RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 DMDP11532 3685 aa-2.81□□□□□ -2.86
RNU6-238P-201ENST00000363313 TECPR2O15040 1411 aa-2.82□□□□□ -2.86
RNU6-238P-201ENST00000363313 MYOM3Q5VTT5 1437 aa-2.82□□□□□ -2.86
RNU6-238P-201ENST00000363313 MAP3K5Q99683 1374 aa-2.82□□□□□ -2.86
RNU6-238P-201ENST00000363313 PNMA8CA0A1B0GUJ8 204 aa-2.82□□□□□ -2.86
RNU6-238P-201ENST00000363313 TMEM114B3SHH9 223 aa-2.82□□□□□ -2.86
RNU6-238P-201ENST00000363313 APOA2P02652 100 aa-2.82□□□□□ -2.86
RNU6-238P-201ENST00000363313 CYBAP13498 195 aa-2.82□□□□□ -2.86
RNU6-238P-201ENST00000363313 HSPE1P61604 102 aaKnown RBP-2.82□□□□□ -2.86
RNU6-238P-201ENST00000363313 LSM3P62310 102 aaKnown RBP-2.82□□□□□ -2.86
RNU6-238P-201ENST00000363313 PLGLB1Q02325 96 aa-2.82□□□□□ -2.86
RNU6-238P-201ENST00000363313 NUP35Q8NFH5 326 aa-2.82□□□□□ -2.86
RNU6-238P-201ENST00000363313 BORCS8Q96FH0 119 aa-2.82□□□□□ -2.86
RNU6-238P-201ENST00000363313 PHB2Q99623 299 aa-2.82□□□□□ -2.86
RNU6-238P-201ENST00000363313 MYH2Q9UKX2 1941 aa-2.82□□□□□ -2.86
RNU6-238P-201ENST00000363313 FREM2Q5SZK8 3169 aa-2.82□□□□□ -2.86
RNU6-238P-201ENST00000363313 CICQ96RK0 1608 aaPredicted RBP-2.82□□□□□ -2.86
RNU6-238P-201ENST00000363313 PDE4DIPQ5VU43 2346 aa-2.83□□□□□ -2.86
RNU6-238P-201ENST00000363313 CCDC179H3BU77 68 aa-2.83□□□□□ -2.86
RNU6-238P-201ENST00000363313 M0R135 149 aa-2.83□□□□□ -2.86
RNU6-238P-201ENST00000363313 HBDP02042 147 aa-2.83□□□□□ -2.86
RNU6-238P-201ENST00000363313 PIRTP0C851 137 aa-2.83□□□□□ -2.86
RNU6-238P-201ENST00000363313 PIPP12273 146 aaPredicted RBP-2.83□□□□□ -2.86
RNU6-238P-201ENST00000363313 PCBD1P61457 104 aa-2.83□□□□□ -2.86
RNU6-238P-201ENST00000363313 TMEM170BQ5T4T1 132 aa-2.83□□□□□ -2.86
RNU6-238P-201ENST00000363313 FAM9CQ8IZT9 166 aa-2.83□□□□□ -2.86
RNU6-238P-201ENST00000363313 CNPY4Q8N129 248 aa-2.83□□□□□ -2.86
RNU6-238P-201ENST00000363313 ARHGEF12Q9NZN5 1544 aa-2.83□□□□□ -2.86
RNU6-238P-201ENST00000363313 MED23Q9ULK4 1368 aa-2.84□□□□□ -2.86
RNU6-238P-201ENST00000363313 LINC00959A0A1B0GUT2 108 aa-2.84□□□□□ -2.86
RNU6-238P-201ENST00000363313 PPP5D1E7EU14 171 aa-2.84□□□□□ -2.86
RNU6-238P-201ENST00000363313 F8VRH5 84 aa-2.84□□□□□ -2.86
RNU6-238P-201ENST00000363313 CRYGSP22914 178 aa-2.84□□□□□ -2.86
RNU6-238P-201ENST00000363313 CRYBA4P53673 196 aa-2.84□□□□□ -2.86
RNU6-238P-201ENST00000363313 ALX1Q15699 326 aa-2.84□□□□□ -2.86
RNU6-238P-201ENST00000363313 TRAV13-1A0A0B4J241 112 aa-2.85□□□□□ -2.87
RNU6-238P-201ENST00000363313 CTXND1A0A1B0GTU2 59 aa-2.85□□□□□ -2.87
RNU6-238P-201ENST00000363313 SDC2P34741 201 aa-2.85□□□□□ -2.87
RNU6-238P-201ENST00000363313 SRP9P49458 86 aaKnown RBP-2.85□□□□□ -2.87
RNU6-238P-201ENST00000363313 GNG5P63218 68 aa-2.85□□□□□ -2.87
RNU6-238P-201ENST00000363313 COTL1Q14019 142 aa-2.85□□□□□ -2.87
RNU6-238P-201ENST00000363313 HSD17B12Q53GQ0 312 aa-2.85□□□□□ -2.87
RNU6-238P-201ENST00000363313 HRCT1Q6UXD1 115 aa-2.85□□□□□ -2.87
RNU6-238P-201ENST00000363313 LINC00305Q7Z4B0 112 aa-2.85□□□□□ -2.87
RNU6-238P-201ENST00000363313 CTNNBIP1Q9NSA3 81 aaPredicted RBP-2.85□□□□□ -2.87
RNU6-238P-201ENST00000363313 UFC1Q9Y3C8 167 aa-2.85□□□□□ -2.87
RNU6-238P-201ENST00000363313 SETBP1Q9Y6X0 1596 aa-2.86□□□□□ -2.87
RNU6-238P-201ENST00000363313 H3BMG7 143 aa-2.86□□□□□ -2.87
RNU6-238P-201ENST00000363313 H7C1C5 153 aa-2.86□□□□□ -2.87
RNU6-238P-201ENST00000363313 SSSCA1O60232 199 aa-2.86□□□□□ -2.87
RNU6-238P-201ENST00000363313 LCN6P62502 163 aa-2.86□□□□□ -2.87
RNU6-238P-201ENST00000363313 TMED2Q15363 201 aa-2.86□□□□□ -2.87
RNU6-238P-201ENST00000363313 CROCCP2Q86T23 111 aa-2.86□□□□□ -2.87
RNU6-238P-201ENST00000363313 SNX29P2Q8IUI4 249 aa-2.86□□□□□ -2.87
RNU6-238P-201ENST00000363313 VSTM2AQ8TAG5 236 aa-2.86□□□□□ -2.87
RNU6-238P-201ENST00000363313 NMNAT1Q9HAN9 279 aaPredicted RBP-2.86□□□□□ -2.87
RNU6-238P-201ENST00000363313 METTL1Q9UBP6 276 aaKnown RBP-2.86□□□□□ -2.87
RNU6-238P-201ENST00000363313 PRNDQ9UKY0 176 aa-2.86□□□□□ -2.87
RNU6-238P-201ENST00000363313 ERICH2A1L162 156 aa-2.87□□□□□ -2.87
RNU6-238P-201ENST00000363313 G3V2T6 193 aa-2.87□□□□□ -2.87
RNU6-238P-201ENST00000363313 GABARAPH6UMI1 98 aa-2.87□□□□□ -2.87
RNU6-238P-201ENST00000363313 CSN2P05814 226 aa-2.87□□□□□ -2.87
RNU6-238P-201ENST00000363313 S100A6P06703 90 aa-2.87□□□□□ -2.87
RNU6-238P-201ENST00000363313 COX17Q14061 63 aa-2.87□□□□□ -2.87
RNU6-238P-201ENST00000363313 C10orf82Q8WW14 230 aa-2.87□□□□□ -2.87
RNU6-238P-201ENST00000363313 BTF3L4Q96K17 158 aa-2.87□□□□□ -2.87
RNU6-238P-201ENST00000363313 FAM32AQ9Y421 112 aaKnown RBP-2.87□□□□□ -2.87
RNU6-238P-201ENST00000363313 R4GMQ9 66 aa-2.87□□□□□ -2.87
RNU6-238P-201ENST00000363313 KIF21AQ7Z4S6 1674 aa-2.88□□□□□ -2.87
RNU6-238P-201ENST00000363313 UHRF1BP1LA0JNW5 1464 aa-2.88□□□□□ -2.87
RNU6-238P-201ENST00000363313 TRDV1A0A1B0GX56 115 aa-2.88□□□□□ -2.87
RNU6-238P-201ENST00000363313 TPM1P09493 284 aa-2.88□□□□□ -2.87
RNU6-238P-201ENST00000363313 S4R3F8 94 aa-2.88□□□□□ -2.87
RNU6-238P-201ENST00000363313 MAP3K1Q13233 1512 aa-2.88□□□□□ -2.87
RNU6-238P-201ENST00000363313 ARPC5O15511 151 aa-2.89□□□□□ -2.87
RNU6-238P-201ENST00000363313 MT1EP04732 61 aa-2.89□□□□□ -2.87
RNU6-238P-201ENST00000363313 PPP1R2P41236 205 aa-2.89□□□□□ -2.87
RNU6-238P-201ENST00000363313 DEFB110Q30KQ9 67 aa-2.89□□□□□ -2.87
RNU6-238P-201ENST00000363313 LIN52Q52LA3 116 aa-2.89□□□□□ -2.87
RNU6-238P-201ENST00000363313 MT1MQ8N339 61 aa-2.89□□□□□ -2.87
RNU6-238P-201ENST00000363313 SLC35B3Q9H1N7 401 aa-2.89□□□□□ -2.87
RNU6-238P-201ENST00000363313 NDUFA4L2Q9NRX3 87 aa-2.89□□□□□ -2.87
RNU6-238P-201ENST00000363313 SSR3Q9UNL2 185 aa-2.89□□□□□ -2.87
RNU6-238P-201ENST00000363313 NOP16Q9Y3C1 178 aaKnown RBP-2.89□□□□□ -2.87
RNU6-238P-201ENST00000363313 SPTAN1Q13813 2472 aaKnown RBP-2.9□□□□□ -2.87
RNU6-238P-201ENST00000363313 PXDNQ92626 1479 aa-2.9□□□□□ -2.87
RNU6-238P-201ENST00000363313 TRBV7-6A0A0J9YX20 115 aa-2.9□□□□□ -2.87
RNU6-238P-201ENST00000363313 UQCRQO14949 82 aa-2.9□□□□□ -2.87
RNU6-238P-201ENST00000363313 SLC25A5P05141 298 aaKnown RBP-2.9□□□□□ -2.87
RNU6-238P-201ENST00000363313 PTMSP20962 102 aa-2.9□□□□□ -2.87
RNU6-238P-201ENST00000363313 MAGOHP61326 146 aaKnown RBP-2.9□□□□□ -2.87
RNU6-238P-201ENST00000363313 LTC4SQ16873 150 aa-2.9□□□□□ -2.87
RNU6-238P-201ENST00000363313 Q8N8P6 123 aa-2.9□□□□□ -2.87
RNU6-238P-201ENST00000363313 ATP6V0E2Q8NHE4 81 aa-2.9□□□□□ -2.87
RNU6-238P-201ENST00000363313 SH3BGRL3Q9H299 93 aa-2.9□□□□□ -2.87
RNU6-238P-201ENST00000363313 LYRM2Q9NU23 88 aaPredicted RBP-2.9□□□□□ -2.87
RNU6-238P-201ENST00000363313 NKTRP30414 1462 aaKnown RBP-2.9□□□□□ -2.87
RNU6-238P-201ENST00000363313 MARF1Q9Y4F3 1742 aaKnown RBP-2.9□□□□□ -2.87
RNU6-238P-201ENST00000363313 HSBP1L1C9JCN9 74 aa-2.91□□□□□ -2.88
RNU6-238P-201ENST00000363313 CETN3O15182 167 aa-2.91□□□□□ -2.88
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms