RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 NACAE9PAV3 2078 aa12.73□□□□□ -0.37
TRIM11-202ENST00000366699 J3QR89 54 aa12.73□□□□□ -0.37
TRIM11-202ENST00000366699 APOMO95445 188 aa12.73□□□□□ -0.37
TRIM11-202ENST00000366699 IGHV3-73A0A0B4J1V6 119 aa12.72□□□□□ -0.37
TRIM11-202ENST00000366699 ZNF22P17026 224 aaPredicted RBP12.72□□□□□ -0.37
TRIM11-202ENST00000366699 CRYBA4P53673 196 aa12.72□□□□□ -0.37
TRIM11-202ENST00000366699 NDUFA11Q86Y39 141 aa12.72□□□□□ -0.37
TRIM11-202ENST00000366699 GTSF1LQ9H1H1 148 aa12.72□□□□□ -0.37
TRIM11-202ENST00000366699 PRO0461Q9UI25 63 aa12.72□□□□□ -0.37
TRIM11-202ENST00000366699 TSPAN13O95857 204 aa12.72□□□□□ -0.37
TRIM11-202ENST00000366699 LYRM7Q5U5X0 104 aa12.72□□□□□ -0.37
TRIM11-202ENST00000366699 STHQ8IWL8 128 aa12.72□□□□□ -0.37
TRIM11-202ENST00000366699 ESM1Q9NQ30 184 aa12.71□□□□□ -0.37
TRIM11-202ENST00000366699 TSSC4Q9Y5U2 329 aaPredicted RBP12.71□□□□□ -0.37
TRIM11-202ENST00000366699 A0A0J9YXV3 536 aa12.71□□□□□ -0.37
TRIM11-202ENST00000366699 A0A1W2PRX2 142 aa12.71□□□□□ -0.37
TRIM11-202ENST00000366699 AZU1P20160 251 aa12.71□□□□□ -0.37
TRIM11-202ENST00000366699 PROK1P58294 105 aa12.71□□□□□ -0.37
TRIM11-202ENST00000366699 CUBNO60494 3623 aa12.71□□□□□ -0.37
TRIM11-202ENST00000366699 ETDBQ3ZM63 59 aa12.7□□□□□ -0.38
TRIM11-202ENST00000366699 SH2D6Q7Z4S9 175 aa12.7□□□□□ -0.38
TRIM11-202ENST00000366699 MTURNQ8N3F0 131 aa12.7□□□□□ -0.38
TRIM11-202ENST00000366699 YAE1D1Q9NRH1 226 aa12.7□□□□□ -0.38
TRIM11-202ENST00000366699 ITPR2Q14571 2701 aa12.7□□□□□ -0.38
TRIM11-202ENST00000366699 CD28P10747 220 aa12.7□□□□□ -0.38
TRIM11-202ENST00000366699 PLA2G2AP14555 144 aa12.7□□□□□ -0.38
TRIM11-202ENST00000366699 CFAP126Q5VTH2 177 aa12.7□□□□□ -0.38
TRIM11-202ENST00000366699 C11orf72Q8NBR9 251 aa12.7□□□□□ -0.38
TRIM11-202ENST00000366699 SIGMAR1Q99720 223 aa12.7□□□□□ -0.38
TRIM11-202ENST00000366699 FLNAP21333 2647 aaKnown RBP12.7□□□□□ -0.38
TRIM11-202ENST00000366699 LOC107984156A0A0G2JMH3 177 aa12.69□□□□□ -0.38
TRIM11-202ENST00000366699 CFC1BP0CG36 223 aa12.69□□□□□ -0.38
TRIM11-202ENST00000366699 CFC1P0CG37 223 aa12.69□□□□□ -0.38
TRIM11-202ENST00000366699 CMC4P56277 68 aaPredicted RBP12.69□□□□□ -0.38
TRIM11-202ENST00000366699 UBE2D3P61077 147 aa12.69□□□□□ -0.38
TRIM11-202ENST00000366699 UBE2D2P62837 147 aa12.69□□□□□ -0.38
TRIM11-202ENST00000366699 ARL17AQ8IVW1 177 aa12.69□□□□□ -0.38
TRIM11-202ENST00000366699 C11orf44Q8N8P7 122 aa12.69□□□□□ -0.38
TRIM11-202ENST00000366699 DNAJC30Q96LL9 226 aa12.69□□□□□ -0.38
TRIM11-202ENST00000366699 SMAGPQ0VAQ4 97 aa12.69□□□□□ -0.38
TRIM11-202ENST00000366699 ODF3L2Q3SX64 289 aa12.69□□□□□ -0.38
TRIM11-202ENST00000366699 C16orf95Q9H693 158 aa12.69□□□□□ -0.38
TRIM11-202ENST00000366699 GAGE12HA6NDE8 117 aa12.68□□□□□ -0.38
TRIM11-202ENST00000366699 PRM2P04554 102 aa12.68□□□□□ -0.38
TRIM11-202ENST00000366699 RNASE1P07998 156 aaKnown RBP12.68□□□□□ -0.38
TRIM11-202ENST00000366699 BEAN1Q3B7T3 259 aa12.68□□□□□ -0.38
TRIM11-202ENST00000366699 HIST2H2BDQ6DRA6 164 aa12.68□□□□□ -0.38
TRIM11-202ENST00000366699 MRPS36P82909 103 aaKnown RBP12.67□□□□□ -0.38
TRIM11-202ENST00000366699 C10orf126Q8N4M7 172 aa12.67□□□□□ -0.38
TRIM11-202ENST00000366699 PDZD2O15018 2839 aa12.67□□□□□ -0.38
TRIM11-202ENST00000366699 MYO9AB2RTY4 2548 aa12.67□□□□□ -0.38
TRIM11-202ENST00000366699 CITED2Q99967 270 aaPredicted RBP12.67□□□□□ -0.38
TRIM11-202ENST00000366699 XCL2Q9UBD3 114 aa12.67□□□□□ -0.38
TRIM11-202ENST00000366699 PRO1854Q9UHT4 67 aa12.67□□□□□ -0.38
TRIM11-202ENST00000366699 J3QKU1 62 aa12.66□□□□□ -0.38
TRIM11-202ENST00000366699 IGHV3-53P01767 116 aa12.66□□□□□ -0.38
TRIM11-202ENST00000366699 PSMB2P49721 201 aa12.66□□□□□ -0.38
TRIM11-202ENST00000366699 IGHV3-64A0A075B6Q5 118 aa12.66□□□□□ -0.38
TRIM11-202ENST00000366699 RS1O15537 224 aa12.66□□□□□ -0.38
TRIM11-202ENST00000366699 LINC01006Q8NI28 216 aa12.66□□□□□ -0.38
TRIM11-202ENST00000366699 FAM104AQ969W3 186 aa12.66□□□□□ -0.38
TRIM11-202ENST00000366699 SPANXA1Q9NS26 97 aa12.66□□□□□ -0.38
TRIM11-202ENST00000366699 ACANP16112 2415 aa12.66□□□□□ -0.38
TRIM11-202ENST00000366699 Q6ZSN1 163 aa12.65□□□□□ -0.38
TRIM11-202ENST00000366699 TRBV20-1A0A075B6N2 111 aa12.65□□□□□ -0.38
TRIM11-202ENST00000366699 SFTA2Q6UW10 78 aa12.65□□□□□ -0.38
TRIM11-202ENST00000366699 TIMM21Q9BVV7 248 aa12.65□□□□□ -0.38
TRIM11-202ENST00000366699 SCGB1A1P11684 91 aa12.64□□□□□ -0.39
TRIM11-202ENST00000366699 KRTAP1-1Q07627 177 aa12.64□□□□□ -0.39
TRIM11-202ENST00000366699 CHCHD7Q9BUK0 85 aa12.64□□□□□ -0.39
TRIM11-202ENST00000366699 IGHV3-30-3P0DP02 117 aa12.64□□□□□ -0.39
TRIM11-202ENST00000366699 A4D1N5 150 aa12.63□□□□□ -0.39
TRIM11-202ENST00000366699 CEMP1Q6PRD7 247 aaPredicted RBP12.63□□□□□ -0.39
TRIM11-202ENST00000366699 ZNF418Q8TF45 676 aaPredicted RBP12.63□□□□□ -0.39
TRIM11-202ENST00000366699 SPATA25Q9BR10 227 aa12.63□□□□□ -0.39
TRIM11-202ENST00000366699 Q9UF83 564 aa12.63□□□□□ -0.39
TRIM11-202ENST00000366699 CIDEAO60543 219 aa12.63□□□□□ -0.39
TRIM11-202ENST00000366699 UBE2D4Q9Y2X8 147 aa12.63□□□□□ -0.39
TRIM11-202ENST00000366699 INSL3P51460 131 aa12.62□□□□□ -0.39
TRIM11-202ENST00000366699 ATP6V0E2Q8NHE4 81 aa12.62□□□□□ -0.39
TRIM11-202ENST00000366699 IGHV3OR16-12A0A075B7B8 117 aa12.62□□□□□ -0.39
TRIM11-202ENST00000366699 A0A0J9YXY3 114 aa12.62□□□□□ -0.39
TRIM11-202ENST00000366699 TINCRA0A1B0GVN0 87 aa12.62□□□□□ -0.39
TRIM11-202ENST00000366699 AKAP9Q99996 3911 aa12.62□□□□□ -0.39
TRIM11-202ENST00000366699 NF1P21359 2839 aa12.62□□□□□ -0.39
TRIM11-202ENST00000366699 C1orf158Q8N1D5 194 aa12.61□□□□□ -0.39
TRIM11-202ENST00000366699 GCN1Q92616 2671 aaKnown RBP12.61□□□□□ -0.39
TRIM11-202ENST00000366699 UNC79Q9P2D8 2635 aa12.61□□□□□ -0.39
TRIM11-202ENST00000366699 A0A0B4J2C4 111 aa12.61□□□□□ -0.39
TRIM11-202ENST00000366699 IGHV1-58A0A0C4DH39 117 aa12.61□□□□□ -0.39
TRIM11-202ENST00000366699 MUSTN1Q8IVN3 82 aa12.61□□□□□ -0.39
TRIM11-202ENST00000366699 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.6□□□□□ -0.39
TRIM11-202ENST00000366699 SMCPP49901 116 aaPredicted RBP12.6□□□□□ -0.39
TRIM11-202ENST00000366699 C1QTNF4Q9BXJ3 329 aa12.6□□□□□ -0.39
TRIM11-202ENST00000366699 TCL1BO95988 128 aa12.6□□□□□ -0.39
TRIM11-202ENST00000366699 SCGB1C2P0DMR2 95 aa12.6□□□□□ -0.39
TRIM11-202ENST00000366699 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.59□□□□□ -0.39
TRIM11-202ENST00000366699 IGKV2-29A2NJV5 120 aaPredicted RBP12.59□□□□□ -0.39
TRIM11-202ENST00000366699 RNASE13Q5GAN3 156 aaKnown RBP12.59□□□□□ -0.39
TRIM11-202ENST00000366699 IL17DQ8TAD2 202 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms