RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 PIGBOS1A0A0B4J2F0 54 aa0.57□□□□□ -2.32
RPL39-201ENST00000361575 OOSP1A8MZH6 123 aa0.57□□□□□ -2.32
RPL39-201ENST00000361575 APOC2P02655 101 aa0.57□□□□□ -2.32
RPL39-201ENST00000361575 Q5VV11 94 aa0.57□□□□□ -2.32
RPL39-201ENST00000361575 CACNA1CQ13936 2221 aa0.56□□□□□ -2.32
RPL39-201ENST00000361575 PPP1R17O96001 155 aa0.56□□□□□ -2.32
RPL39-201ENST00000361575 GCHFRP30047 84 aa0.56□□□□□ -2.32
RPL39-201ENST00000361575 TTC9CQ8N5M4 171 aa0.56□□□□□ -2.32
RPL39-201ENST00000361575 PPP3R2Q96LZ3 170 aa0.56□□□□□ -2.32
RPL39-201ENST00000361575 CPSF1Q10570 1443 aaKnown RBP0.55□□□□□ -2.32
RPL39-201ENST00000361575 MRC1P22897 1456 aa0.55□□□□□ -2.32
RPL39-201ENST00000361575 ZNF236Q9UL36 1845 aa0.55□□□□□ -2.32
RPL39-201ENST00000361575 BAGE3Q86Y29 109 aa0.55□□□□□ -2.32
RPL39-201ENST00000361575 AQP10Q96PS8 301 aa0.55□□□□□ -2.32
RPL39-201ENST00000361575 SPANXDQ9BXN6 97 aa0.55□□□□□ -2.32
RPL39-201ENST00000361575 PPIP5K1Q6PFW1 1433 aa0.55□□□□□ -2.32
RPL39-201ENST00000361575 UNC13BO14795 1591 aa0.54□□□□□ -2.32
RPL39-201ENST00000361575 CHD9Q3L8U1 2897 aa0.54□□□□□ -2.32
RPL39-201ENST00000361575 TSLPQ969D9 159 aa0.54□□□□□ -2.32
RPL39-201ENST00000361575 PSME4Q14997 1843 aa0.54□□□□□ -2.32
RPL39-201ENST00000361575 NCOA3Q9Y6Q9 1424 aa0.54□□□□□ -2.32
RPL39-201ENST00000361575 SHROOM2Q13796 1616 aa0.53□□□□□ -2.32
RPL39-201ENST00000361575 PHGR1C9JFL3 82 aa0.53□□□□□ -2.32
RPL39-201ENST00000361575 TNFP01375 233 aa0.53□□□□□ -2.32
RPL39-201ENST00000361575 SPINK6Q6UWN8 80 aa0.53□□□□□ -2.32
RPL39-201ENST00000361575 LINC00474Q9P2X8 69 aa0.53□□□□□ -2.32
RPL39-201ENST00000361575 OTOGQ6ZRI0 2925 aa0.53□□□□□ -2.32
RPL39-201ENST00000361575 IGF2RP11717 2491 aa0.53□□□□□ -2.33
RPL39-201ENST00000361575 AHNAKQ09666 5890 aaKnown RBP0.52□□□□□ -2.33
RPL39-201ENST00000361575 CORTO00230 105 aa0.52□□□□□ -2.33
RPL39-201ENST00000361575 MRPL54Q6P161 138 aaKnown RBP0.52□□□□□ -2.33
RPL39-201ENST00000361575 C5orf38Q86SI9 138 aa0.52□□□□□ -2.33
RPL39-201ENST00000361575 MYOM2P54296 1465 aa0.52□□□□□ -2.33
RPL39-201ENST00000361575 F6UZH7 168 aa0.51□□□□□ -2.33
RPL39-201ENST00000361575 M0R135 149 aa0.51□□□□□ -2.33
RPL39-201ENST00000361575 PLXNB2O15031 1838 aa0.51□□□□□ -2.33
RPL39-201ENST00000361575 SNAPC5O75971 98 aa0.51□□□□□ -2.33
RPL39-201ENST00000361575 ZFYVE26Q68DK2 2539 aa0.51□□□□□ -2.33
RPL39-201ENST00000361575 C8orf59Q8N0T1 100 aaPredicted RBP0.51□□□□□ -2.33
RPL39-201ENST00000361575 LENEPQ9Y5L5 61 aa0.51□□□□□ -2.33
RPL39-201ENST00000361575 SYNE1Q8NF91 8797 aaKnown RBP0.51□□□□□ -2.33
RPL39-201ENST00000361575 SPAG11BQ08648 103 aa0.5□□□□□ -2.33
RPL39-201ENST00000361575 C9orf153Q5TBE3 101 aa0.5□□□□□ -2.33
RPL39-201ENST00000361575 CFAP126Q5VTH2 177 aa0.5□□□□□ -2.33
RPL39-201ENST00000361575 SPAG11AQ6PDA7 123 aa0.5□□□□□ -2.33
RPL39-201ENST00000361575 CYP4F30PQ9H0H9 118 aa0.5□□□□□ -2.33
RPL39-201ENST00000361575 FAT4Q6V0I7 4981 aa0.49□□□□□ -2.33
RPL39-201ENST00000361575 SMG6Q86US8 1419 aaKnown RBP0.49□□□□□ -2.33
RPL39-201ENST00000361575 KTN1Q86UP2 1357 aaKnown RBP0.49□□□□□ -2.33
RPL39-201ENST00000361575 MAST4O15021 2626 aa0.49□□□□□ -2.33
RPL39-201ENST00000361575 IFNGP01579 166 aa0.49□□□□□ -2.33
RPL39-201ENST00000361575 TPPP2P59282 170 aa0.49□□□□□ -2.33
RPL39-201ENST00000361575 SSBP3-AS1Q7Z2R9 100 aa0.49□□□□□ -2.33
RPL39-201ENST00000361575 COMMD6Q7Z4G1 85 aa0.49□□□□□ -2.33
RPL39-201ENST00000361575 NDUFA4L2Q9NRX3 87 aa0.49□□□□□ -2.33
RPL39-201ENST00000361575 R4GMQ9 66 aa0.49□□□□□ -2.33
RPL39-201ENST00000361575 FAM208BQ5VWN6 2430 aa0.49□□□□□ -2.33
RPL39-201ENST00000361575 TRBV7-3A0A075B6L6 115 aa0.48□□□□□ -2.33
RPL39-201ENST00000361575 COX6A2Q02221 97 aa0.48□□□□□ -2.33
RPL39-201ENST00000361575 IER3IP1Q9Y5U9 82 aa0.48□□□□□ -2.33
RPL39-201ENST00000361575 SMIM6P0DI80 62 aa0.47□□□□□ -2.33
RPL39-201ENST00000361575 AMELXQ99217 191 aa0.47□□□□□ -2.33
RPL39-201ENST00000361575 AHNAK2Q8IVF2 5795 aa0.46□□□□□ -2.34
RPL39-201ENST00000361575 WNK3Q9BYP7 1800 aa0.46□□□□□ -2.34
RPL39-201ENST00000361575 PTPRZ1P23471 2315 aaPredicted RBP0.46□□□□□ -2.34
RPL39-201ENST00000361575 ZNF815PA8K554 130 aa0.46□□□□□ -2.34
RPL39-201ENST00000361575 PIN1P1O15428 100 aa0.46□□□□□ -2.34
RPL39-201ENST00000361575 SSSCA1O60232 199 aa0.46□□□□□ -2.34
RPL39-201ENST00000361575 UBE2DNLQ8IWF7 75 aa0.46□□□□□ -2.34
RPL39-201ENST00000361575 DPH3P1Q9H4G8 78 aa0.46□□□□□ -2.34
RPL39-201ENST00000361575 GNG8Q9UK08 70 aa0.46□□□□□ -2.34
RPL39-201ENST00000361575 EIF4G3O43432 1585 aaKnown RBP0.45□□□□□ -2.34
RPL39-201ENST00000361575 S100A1P23297 94 aa0.45□□□□□ -2.34
RPL39-201ENST00000361575 GNG4P50150 75 aa0.45□□□□□ -2.34
RPL39-201ENST00000361575 TMEM203Q969S6 136 aa0.45□□□□□ -2.34
RPL39-201ENST00000361575 V9GYH0 126 aa0.45□□□□□ -2.34
RPL39-201ENST00000361575 WDR7Q9Y4E6 1490 aa0.45□□□□□ -2.34
RPL39-201ENST00000361575 AHCTF1Q8WYP5 2266 aa0.45□□□□□ -2.34
RPL39-201ENST00000361575 KDM3BQ7LBC6 1761 aa0.45□□□□□ -2.34
RPL39-201ENST00000361575 ZNF292O60281 2723 aa0.44□□□□□ -2.34
RPL39-201ENST00000361575 TCHHQ07283 1943 aa0.44□□□□□ -2.34
RPL39-201ENST00000361575 PPP3R1P63098 170 aa0.44□□□□□ -2.34
RPL39-201ENST00000361575 MGST2Q99735 147 aa0.44□□□□□ -2.34
RPL39-201ENST00000361575 PEG3Q9GZU2 1588 aa0.44□□□□□ -2.34
RPL39-201ENST00000361575 CTXND1A0A1B0GTU2 59 aa0.43□□□□□ -2.34
RPL39-201ENST00000361575 LINC00472Q9H8W2 130 aa0.43□□□□□ -2.34
RPL39-201ENST00000361575 RIMS1Q86UR5 1692 aaKnown RBP0.43□□□□□ -2.34
RPL39-201ENST00000361575 LAMC1P11047 1609 aa0.42□□□□□ -2.34
RPL39-201ENST00000361575 PZPP20742 1482 aa0.42□□□□□ -2.34
RPL39-201ENST00000361575 LRP1Q07954 4544 aaKnown RBP0.42□□□□□ -2.34
RPL39-201ENST00000361575 UBE2L5PA0A1B0GUS4 154 aa0.42□□□□□ -2.34
RPL39-201ENST00000361575 UBE2L3P68036 154 aaKnown RBP0.42□□□□□ -2.34
RPL39-201ENST00000361575 DYNLRB1Q9NP97 96 aa0.42□□□□□ -2.34
RPL39-201ENST00000361575 KIF21AQ7Z4S6 1674 aa0.42□□□□□ -2.34
RPL39-201ENST00000361575 ZNF609O15014 1411 aa0.41□□□□□ -2.34
RPL39-201ENST00000361575 C10orf71Q711Q0 1435 aa0.41□□□□□ -2.34
RPL39-201ENST00000361575 MUC5ACP98088 5654 aa0.41□□□□□ -2.34
RPL39-201ENST00000361575 HMGN4O00479 90 aa0.41□□□□□ -2.34
RPL39-201ENST00000361575 NPVFQ9HCQ7 196 aa0.41□□□□□ -2.34
RPL39-201ENST00000361575 SPTBN2O15020 2390 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms