa5.59□□□□□ -1.51
SYNE1-208ENST00000367256 IGKV2-24A0A0C4DH68 120 aa5.59□□□□□ -1.51
SYNE1-208ENST00000367256 GPHB5Q86YW7 130 aa5.59□□□□□ -1.51
SYNE1-208ENST00000367256 USP9XQ93008 2570 aaPredicted RBP5.59□□□□□ -1.51
SYNE1-208ENST00000367256 F8WDY8 70 aa5.59□□□□□ -1.51
SYNE1-208ENST00000367256 HIST2H2BDQ6DRA6 164 aa5.59□□□□□ -1.51
SYNE1-208ENST00000367256 C20orf203Q8NBC4 194 aa5.59□□□□□ -1.51
SYNE1-208ENST00000367256 H7C423 109 aa5.59□□□□□ -1.52
SYNE1-208ENST00000367256 ABCA12Q86UK0 2595 aa5.58□□□□□ -1.52
SYNE1-208ENST00000367256 SPRNQ5BIV9 151 aa5.58□□□□□ -1.52
SYNE1-208ENST00000367256 PRO0628Q9UI54 55 aa5.58□□□□□ -1.52
SYNE1-208ENST00000367256 TP73-AS1Q9UF72 201 aa5.58□□□□□ -1.52
SYNE1-208ENST00000367256 PRAC2D3DTV9 90 aa5.58□□□□□ -1.52
SYNE1-208ENST00000367256 PIK3CD-AS1Q5SR53 167 aa5.58□□□□□ -1.52
SYNE1-208ENST00000367256 ZFAND2AQ8N6M9 145 aa5.58□□□□□ -1.52
SYNE1-208ENST00000367256 GRNP28799 593 aaKnown RBP5.58□□□□□ -1.52
SYNE1-208ENST00000367256 DEFB113Q30KQ7 82 aa5.58□□□□□ -1.52
SYNE1-208ENST00000367256 C1orf195Q5TG92 126 aa5.58□□□□□ -1.52
SYNE1-208ENST00000367256 ZNF524Q96C55 264 aa5.58□□□□□ -1.52
SYNE1-208ENST00000367256 LRCOL1A6NCL2 159 aa5.58□□□□□ -1.52
SYNE1-208ENST00000367256 NDUFA7O95182 113 aa5.58□□□□□ -1.52
SYNE1-208ENST00000367256 UFSP1Q6NVU6 142 aa5.58□□□□□ -1.52
SYNE1-208ENST00000367256 LINC00574Q9H8X3 128 aa5.58□□□□□ -1.52
SYNE1-208ENST00000367256 C20orf197Q8N268 126 aa5.57□□□□□ -1.52
SYNE1-208ENST00000367256 C10orf105Q8TEF2 133 aa5.57□□□□□ -1.52
SYNE1-208ENST00000367256 LTBP2Q14767 1821 aa5.57□□□□□ -1.52
SYNE1-208ENST00000367256 EIF4EBP3O60516 100 aaPredicted RBP5.57□□□□□ -1.52
SYNE1-208ENST00000367256 TIMM17BO60830 172 aa5.57□□□□□ -1.52
SYNE1-208ENST00000367256 A6NED7 52 aa5.57□□□□□ -1.52
SYNE1-208ENST00000367256 REG3AQ06141 175 aa5.57□□□□□ -1.52
SYNE1-208ENST00000367256 U3KQK5 164 aa5.57□□□□□ -1.52
SYNE1-208ENST00000367256 TRBV30A0A0K0K1B3 111 aa5.57□□□□□ -1.52
SYNE1-208ENST00000367256 RBX1P62877 108 aa5.57□□□□□ -1.52
SYNE1-208ENST00000367256 IGLC6P0CF74 106 aa5.56□□□□□ -1.52
SYNE1-208ENST00000367256 BLCAPP62952 87 aa5.56□□□□□ -1.52
SYNE1-208ENST00000367256 LINC00269Q8N2A0 174 aa5.56□□□□□ -1.52
SYNE1-208ENST00000367256 YPEL4Q96NS1 127 aa5.56□□□□□ -1.52
SYNE1-208ENST00000367256 SIRPDQ9H106 197 aa5.56□□□□□ -1.52
SYNE1-208ENST00000367256 COL4A4P53420 1690 aaPredicted RBP5.56□□□□□ -1.52
SYNE1-208ENST00000367256 SCXQ7RTU7 201 aa5.56□□□□□ -1.52
SYNE1-208ENST00000367256 IGLV2-14P01704 120 aa5.56□□□□□ -1.52
SYNE1-208ENST00000367256 CRYGDP07320 174 aa5.56□□□□□ -1.52
SYNE1-208ENST00000367256 IGF2-ASQ6U949 168 aa5.56□□□□□ -1.52
SYNE1-208ENST00000367256 HIGD2AQ9BW72 106 aa5.56□□□□□ -1.52
SYNE1-208ENST00000367256 IGHV4-30-2A0A087WSY4 118 aa5.56□□□□□ -1.52
SYNE1-208ENST00000367256 IGHV4-61A0A0C4DH41 118 aa5.56□□□□□ -1.52
SYNE1-208ENST00000367256 MBD6Q96DN6 1003 aa5.56□□□□□ -1.52
SYNE1-208ENST00000367256 SMAD5-AS1Q9Y6J3 95 aa5.56□□□□□ -1.52
SYNE1-208ENST00000367256 CEMP1Q6PRD7 247 aaPredicted RBP5.56□□□□□ -1.52
SYNE1-208ENST00000367256 SERP2Q8N6R1 65 aa5.56□□□□□ -1.52
SYNE1-208ENST00000367256 A0A087WZ39 114 aa5.56□□□□□ -1.52
SYNE1-208ENST00000367256 FAM19A1Q7Z5A9 133 aa5.56□□□□□ -1.52
SYNE1-208ENST00000367256 NEXN-AS1Q8NBZ9 246 aa5.55□□□□□ -1.52
SYNE1-208ENST00000367256 FAM222AQ5U5X8 452 aa5.55□□□□□ -1.52
SYNE1-208ENST00000367256 SPRY4Q9C004 299 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms