RNA–Protein interactions for RNA: ENST00000364065.1

RNU6-1090P-201, Transcript of RNA, U6 small nuclear 1090, pseudogene, humanhuman

BASIC

Gene RNU6-1090P, Length 94 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1090P-201ENST00000364065 UBE2D1P51668 147 aa-2.17□□□□□ -2.76
RNU6-1090P-201ENST00000364065 ATP11AUNQ6ZP68 121 aa-2.17□□□□□ -2.76
RNU6-1090P-201ENST00000364065 CALML5Q9NZT1 146 aa-2.17□□□□□ -2.76
RNU6-1090P-201ENST00000364065 NDUFA12Q9UI09 145 aa-2.17□□□□□ -2.76
RNU6-1090P-201ENST00000364065 DNAH9Q9NYC9 4486 aa-2.17□□□□□ -2.76
RNU6-1090P-201ENST00000364065 ZNF236Q9UL36 1845 aa-2.18□□□□□ -2.76
RNU6-1090P-201ENST00000364065 RPL7P18124 248 aaKnown RBP-2.18□□□□□ -2.76
RNU6-1090P-201ENST00000364065 CLLU1Q5K131 121 aa-2.18□□□□□ -2.76
RNU6-1090P-201ENST00000364065 RPL7L1Q6DKI1 246 aaKnown RBP-2.18□□□□□ -2.76
RNU6-1090P-201ENST00000364065 SMIM4Q8WVI0 70 aa-2.18□□□□□ -2.76
RNU6-1090P-201ENST00000364065 C10orf82Q8WW14 230 aa-2.18□□□□□ -2.76
RNU6-1090P-201ENST00000364065 AGPAT4-IT1Q9H0P7 198 aa-2.18□□□□□ -2.76
RNU6-1090P-201ENST00000364065 BOLA2Q9H3K6 86 aa-2.18□□□□□ -2.76
RNU6-1090P-201ENST00000364065 RPRMQ9NS64 109 aa-2.18□□□□□ -2.76
RNU6-1090P-201ENST00000364065 SYNMO15061 1565 aa-2.19□□□□□ -2.76
RNU6-1090P-201ENST00000364065 PRDM2Q13029 1718 aa-2.19□□□□□ -2.76
RNU6-1090P-201ENST00000364065 EIF3AQ14152 1382 aaKnown RBP-2.19□□□□□ -2.76
RNU6-1090P-201ENST00000364065 LRRC37A3O60309 1634 aa-2.19□□□□□ -2.76
RNU6-1090P-201ENST00000364065 SMIM24O75264 130 aa-2.19□□□□□ -2.76
RNU6-1090P-201ENST00000364065 TMEM78Q5T7P6 136 aa-2.19□□□□□ -2.76
RNU6-1090P-201ENST00000364065 CCDC115Q96NT0 180 aa-2.19□□□□□ -2.76
RNU6-1090P-201ENST00000364065 ACACAQ13085 2346 aa-2.2□□□□□ -2.76
RNU6-1090P-201ENST00000364065 A0A1W2PRE2 83 aa-2.2□□□□□ -2.76
RNU6-1090P-201ENST00000364065 LINC01545Q5VT33 79 aa-2.2□□□□□ -2.76
RNU6-1090P-201ENST00000364065 BANF2Q9H503 90 aa-2.2□□□□□ -2.76
RNU6-1090P-201ENST00000364065 SBF2Q86WG5 1849 aa-2.2□□□□□ -2.76
RNU6-1090P-201ENST00000364065 A6NIN4 97 aa-2.21□□□□□ -2.76
RNU6-1090P-201ENST00000364065 HLA-DRB4P13762 266 aa-2.21□□□□□ -2.76
RNU6-1090P-201ENST00000364065 C9orf116Q5BN46 136 aaPredicted RBP-2.21□□□□□ -2.76
RNU6-1090P-201ENST00000364065 LINC00472Q9H8W2 130 aa-2.21□□□□□ -2.76
RNU6-1090P-201ENST00000364065 HLA-DRB4X5D2U9 266 aa-2.21□□□□□ -2.76
RNU6-1090P-201ENST00000364065 IFNA17P01571 189 aa-2.22□□□□□ -2.76
RNU6-1090P-201ENST00000364065 PAEPP09466 180 aa-2.22□□□□□ -2.76
RNU6-1090P-201ENST00000364065 DEFB112Q30KQ8 113 aa-2.22□□□□□ -2.76
RNU6-1090P-201ENST00000364065 CTXND1A0A1B0GTU2 59 aa-2.23□□□□□ -2.77
RNU6-1090P-201ENST00000364065 CCL18P55774 89 aa-2.23□□□□□ -2.77
RNU6-1090P-201ENST00000364065 SPANXN1Q5VSR9 72 aa-2.23□□□□□ -2.77
RNU6-1090P-201ENST00000364065 Q6JHZ5 121 aa-2.23□□□□□ -2.77
RNU6-1090P-201ENST00000364065 CHMP6Q96FZ7 201 aa-2.23□□□□□ -2.77
RNU6-1090P-201ENST00000364065 SPRR2FQ96RM1 72 aa-2.23□□□□□ -2.77
RNU6-1090P-201ENST00000364065 HOPXQ9BPY8 73 aaPredicted RBP-2.23□□□□□ -2.77
RNU6-1090P-201ENST00000364065 LAMA1P25391 3075 aa-2.23□□□□□ -2.77
RNU6-1090P-201ENST00000364065 DPM2O94777 84 aa-2.24□□□□□ -2.77
RNU6-1090P-201ENST00000364065 MT-ND4LP03901 98 aa-2.24□□□□□ -2.77
RNU6-1090P-201ENST00000364065 DEFB123Q8N688 67 aa-2.24□□□□□ -2.77
RNU6-1090P-201ENST00000364065 MAFIPQ8WZ33 124 aa-2.24□□□□□ -2.77
RNU6-1090P-201ENST00000364065 R4GMQ9 66 aa-2.24□□□□□ -2.77
RNU6-1090P-201ENST00000364065 CUBNO60494 3623 aa-2.24□□□□□ -2.77
RNU6-1090P-201ENST00000364065 WDR87Q6ZQQ6 2873 aa-2.24□□□□□ -2.77
RNU6-1090P-201ENST00000364065 DNAH2Q9P225 4427 aa-2.24□□□□□ -2.77
RNU6-1090P-201ENST00000364065 AKAP13Q12802 2813 aa-2.25□□□□□ -2.77
RNU6-1090P-201ENST00000364065 M0R135 149 aa-2.25□□□□□ -2.77
RNU6-1090P-201ENST00000364065 PIRTP0C851 137 aa-2.25□□□□□ -2.77
RNU6-1090P-201ENST00000364065 OR9Q1Q8NGQ5 310 aa-2.25□□□□□ -2.77
RNU6-1090P-201ENST00000364065 ATPIF1Q9UII2 106 aa-2.25□□□□□ -2.77
RNU6-1090P-201ENST00000364065 LSM2Q9Y333 95 aaKnown RBP-2.25□□□□□ -2.77
RNU6-1090P-201ENST00000364065 ERCC6Q03468 1493 aa-2.26□□□□□ -2.77
RNU6-1090P-201ENST00000364065 GAPVD1Q14C86 1478 aa-2.26□□□□□ -2.77
RNU6-1090P-201ENST00000364065 UBE2G1P62253 170 aa-2.26□□□□□ -2.77
RNU6-1090P-201ENST00000364065 TMEM170BQ5T4T1 132 aa-2.26□□□□□ -2.77
RNU6-1090P-201ENST00000364065 ZNF818PQ6ZRF7 136 aa-2.26□□□□□ -2.77
RNU6-1090P-201ENST00000364065 NWD2Q9ULI1 1742 aa-2.26□□□□□ -2.77
RNU6-1090P-201ENST00000364065 OVOS2A0A0G2JMS6 1433 aa-2.26□□□□□ -2.77
RNU6-1090P-201ENST00000364065 CASKIN1Q8WXD9 1431 aa-2.26□□□□□ -2.77
RNU6-1090P-201ENST00000364065 MYH6P13533 1939 aa-2.27□□□□□ -2.77
RNU6-1090P-201ENST00000364065 PPP1R17O96001 155 aa-2.27□□□□□ -2.77
RNU6-1090P-201ENST00000364065 TRIQKQ629K1 86 aa-2.27□□□□□ -2.77
RNU6-1090P-201ENST00000364065 OR8I2Q8N0Y5 310 aa-2.27□□□□□ -2.77
RNU6-1090P-201ENST00000364065 SPTSSBQ8NFR3 76 aa-2.27□□□□□ -2.77
RNU6-1090P-201ENST00000364065 VSTM2AQ8TAG5 236 aa-2.27□□□□□ -2.77
RNU6-1090P-201ENST00000364065 LINC00312Q9Y6C7 94 aa-2.27□□□□□ -2.77
RNU6-1090P-201ENST00000364065 TMEM244Q5VVB8 128 aa-2.28□□□□□ -2.77
RNU6-1090P-201ENST00000364065 TMEM35BQ8NCS4 154 aa-2.28□□□□□ -2.77
RNU6-1090P-201ENST00000364065 GID8Q9NWU2 228 aa-2.28□□□□□ -2.77
RNU6-1090P-201ENST00000364065 NSD3Q9BZ95 1437 aa-2.28□□□□□ -2.77
RNU6-1090P-201ENST00000364065 SYS1-DBNDD2H3BUS1 97 aa-2.29□□□□□ -2.78
RNU6-1090P-201ENST00000364065 MAGOHBQ96A72 148 aaKnown RBP-2.29□□□□□ -2.78
RNU6-1090P-201ENST00000364065 ROCK1Q13464 1354 aa-2.29□□□□□ -2.78
RNU6-1090P-201ENST00000364065 PLECQ15149 4684 aaKnown RBP-2.3□□□□□ -2.78
RNU6-1090P-201ENST00000364065 ZZEF1O43149 2961 aa-2.3□□□□□ -2.78
RNU6-1090P-201ENST00000364065 DNHD1Q96M86 4753 aa-2.3□□□□□ -2.78
RNU6-1090P-201ENST00000364065 COX17Q14061 63 aa-2.3□□□□□ -2.78
RNU6-1090P-201ENST00000364065 MNS1Q8NEH6 495 aa-2.3□□□□□ -2.78
RNU6-1090P-201ENST00000364065 VPS13BQ7Z7G8 4022 aa-2.31□□□□□ -2.78
RNU6-1090P-201ENST00000364065 NCR2O95944 276 aa-2.31□□□□□ -2.78
RNU6-1090P-201ENST00000364065 PPP1R2P3Q6NXS1 205 aa-2.31□□□□□ -2.78
RNU6-1090P-201ENST00000364065 CDK5RAP2Q96SN8 1893 aa-2.31□□□□□ -2.78
RNU6-1090P-201ENST00000364065 DOCK2Q92608 1830 aa-2.31□□□□□ -2.78
RNU6-1090P-201ENST00000364065 MRC1P22897 1456 aa-2.32□□□□□ -2.78
RNU6-1090P-201ENST00000364065 PITX3O75364 302 aa-2.32□□□□□ -2.78
RNU6-1090P-201ENST00000364065 MIC13Q5XKP0 118 aa-2.32□□□□□ -2.78
RNU6-1090P-201ENST00000364065 APLNQ9ULZ1 77 aa-2.32□□□□□ -2.78
RNU6-1090P-201ENST00000364065 POLA1P09884 1462 aaPredicted RBP-2.33□□□□□ -2.78
RNU6-1090P-201ENST00000364065 KIF21AQ7Z4S6 1674 aa-2.33□□□□□ -2.78
RNU6-1090P-201ENST00000364065 SAMD13Q5VXD3 122 aa-2.33□□□□□ -2.78
RNU6-1090P-201ENST00000364065 CTAGE3PQ8IX95 158 aa-2.33□□□□□ -2.78
RNU6-1090P-201ENST00000364065 LYSTQ99698 3801 aa-2.33□□□□□ -2.78
RNU6-1090P-201ENST00000364065 DAPK1P53355 1430 aa-2.34□□□□□ -2.78
RNU6-1090P-201ENST00000364065 IFNGP01579 166 aa-2.34□□□□□ -2.78
RNU6-1090P-201ENST00000364065 COX8AP10176 69 aa-2.34□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms