RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 RHPN1-AS1Q9BWJ2 59 aa9.5□□□□□ -0.89
VAMP1-201ENST00000361716 IGHV3-30-3P0DP02 117 aa9.5□□□□□ -0.89
VAMP1-201ENST00000361716 EDN2P20800 178 aa9.5□□□□□ -0.89
VAMP1-201ENST00000361716 ADAMTSL4-AS1Q5T5F5 129 aa9.5□□□□□ -0.89
VAMP1-201ENST00000361716 ZFAND3Q9H8U3 227 aa9.5□□□□□ -0.89
VAMP1-201ENST00000361716 MDFICQ9P1T7 246 aa9.5□□□□□ -0.89
VAMP1-201ENST00000361716 hADV29S1A0JD25 119 aa9.49□□□□□ -0.89
VAMP1-201ENST00000361716 M0R1W7 72 aa9.49□□□□□ -0.89
VAMP1-201ENST00000361716 NDUFA7O95182 113 aa9.49□□□□□ -0.89
VAMP1-201ENST00000361716 RHOHQ15669 191 aa9.49□□□□□ -0.89
VAMP1-201ENST00000361716 MTORP42345 2549 aa9.49□□□□□ -0.89
VAMP1-201ENST00000361716 C9orf47Q6ZRZ4 202 aa9.49□□□□□ -0.89
VAMP1-201ENST00000361716 FAM19A5Q7Z5A7 132 aaPredicted RBP9.49□□□□□ -0.89
VAMP1-201ENST00000361716 ZFAND2AQ8N6M9 145 aa9.49□□□□□ -0.89
VAMP1-201ENST00000361716 BLCAPP62952 87 aa9.48□□□□□ -0.89
VAMP1-201ENST00000361716 TMEM223A0PJW6 202 aa9.48□□□□□ -0.89
VAMP1-201ENST00000361716 RNASE3P12724 160 aaKnown RBP9.48□□□□□ -0.89
VAMP1-201ENST00000361716 HOXD3P31249 432 aaPredicted RBP9.48□□□□□ -0.89
VAMP1-201ENST00000361716 RNF223E7ERA6 249 aa9.47□□□□□ -0.89
VAMP1-201ENST00000361716 H3BUX3 64 aa9.47□□□□□ -0.89
VAMP1-201ENST00000361716 HELZ2Q9BYK8 2649 aaKnown RBP9.47□□□□□ -0.89
VAMP1-201ENST00000361716 IGHV1-69DA0A0B4J2H0 117 aa9.47□□□□□ -0.89
VAMP1-201ENST00000361716 SPINK13Q1W4C9 94 aa9.47□□□□□ -0.89
VAMP1-201ENST00000361716 C3orf22Q8N5N4 141 aa9.47□□□□□ -0.89
VAMP1-201ENST00000361716 AMELXQ99217 191 aa9.47□□□□□ -0.89
VAMP1-201ENST00000361716 MUC4Q99102 2169 aa9.47□□□□□ -0.89
VAMP1-201ENST00000361716 IGHV3OR16-12A0A075B7B8 117 aa9.47□□□□□ -0.89
VAMP1-201ENST00000361716 TRBV30A0A0K0K1B3 111 aa9.47□□□□□ -0.89
VAMP1-201ENST00000361716 ZFHX3Q15911 3703 aa9.46□□□□□ -0.89
VAMP1-201ENST00000361716 IGHV4-4A0A075B6R2 117 aa9.46□□□□□ -0.89
VAMP1-201ENST00000361716 IGKV3D-7A0A0C4DH55 119 aa9.46□□□□□ -0.89
VAMP1-201ENST00000361716 PRM2P04554 102 aa9.46□□□□□ -0.89
VAMP1-201ENST00000361716 C9orf139Q6ZV77 190 aa9.46□□□□□ -0.89
VAMP1-201ENST00000361716 NXPH4O95158 308 aa9.46□□□□□ -0.9
VAMP1-201ENST00000361716 LY6G5BQ8NDX9 201 aa9.46□□□□□ -0.9
VAMP1-201ENST00000361716 TIMM17AQ99595 171 aa9.46□□□□□ -0.9
VAMP1-201ENST00000361716 SMIM9A6NGZ8 99 aa9.46□□□□□ -0.9
VAMP1-201ENST00000361716 H3BT86 120 aa9.46□□□□□ -0.9
VAMP1-201ENST00000361716 C5orf47Q569G3 176 aa9.46□□□□□ -0.9
VAMP1-201ENST00000361716 HIST2H2BDQ6DRA6 164 aa9.46□□□□□ -0.9
VAMP1-201ENST00000361716 HECTD1Q9ULT8 2610 aa9.45□□□□□ -0.9
VAMP1-201ENST00000361716 ZANQ9Y493 2812 aa9.45□□□□□ -0.9
VAMP1-201ENST00000361716 ODF3BA8MYP8 253 aa9.45□□□□□ -0.9
VAMP1-201ENST00000361716 J3KT08 172 aa9.45□□□□□ -0.9
VAMP1-201ENST00000361716 TRBV7-1A0A0A6YYK4 115 aa9.45□□□□□ -0.9
VAMP1-201ENST00000361716 MINOS1Q5TGZ0 78 aa9.45□□□□□ -0.9
VAMP1-201ENST00000361716 NRGNQ92686 78 aa9.45□□□□□ -0.9
VAMP1-201ENST00000361716 DNAJC30Q96LL9 226 aa9.45□□□□□ -0.9
VAMP1-201ENST00000361716 MINOS1-NBL1R4GNA1 71 aa9.45□□□□□ -0.9
VAMP1-201ENST00000361716 SDIM1Q6ZPB5 146 aa9.44□□□□□ -0.9
VAMP1-201ENST00000361716 MAPK1IP1LQ8NDC0 245 aa9.44□□□□□ -0.9
VAMP1-201ENST00000361716 Q9HAA7 133 aa9.44□□□□□ -0.9
VAMP1-201ENST00000361716 POLR2KP53803 58 aaKnown RBP9.44□□□□□ -0.9
VAMP1-201ENST00000361716 IGHV3-38A0A0C4DH36 116 aa9.44□□□□□ -0.9
VAMP1-201ENST00000361716 GNLYP22749 145 aa9.43□□□□□ -0.9
VAMP1-201ENST00000361716 DGAT2L7PQ6IED9 249 aa9.43□□□□□ -0.9
VAMP1-201ENST00000361716 SPANXA1Q9NS26 97 aa9.43□□□□□ -0.9
VAMP1-201ENST00000361716 HIVEP2P31629 2446 aa9.43□□□□□ -0.9
VAMP1-201ENST00000361716 DAZ2Q13117 558 aaKnown RBP9.43□□□□□ -0.9
VAMP1-201ENST00000361716 DAZ4Q86SG3 579 aaKnown RBP9.43□□□□□ -0.9
VAMP1-201ENST00000361716 DAZ1Q9NQZ3 744 aaKnown RBP9.43□□□□□ -0.9
VAMP1-201ENST00000361716 DAZ3Q9NR90 486 aaKnown RBP9.43□□□□□ -0.9
VAMP1-201ENST00000361716 DOPEY1Q5JWR5 2465 aa9.43□□□□□ -0.9
VAMP1-201ENST00000361716 A0A1W2PPR1 153 aa9.43□□□□□ -0.9
VAMP1-201ENST00000361716 OVOL1O14753 267 aa9.43□□□□□ -0.9
VAMP1-201ENST00000361716 UQCRQO14949 82 aa9.43□□□□□ -0.9
VAMP1-201ENST00000361716 LST1O00453 97 aa9.42□□□□□ -0.9
VAMP1-201ENST00000361716 BAALC-AS2P0C853 105 aa9.42□□□□□ -0.9
VAMP1-201ENST00000361716 OR13C6PQ8NH95 151 aa9.42□□□□□ -0.9
VAMP1-201ENST00000361716 SMCR5Q8TEV8 140 aa9.42□□□□□ -0.9
VAMP1-201ENST00000361716 DSCR8Q96T75 97 aa9.42□□□□□ -0.9
VAMP1-201ENST00000361716 IGHV3-16A0A0C4DH30 117 aa9.42□□□□□ -0.9
VAMP1-201ENST00000361716 KIR2DL5BQ8NHK3 375 aa9.42□□□□□ -0.9
VAMP1-201ENST00000361716 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.41□□□□□ -0.9
VAMP1-201ENST00000361716 IGKV3OR2-268A0A0C4DH90 116 aa9.41□□□□□ -0.9
VAMP1-201ENST00000361716 IGKV2-29A2NJV5 120 aaPredicted RBP9.41□□□□□ -0.9
VAMP1-201ENST00000361716 IGLV4-3A0A075B6K6 122 aa9.41□□□□□ -0.9
VAMP1-201ENST00000361716 IGHV4-38-2P0DP08 117 aa9.41□□□□□ -0.9
VAMP1-201ENST00000361716 SYNJ2BPP57105 145 aa9.41□□□□□ -0.9
VAMP1-201ENST00000361716 MOB4Q9Y3A3 225 aa9.41□□□□□ -0.9
VAMP1-201ENST00000361716 A0A1B0GX51 115 aa9.41□□□□□ -0.9
VAMP1-201ENST00000361716 ADORA2A-AS1P86434 159 aa9.41□□□□□ -0.9
VAMP1-201ENST00000361716 TRACP01848 142 aa9.4□□□□□ -0.9
VAMP1-201ENST00000361716 UCNP55089 124 aa9.4□□□□□ -0.9
VAMP1-201ENST00000361716 HIST1H4AP62805 103 aaKnown RBP9.4□□□□□ -0.9
VAMP1-201ENST00000361716 C10orf99Q6UWK7 81 aa9.4□□□□□ -0.9
VAMP1-201ENST00000361716 PROK1P58294 105 aa9.4□□□□□ -0.9
VAMP1-201ENST00000361716 RNF152Q8N8N0 203 aa9.4□□□□□ -0.9
VAMP1-201ENST00000361716 POM121L12Q8N7R1 296 aa9.4□□□□□ -0.91
VAMP1-201ENST00000361716 C5orf56Q8N8D9 126 aa9.4□□□□□ -0.91
VAMP1-201ENST00000361716 C20orf203Q8NBC4 194 aa9.4□□□□□ -0.91
VAMP1-201ENST00000361716 ACANP16112 2415 aa9.39□□□□□ -0.91
VAMP1-201ENST00000361716 A0A087WVE0 104 aa9.39□□□□□ -0.91
VAMP1-201ENST00000361716 CIRBPQ14011 172 aaKnown RBP9.39□□□□□ -0.91
VAMP1-201ENST00000361716 SIRPDQ9H106 197 aa9.39□□□□□ -0.91
VAMP1-201ENST00000361716 DNAL4O96015 105 aa9.39□□□□□ -0.91
VAMP1-201ENST00000361716 MIAQ16674 131 aa9.39□□□□□ -0.91
VAMP1-201ENST00000361716 HRCT1Q6UXD1 115 aa9.39□□□□□ -0.91
VAMP1-201ENST00000361716 TMEM61Q8N0U2 210 aa9.39□□□□□ -0.91
VAMP1-201ENST00000361716 Q8N6K4 173 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms