RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 Q8N8P6 123 aa4.73□□□□□ -1.65
RNU1-55P-201ENST00000365510 C15orf53Q8NAA6 179 aa4.73□□□□□ -1.65
RNU1-55P-201ENST00000365510 PRSS3P2Q8NHM4 247 aa4.73□□□□□ -1.65
RNU1-55P-201ENST00000365510 PHLDA1Q8WV24 401 aaPredicted RBP4.73□□□□□ -1.65
RNU1-55P-201ENST00000365510 VSIG2Q96IQ7 327 aa4.73□□□□□ -1.65
RNU1-55P-201ENST00000365510 AP5S1Q9NUS5 200 aa4.73□□□□□ -1.65
RNU1-55P-201ENST00000365510 TMA7Q9Y2S6 64 aaKnown RBP4.73□□□□□ -1.65
RNU1-55P-201ENST00000365510 VPS13DQ5THJ4 4388 aa4.73□□□□□ -1.65
RNU1-55P-201ENST00000365510 HECTD4Q9Y4D8 3996 aa4.72□□□□□ -1.65
RNU1-55P-201ENST00000365510 IGHV3-38A0A0C4DH36 116 aa4.72□□□□□ -1.65
RNU1-55P-201ENST00000365510 TRBV27A0A0K0K1C4 114 aa4.72□□□□□ -1.65
RNU1-55P-201ENST00000365510 PRSS47A8MTI9 375 aa4.72□□□□□ -1.65
RNU1-55P-201ENST00000365510 K7EMI3 77 aa4.72□□□□□ -1.65
RNU1-55P-201ENST00000365510 NUDT3O95989 172 aa4.72□□□□□ -1.65
RNU1-55P-201ENST00000365510 IFI27P40305 119 aaPredicted RBP4.72□□□□□ -1.65
RNU1-55P-201ENST00000365510 POLR2KP53803 58 aaKnown RBP4.72□□□□□ -1.65
RNU1-55P-201ENST00000365510 COTL1Q14019 142 aa4.72□□□□□ -1.65
RNU1-55P-201ENST00000365510 ORMDL2Q53FV1 153 aa4.72□□□□□ -1.65
RNU1-55P-201ENST00000365510 TMEM97Q5BJF2 176 aa4.72□□□□□ -1.65
RNU1-55P-201ENST00000365510 NEGR1Q7Z3B1 354 aa4.72□□□□□ -1.65
RNU1-55P-201ENST00000365510 CHCHD1Q96BP2 118 aaKnown RBP4.72□□□□□ -1.65
RNU1-55P-201ENST00000365510 Q9UF83 564 aa4.72□□□□□ -1.65
RNU1-55P-201ENST00000365510 IGLV2-18A0A075B6J9 118 aa4.71□□□□□ -1.66
RNU1-55P-201ENST00000365510 IGLL5B9A064 214 aa4.71□□□□□ -1.66
RNU1-55P-201ENST00000365510 HSBP1O75506 76 aa4.71□□□□□ -1.66
RNU1-55P-201ENST00000365510 SERF1AO75920 110 aa4.71□□□□□ -1.66
RNU1-55P-201ENST00000365510 LINC00614P0C842 121 aa4.71□□□□□ -1.66
RNU1-55P-201ENST00000365510 NDUFA6P56556 154 aa4.71□□□□□ -1.66
RNU1-55P-201ENST00000365510 LAGE3Q14657 143 aa4.71□□□□□ -1.66
RNU1-55P-201ENST00000365510 ATP6V0E2Q8NHE4 81 aa4.71□□□□□ -1.66
RNU1-55P-201ENST00000365510 KRTAP4-5Q9BYR2 181 aa4.71□□□□□ -1.66
RNU1-55P-201ENST00000365510 KLK5Q9Y337 293 aaPredicted RBP4.71□□□□□ -1.66
RNU1-55P-201ENST00000365510 ABCA13Q86UQ4 5058 aa4.7□□□□□ -1.66
RNU1-55P-201ENST00000365510 TRBV25-1A0A075B6N4 114 aa4.7□□□□□ -1.66
RNU1-55P-201ENST00000365510 A0A096LPF7 62 aa4.7□□□□□ -1.66
RNU1-55P-201ENST00000365510 IGHV1-24A0A0C4DH33 117 aa4.7□□□□□ -1.66
RNU1-55P-201ENST00000365510 LINC01546A6NGU7 62 aa4.7□□□□□ -1.66
RNU1-55P-201ENST00000365510 UBE2L6O14933 153 aa4.7□□□□□ -1.66
RNU1-55P-201ENST00000365510 TSHBP01222 138 aa4.7□□□□□ -1.66
RNU1-55P-201ENST00000365510 G0S2P27469 103 aa4.7□□□□□ -1.66
RNU1-55P-201ENST00000365510 AMTP48728 403 aa4.7□□□□□ -1.66
RNU1-55P-201ENST00000365510 COA6Q5JTJ3 125 aaKnown RBP4.7□□□□□ -1.66
RNU1-55P-201ENST00000365510 CEMP1Q6PRD7 247 aaPredicted RBP4.7□□□□□ -1.66
RNU1-55P-201ENST00000365510 NIT1Q86X76 327 aa4.7□□□□□ -1.66
RNU1-55P-201ENST00000365510 GTSF1LQ9H1H1 148 aa4.7□□□□□ -1.66
RNU1-55P-201ENST00000365510 DNAH17Q9UFH2 4485 aa4.7□□□□□ -1.66
RNU1-55P-201ENST00000365510 TRBV6-8A0A0A6YYG3 113 aa4.69□□□□□ -1.66
RNU1-55P-201ENST00000365510 HBDP02042 147 aa4.69□□□□□ -1.66
RNU1-55P-201ENST00000365510 BTF3P20290 206 aaKnown RBP4.69□□□□□ -1.66
RNU1-55P-201ENST00000365510 S100A2P29034 98 aa4.69□□□□□ -1.66
RNU1-55P-201ENST00000365510 TCTAP57738 103 aa4.69□□□□□ -1.66
RNU1-55P-201ENST00000365510 TIRAPP58753 221 aa4.69□□□□□ -1.66
RNU1-55P-201ENST00000365510 LINC00310P59036 64 aa4.69□□□□□ -1.66
RNU1-55P-201ENST00000365510 TMEM18Q96B42 140 aa4.69□□□□□ -1.66
RNU1-55P-201ENST00000365510 URB1-AS1Q96HZ7 61 aa4.69□□□□□ -1.66
RNU1-55P-201ENST00000365510 TMEM243Q9BU79 118 aa4.69□□□□□ -1.66
RNU1-55P-201ENST00000365510 CYSLTR1Q9Y271 337 aa4.69□□□□□ -1.66
RNU1-55P-201ENST00000365510 DYNC1H1Q14204 4646 aaKnown RBP4.68□□□□□ -1.66
RNU1-55P-201ENST00000365510 LINC01549A6NIU2 74 aa4.68□□□□□ -1.66
RNU1-55P-201ENST00000365510 ESDP10768 282 aa4.68□□□□□ -1.66
RNU1-55P-201ENST00000365510 CCL18P55774 89 aa4.68□□□□□ -1.66
RNU1-55P-201ENST00000365510 PKIAP61925 76 aa4.68□□□□□ -1.66
RNU1-55P-201ENST00000365510 SMAGPQ0VAQ4 97 aa4.68□□□□□ -1.66
RNU1-55P-201ENST00000365510 PMCHL1Q16048 86 aa4.68□□□□□ -1.66
RNU1-55P-201ENST00000365510 LELP1Q5T871 98 aa4.68□□□□□ -1.66
RNU1-55P-201ENST00000365510 DEFB104AQ8WTQ1 72 aa4.68□□□□□ -1.66
RNU1-55P-201ENST00000365510 CHCHD5Q9BSY4 110 aa4.68□□□□□ -1.66
RNU1-55P-201ENST00000365510 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.67□□□□□ -1.66
RNU1-55P-201ENST00000365510 TRAV8-6A0A0B4J262 113 aa4.67□□□□□ -1.66
RNU1-55P-201ENST00000365510 IGKV2-29A2NJV5 120 aaPredicted RBP4.67□□□□□ -1.66
RNU1-55P-201ENST00000365510 H7C423 109 aa4.67□□□□□ -1.66
RNU1-55P-201ENST00000365510 SNRPEP62304 92 aaKnown RBP4.67□□□□□ -1.66
RNU1-55P-201ENST00000365510 PDZD11Q5EBL8 140 aa4.67□□□□□ -1.66
RNU1-55P-201ENST00000365510 AMMECR1LQ6DCA0 310 aa4.67□□□□□ -1.66
RNU1-55P-201ENST00000365510 C2orf66Q6UXQ4 117 aa4.67□□□□□ -1.66
RNU1-55P-201ENST00000365510 FAM19A2Q8N3H0 131 aa4.67□□□□□ -1.66
RNU1-55P-201ENST00000365510 C20orf203Q8NBC4 194 aa4.67□□□□□ -1.66
RNU1-55P-201ENST00000365510 TOMM6Q96B49 74 aa4.67□□□□□ -1.66
RNU1-55P-201ENST00000365510 CHCHD7Q9BUK0 85 aa4.67□□□□□ -1.66
RNU1-55P-201ENST00000365510 SPANXA1Q9NS26 97 aa4.67□□□□□ -1.66
RNU1-55P-201ENST00000365510 HSPB8Q9UJY1 196 aa4.67□□□□□ -1.66
RNU1-55P-201ENST00000365510 A0A096LNJ9 63 aa4.66□□□□□ -1.66
RNU1-55P-201ENST00000365510 C5orf52A6NGY3 159 aa4.66□□□□□ -1.66
RNU1-55P-201ENST00000365510 NUPR1O60356 82 aa4.66□□□□□ -1.66
RNU1-55P-201ENST00000365510 ATP5LO75964 103 aa4.66□□□□□ -1.66
RNU1-55P-201ENST00000365510 LEPROTL1O95214 131 aa4.66□□□□□ -1.66
RNU1-55P-201ENST00000365510 ZNF25P17030 456 aaPredicted RBP4.66□□□□□ -1.66
RNU1-55P-201ENST00000365510 LYPD5Q6UWN5 251 aa4.66□□□□□ -1.66
RNU1-55P-201ENST00000365510 NTM-AS1Q6ZSK4 140 aa4.66□□□□□ -1.66
RNU1-55P-201ENST00000365510 UBE2DNLQ8IWF7 75 aa4.66□□□□□ -1.66
RNU1-55P-201ENST00000365510 HIST3H2BBQ8N257 126 aa4.66□□□□□ -1.66
RNU1-55P-201ENST00000365510 PACRGQ96M98 296 aaPredicted RBP4.66□□□□□ -1.66
RNU1-55P-201ENST00000365510 DNAH6Q9C0G6 4158 aa4.65□□□□□ -1.66
RNU1-55P-201ENST00000365510 A0A087WX48 190 aa4.65□□□□□ -1.67
RNU1-55P-201ENST00000365510 TMEM262E9PQX1 116 aa4.65□□□□□ -1.67
RNU1-55P-201ENST00000365510 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.65□□□□□ -1.67
RNU1-55P-201ENST00000365510 M0R2N4 97 aa4.65□□□□□ -1.67
RNU1-55P-201ENST00000365510 NPSP0C0P6 89 aa4.65□□□□□ -1.67
RNU1-55P-201ENST00000365510 FGF6P10767 208 aa4.65□□□□□ -1.67
RNU1-55P-201ENST00000365510 RPL39P62891 51 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms