RNA–Protein interactions for RNA: ENST00000366746.7

MRPL55-217, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-217ENST00000366746 C15orf56Q8N910 161 aa10.52□□□□□ -0.73
MRPL55-217ENST00000366746 LRP2P98164 4655 aa10.52□□□□□ -0.73
MRPL55-217ENST00000366746 IGKV2-24A0A0C4DH68 120 aa10.51□□□□□ -0.73
MRPL55-217ENST00000366746 IGKV3OR2-268A0A0C4DH90 116 aa10.51□□□□□ -0.73
MRPL55-217ENST00000366746 F2Z2F3 143 aa10.51□□□□□ -0.73
MRPL55-217ENST00000366746 H2AFB1P0C5Y9 115 aa10.51□□□□□ -0.73
MRPL55-217ENST00000366746 TRGC1P0CF51 173 aa10.51□□□□□ -0.73
MRPL55-217ENST00000366746 HIGD2BQ4VC39 106 aa10.51□□□□□ -0.73
MRPL55-217ENST00000366746 PRSS3P2Q8NHM4 247 aa10.51□□□□□ -0.73
MRPL55-217ENST00000366746 XKRY2A2RUG3 117 aa10.5□□□□□ -0.73
MRPL55-217ENST00000366746 PRR3P79522 188 aaKnown RBP10.5□□□□□ -0.73
MRPL55-217ENST00000366746 STPG4Q8N801 248 aa10.5□□□□□ -0.73
MRPL55-217ENST00000366746 LYPD6BQ8NI32 183 aa10.5□□□□□ -0.73
MRPL55-217ENST00000366746 CENPWQ5EE01 88 aa10.49□□□□□ -0.73
MRPL55-217ENST00000366746 IFNA1P01562 189 aa10.48□□□□□ -0.73
MRPL55-217ENST00000366746 NTF3P20783 257 aa10.48□□□□□ -0.73
MRPL55-217ENST00000366746 AMMECR1LQ6DCA0 310 aa10.48□□□□□ -0.73
MRPL55-217ENST00000366746 LYZL1Q6UWQ5 148 aa10.48□□□□□ -0.73
MRPL55-217ENST00000366746 C11orf52Q96A22 123 aa10.48□□□□□ -0.73
MRPL55-217ENST00000366746 A0A0J9YXV3 536 aa10.47□□□□□ -0.73
MRPL55-217ENST00000366746 C19orf71A6NCJ1 209 aa10.47□□□□□ -0.73
MRPL55-217ENST00000366746 SMLR1H3BR10 107 aa10.47□□□□□ -0.73
MRPL55-217ENST00000366746 ZNF345Q14585 488 aa10.47□□□□□ -0.73
MRPL55-217ENST00000366746 CHCHD10Q8WYQ3 142 aaPredicted RBP10.47□□□□□ -0.73
MRPL55-217ENST00000366746 MANBALQ9NQG1 85 aa10.47□□□□□ -0.73
MRPL55-217ENST00000366746 GNG13Q9P2W3 67 aa10.47□□□□□ -0.73
MRPL55-217ENST00000366746 GNG4P50150 75 aa10.46□□□□□ -0.73
MRPL55-217ENST00000366746 ODF1Q14990 250 aa10.46□□□□□ -0.73
MRPL55-217ENST00000366746 REG3GQ6UW15 175 aa10.46□□□□□ -0.73
MRPL55-217ENST00000366746 SPINK6Q6UWN8 80 aa10.46□□□□□ -0.73
MRPL55-217ENST00000366746 LINC00474Q9P2X8 69 aa10.46□□□□□ -0.73
MRPL55-217ENST00000366746 GVQW2A0A096LPI5 108 aaPredicted RBP10.45□□□□□ -0.74
MRPL55-217ENST00000366746 KANTRA0A1W2PQU2 76 aa10.45□□□□□ -0.74
MRPL55-217ENST00000366746 RAB19A4D1S5 217 aa10.45□□□□□ -0.74
MRPL55-217ENST00000366746 CCL20P78556 96 aa10.45□□□□□ -0.74
MRPL55-217ENST00000366746 RNASEKQ6P5S7 137 aaKnown RBP10.45□□□□□ -0.74
MRPL55-217ENST00000366746 C9orf62Q8N4C0 152 aa10.45□□□□□ -0.74
MRPL55-217ENST00000366746 SMIM12Q96EX1 92 aa10.45□□□□□ -0.74
MRPL55-217ENST00000366746 A0A096LNI7 61 aa10.44□□□□□ -0.74
MRPL55-217ENST00000366746 EIF5AP63241 154 aaKnown RBP10.44□□□□□ -0.74
MRPL55-217ENST00000366746 TWIST1Q15672 202 aa10.44□□□□□ -0.74
MRPL55-217ENST00000366746 BIN3Q9NQY0 253 aa10.44□□□□□ -0.74
MRPL55-217ENST00000366746 BATF3Q9NR55 127 aa10.44□□□□□ -0.74
MRPL55-217ENST00000366746 PKIGQ9Y2B9 76 aa10.44□□□□□ -0.74
MRPL55-217ENST00000366746 KRTAP10-8P60410 259 aa10.43□□□□□ -0.74
MRPL55-217ENST00000366746 H7C423 109 aa10.42□□□□□ -0.74
MRPL55-217ENST00000366746 BCL2L11O43521 198 aa10.42□□□□□ -0.74
MRPL55-217ENST00000366746 NCR2O95944 276 aa10.42□□□□□ -0.74
MRPL55-217ENST00000366746 GATD1Q8NB37 220 aa10.42□□□□□ -0.74
MRPL55-217ENST00000366746 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.41□□□□□ -0.74
MRPL55-217ENST00000366746 TRAV1-1A0A0B4J248 108 aa10.41□□□□□ -0.74
MRPL55-217ENST00000366746 TRAV26-2A0A0B4J265 109 aa10.41□□□□□ -0.74
MRPL55-217ENST00000366746 IGKV2-29A2NJV5 120 aaPredicted RBP10.41□□□□□ -0.74
MRPL55-217ENST00000366746 HMSDA8MTL9 139 aa10.41□□□□□ -0.74
MRPL55-217ENST00000366746 FGF6P10767 208 aa10.41□□□□□ -0.74
MRPL55-217ENST00000366746 FOXI1Q12951 378 aa10.41□□□□□ -0.74
MRPL55-217ENST00000366746 TNXBP22105 4242 aa10.41□□□□□ -0.74
MRPL55-217ENST00000366746 TEX46H3BTG2 121 aa10.4□□□□□ -0.74
MRPL55-217ENST00000366746 PDE6DO43924 150 aa10.4□□□□□ -0.74
MRPL55-217ENST00000366746 APCSP02743 223 aa10.4□□□□□ -0.74
MRPL55-217ENST00000366746 CTRLP40313 264 aa10.4□□□□□ -0.74
MRPL55-217ENST00000366746 Q6ZNX1 250 aa10.4□□□□□ -0.74
MRPL55-217ENST00000366746 Q6ZRP5 223 aa10.4□□□□□ -0.74
MRPL55-217ENST00000366746 MED9Q9NWA0 146 aa10.4□□□□□ -0.74
MRPL55-217ENST00000366746 XCL1P47992 114 aa10.39□□□□□ -0.75
MRPL55-217ENST00000366746 MEF2BQ02080 365 aaPredicted RBP10.39□□□□□ -0.75
MRPL55-217ENST00000366746 RGS21Q2M5E4 152 aa10.39□□□□□ -0.75
MRPL55-217ENST00000366746 SMIM15Q7Z3B0 74 aa10.39□□□□□ -0.75
MRPL55-217ENST00000366746 NUDT10Q8NFP7 164 aa10.39□□□□□ -0.75
MRPL55-217ENST00000366746 NUDT11Q96G61 164 aa10.39□□□□□ -0.75
MRPL55-217ENST00000366746 BTF3L4Q96K17 158 aa10.39□□□□□ -0.75
MRPL55-217ENST00000366746 TRBV20OR9-2A0A075B6H5 130 aa10.38□□□□□ -0.75
MRPL55-217ENST00000366746 IGHV1-58A0A0C4DH39 117 aa10.38□□□□□ -0.75
MRPL55-217ENST00000366746 ZNF25P17030 456 aaPredicted RBP10.38□□□□□ -0.75
MRPL55-217ENST00000366746 SRSF9Q13242 221 aaKnown RBP eCLIP10.38□□□□□ -0.75
MRPL55-217ENST00000366746 TEX261Q6UWH6 196 aa10.38□□□□□ -0.75
MRPL55-217ENST00000366746 OR5A1Q8NGJ0 315 aa10.38□□□□□ -0.75
MRPL55-217ENST00000366746 RPL39LQ96EH5 51 aaKnown RBP10.38□□□□□ -0.75
MRPL55-217ENST00000366746 TMEM101Q96IK0 257 aa10.38□□□□□ -0.75
MRPL55-217ENST00000366746 CARD19Q96LW7 228 aa10.38□□□□□ -0.75
MRPL55-217ENST00000366746 CNFNQ9BYD5 112 aa10.38□□□□□ -0.75
MRPL55-217ENST00000366746 CCL25O15444 150 aa10.37□□□□□ -0.75
MRPL55-217ENST00000366746 LINC00526Q96FQ7 95 aa10.37□□□□□ -0.75
MRPL55-217ENST00000366746 LINC00959A0A1B0GUT2 108 aa10.36□□□□□ -0.75
MRPL55-217ENST00000366746 SDHAF1A6NFY7 115 aa10.36□□□□□ -0.75
MRPL55-217ENST00000366746 ZNF561-AS1K7EIQ3 104 aa10.36□□□□□ -0.75
MRPL55-217ENST00000366746 PMCHP20382 165 aa10.36□□□□□ -0.75
MRPL55-217ENST00000366746 RPP21Q9H633 154 aaKnown RBP10.36□□□□□ -0.75
MRPL55-217ENST00000366746 SYCNQ0VAF6 134 aa10.35□□□□□ -0.75
MRPL55-217ENST00000366746 EIF5AL1Q6IS14 154 aaKnown RBP10.35□□□□□ -0.75
MRPL55-217ENST00000366746 I3L3M4 83 aa10.34□□□□□ -0.75
MRPL55-217ENST00000366746 FOXA3P55318 350 aaPredicted RBP10.34□□□□□ -0.75
MRPL55-217ENST00000366746 SS18Q15532 418 aa10.34□□□□□ -0.75
MRPL55-217ENST00000366746 RNASE7Q9H1E1 156 aaKnown RBP10.34□□□□□ -0.75
MRPL55-217ENST00000366746 GAS8-AS1O95177 125 aa10.33□□□□□ -0.76
MRPL55-217ENST00000366746 FAM231BA6NCW3 169 aa10.32□□□□□ -0.76
MRPL55-217ENST00000366746 BCL2P10415 239 aa10.32□□□□□ -0.76
MRPL55-217ENST00000366746 PTTG1IPP53801 180 aa10.32□□□□□ -0.76
MRPL55-217ENST00000366746 CD164L2Q6UWJ8 174 aa10.32□□□□□ -0.76
MRPL55-217ENST00000366746 ISOC2Q96AB3 205 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms