RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 SLC25A29Q8N8R3 303 aa9.59□□□□□ -0.87
CCDC197-201ENST00000359253 Q8NAQ8 132 aa9.59□□□□□ -0.87
CCDC197-201ENST00000359253 C20orf203Q8NBC4 194 aa9.59□□□□□ -0.87
CCDC197-201ENST00000359253 DKK2Q9UBU2 259 aa9.59□□□□□ -0.87
CCDC197-201ENST00000359253 PYGO1Q9Y3Y4 419 aa9.59□□□□□ -0.87
CCDC197-201ENST00000359253 IGHV4-28A0A0C4DH34 117 aa9.58□□□□□ -0.88
CCDC197-201ENST00000359253 P0DMU3 169 aa9.58□□□□□ -0.88
CCDC197-201ENST00000359253 FAM231AP0DMU4 169 aa9.58□□□□□ -0.88
CCDC197-201ENST00000359253 FAM231CP0DMU5 169 aa9.58□□□□□ -0.88
CCDC197-201ENST00000359253 EMP1P54849 157 aa9.58□□□□□ -0.88
CCDC197-201ENST00000359253 FHL2Q14192 279 aa9.58□□□□□ -0.88
CCDC197-201ENST00000359253 ZNRF2Q8NHG8 242 aa9.58□□□□□ -0.88
CCDC197-201ENST00000359253 NACAE9PAV3 2078 aa9.58□□□□□ -0.88
CCDC197-201ENST00000359253 A0A087WX48 190 aa9.57□□□□□ -0.88
CCDC197-201ENST00000359253 IGIPA6NJ69 53 aa9.57□□□□□ -0.88
CCDC197-201ENST00000359253 H0Y8G0 127 aa9.57□□□□□ -0.88
CCDC197-201ENST00000359253 NHLRC4P0CG21 123 aaPredicted RBP9.57□□□□□ -0.88
CCDC197-201ENST00000359253 UBE2D3P61077 147 aa9.57□□□□□ -0.88
CCDC197-201ENST00000359253 UBE2D2P62837 147 aa9.57□□□□□ -0.88
CCDC197-201ENST00000359253 FAM222AQ5U5X8 452 aa9.57□□□□□ -0.88
CCDC197-201ENST00000359253 NEGR1Q7Z3B1 354 aa9.57□□□□□ -0.88
CCDC197-201ENST00000359253 B9D2Q9BPU9 175 aa9.57□□□□□ -0.88
CCDC197-201ENST00000359253 GTSF1LQ9H1H1 148 aa9.57□□□□□ -0.88
CCDC197-201ENST00000359253 DNAH3Q8TD57 4116 aa9.57□□□□□ -0.88
CCDC197-201ENST00000359253 DEFB130BP0DP73 79 aa9.56□□□□□ -0.88
CCDC197-201ENST00000359253 DEFB130AP0DP74 79 aa9.56□□□□□ -0.88
CCDC197-201ENST00000359253 ODF1Q14990 250 aa9.56□□□□□ -0.88
CCDC197-201ENST00000359253 SPATA45Q537H7 98 aa9.56□□□□□ -0.88
CCDC197-201ENST00000359253 PRO0255Q9UI72 69 aa9.56□□□□□ -0.88
CCDC197-201ENST00000359253 HHLA3Q9XRX5 114 aa9.56□□□□□ -0.88
CCDC197-201ENST00000359253 PAM16Q9Y3D7 125 aa9.56□□□□□ -0.88
CCDC197-201ENST00000359253 PCP4L1A6NKN8 68 aa9.55□□□□□ -0.88
CCDC197-201ENST00000359253 DPM2O94777 84 aa9.55□□□□□ -0.88
CCDC197-201ENST00000359253 PLNP26678 52 aa9.55□□□□□ -0.88
CCDC197-201ENST00000359253 DAD1P61803 113 aa9.55□□□□□ -0.88
CCDC197-201ENST00000359253 BAALCQ8WXS3 180 aa9.55□□□□□ -0.88
CCDC197-201ENST00000359253 SPANXA1Q9NS26 97 aa9.55□□□□□ -0.88
CCDC197-201ENST00000359253 F8VRH5 84 aa9.54□□□□□ -0.88
CCDC197-201ENST00000359253 H7C423 109 aa9.54□□□□□ -0.88
CCDC197-201ENST00000359253 IGKCP01834 107 aa9.54□□□□□ -0.88
CCDC197-201ENST00000359253 PMVKQ15126 192 aa9.54□□□□□ -0.88
CCDC197-201ENST00000359253 TIMM21Q9BVV7 248 aa9.54□□□□□ -0.88
CCDC197-201ENST00000359253 ATP5G1P05496 136 aa9.53□□□□□ -0.88
CCDC197-201ENST00000359253 ATOH7Q8N100 152 aa9.53□□□□□ -0.88
CCDC197-201ENST00000359253 MIEN1Q9BRT3 115 aa9.53□□□□□ -0.88
CCDC197-201ENST00000359253 CHCHD7Q9BUK0 85 aa9.53□□□□□ -0.88
CCDC197-201ENST00000359253 PRO1933Q9H354 126 aa9.53□□□□□ -0.88
CCDC197-201ENST00000359253 C11orf68Q9H3H3 251 aaKnown RBP9.53□□□□□ -0.88
CCDC197-201ENST00000359253 CHTOPQ9Y3Y2 248 aaKnown RBP9.53□□□□□ -0.88
CCDC197-201ENST00000359253 GAGE12JA6NER3 117 aa9.52□□□□□ -0.89
CCDC197-201ENST00000359253 DDTP30046 118 aa9.52□□□□□ -0.89
CCDC197-201ENST00000359253 RPL39P62891 51 aaKnown RBP9.52□□□□□ -0.89
CCDC197-201ENST00000359253 GAGE1Q13065 139 aa9.52□□□□□ -0.89
CCDC197-201ENST00000359253 GAGE4Q13068 117 aa9.52□□□□□ -0.89
CCDC197-201ENST00000359253 GAGE5Q13069 117 aa9.52□□□□□ -0.89
CCDC197-201ENST00000359253 GAGE13Q4V321 117 aa9.52□□□□□ -0.89
CCDC197-201ENST00000359253 UQCR10Q9UDW1 63 aa9.52□□□□□ -0.89
CCDC197-201ENST00000359253 Q9UF83 564 aa9.52□□□□□ -0.89
CCDC197-201ENST00000359253 PRSS29PA6NIE9 313 aa9.51□□□□□ -0.89
CCDC197-201ENST00000359253 LINC00694P0DN24 101 aa9.51□□□□□ -0.89
CCDC197-201ENST00000359253 SH2D6Q7Z4S9 175 aa9.51□□□□□ -0.89
CCDC197-201ENST00000359253 PHLDA1Q8WV24 401 aaPredicted RBP9.51□□□□□ -0.89
CCDC197-201ENST00000359253 PMCHL2Q9BQD1 86 aa9.51□□□□□ -0.89
CCDC197-201ENST00000359253 VCX2Q9H322 139 aa9.51□□□□□ -0.89
CCDC197-201ENST00000359253 CST9LQ9H4G1 147 aa9.51□□□□□ -0.89
CCDC197-201ENST00000359253 CSDC2Q9Y534 153 aaKnown RBP9.51□□□□□ -0.89
CCDC197-201ENST00000359253 IGLC3P0DOY3 106 aa9.5□□□□□ -0.89
CCDC197-201ENST00000359253 MRPS36P82909 103 aaKnown RBP9.5□□□□□ -0.89
CCDC197-201ENST00000359253 MRPL35Q9NZE8 188 aaKnown RBP9.5□□□□□ -0.89
CCDC197-201ENST00000359253 TRBV25-1A0A075B6N4 114 aa9.49□□□□□ -0.89
CCDC197-201ENST00000359253 TRAV26-1A0A087WT03 109 aa9.49□□□□□ -0.89
CCDC197-201ENST00000359253 IGHV3-38A0A0C4DH36 116 aa9.49□□□□□ -0.89
CCDC197-201ENST00000359253 PAX4O43316 350 aa9.49□□□□□ -0.89
CCDC197-201ENST00000359253 MRPL52Q86TS9 123 aaKnown RBP9.49□□□□□ -0.89
CCDC197-201ENST00000359253 SBSPONQ8IVN8 264 aa9.49□□□□□ -0.89
CCDC197-201ENST00000359253 SPATA25Q9BR10 227 aa9.49□□□□□ -0.89
CCDC197-201ENST00000359253 UBE2D4Q9Y2X8 147 aa9.49□□□□□ -0.89
CCDC197-201ENST00000359253 IGLV4-3A0A075B6K6 122 aa9.48□□□□□ -0.89
CCDC197-201ENST00000359253 hDV102S1A0JD36 115 aa9.48□□□□□ -0.89
CCDC197-201ENST00000359253 DGAT2L7PQ6IED9 249 aa9.48□□□□□ -0.89
CCDC197-201ENST00000359253 AMELXQ99217 191 aa9.48□□□□□ -0.89
CCDC197-201ENST00000359253 TMEM243Q9BU79 118 aa9.48□□□□□ -0.89
CCDC197-201ENST00000359253 H3BNG1 76 aa9.47□□□□□ -0.89
CCDC197-201ENST00000359253 UBE2L6O14933 153 aa9.47□□□□□ -0.89
CCDC197-201ENST00000359253 GYPEP15421 78 aa9.47□□□□□ -0.89
CCDC197-201ENST00000359253 ZNF25P17030 456 aaPredicted RBP9.47□□□□□ -0.89
CCDC197-201ENST00000359253 MAJINQ3KP22 176 aa9.47□□□□□ -0.89
CCDC197-201ENST00000359253 ATP6V0E2Q8NHE4 81 aa9.47□□□□□ -0.89
CCDC197-201ENST00000359253 TM2D3Q9BRN9 247 aa9.47□□□□□ -0.89
CCDC197-201ENST00000359253 C2orf88Q9BSF0 95 aa9.47□□□□□ -0.89
CCDC197-201ENST00000359253 PRKDCP78527 4128 aaKnown RBP9.46□□□□□ -0.89
CCDC197-201ENST00000359253 TRBV6-8A0A0A6YYG3 113 aa9.46□□□□□ -0.9
CCDC197-201ENST00000359253 DEFB4AO15263 64 aa9.46□□□□□ -0.9
CCDC197-201ENST00000359253 DLEU1O43261 78 aa9.46□□□□□ -0.9
CCDC197-201ENST00000359253 COX8AP10176 69 aa9.46□□□□□ -0.9
CCDC197-201ENST00000359253 SLC25A34Q6PIV7 304 aa9.46□□□□□ -0.9
CCDC197-201ENST00000359253 NTM-AS1Q6ZSK4 140 aa9.46□□□□□ -0.9
CCDC197-201ENST00000359253 NFE4Q86UQ8 179 aa9.46□□□□□ -0.9
CCDC197-201ENST00000359253 DEFB104AQ8WTQ1 72 aa9.46□□□□□ -0.9
CCDC197-201ENST00000359253 CELA1Q9UNI1 258 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms