RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 A0A0J9YWU9 116 aa9.71□□□□□ -0.86
NLRC3-202ENST00000359128 MIAQ16674 131 aa9.71□□□□□ -0.86
NLRC3-202ENST00000359128 C22orf34Q6ZV56 151 aa9.71□□□□□ -0.86
NLRC3-202ENST00000359128 SYCNQ0VAF6 134 aa9.71□□□□□ -0.86
NLRC3-202ENST00000359128 TRBV6-4A0A1B0GX49 114 aa9.7□□□□□ -0.86
NLRC3-202ENST00000359128 WNK2Q9Y3S1 2297 aa9.7□□□□□ -0.86
NLRC3-202ENST00000359128 NUPR2A6NF83 97 aa9.7□□□□□ -0.86
NLRC3-202ENST00000359128 ZNF80P51504 273 aaPredicted RBP9.7□□□□□ -0.86
NLRC3-202ENST00000359128 IGKV2D-26A0A0A0MRZ7 120 aa9.7□□□□□ -0.86
NLRC3-202ENST00000359128 LY6LH3BQJ8 138 aa9.69□□□□□ -0.86
NLRC3-202ENST00000359128 C18orf65Q6ZTR6 163 aa9.69□□□□□ -0.86
NLRC3-202ENST00000359128 NANOS2P60321 138 aaKnown RBP9.69□□□□□ -0.86
NLRC3-202ENST00000359128 SPTAN1Q13813 2472 aaKnown RBP9.69□□□□□ -0.86
NLRC3-202ENST00000359128 C9orf85Q96MD7 179 aa9.69□□□□□ -0.86
NLRC3-202ENST00000359128 NBASA2RRP1 2371 aa9.69□□□□□ -0.86
NLRC3-202ENST00000359128 C19orf71A6NCJ1 209 aa9.68□□□□□ -0.86
NLRC3-202ENST00000359128 EBI3Q14213 229 aa9.68□□□□□ -0.86
NLRC3-202ENST00000359128 SMR3AQ99954 134 aa9.68□□□□□ -0.86
NLRC3-202ENST00000359128 BPY2O14599 106 aa9.68□□□□□ -0.86
NLRC3-202ENST00000359128 SMIM20Q8N5G0 67 aa9.68□□□□□ -0.86
NLRC3-202ENST00000359128 NACAE9PAV3 2078 aa9.68□□□□□ -0.86
NLRC3-202ENST00000359128 ATOX1O00244 68 aa9.68□□□□□ -0.86
NLRC3-202ENST00000359128 CRYGBP07316 175 aa9.68□□□□□ -0.86
NLRC3-202ENST00000359128 GDF5OSQ5U4N7 250 aa9.67□□□□□ -0.86
NLRC3-202ENST00000359128 HIGD1BQ9P298 99 aa9.67□□□□□ -0.86
NLRC3-202ENST00000359128 MALRD1Q5VYJ5 2156 aa9.67□□□□□ -0.86
NLRC3-202ENST00000359128 ODF1Q14990 250 aa9.67□□□□□ -0.86
NLRC3-202ENST00000359128 CLUHP3Q96NS8 147 aa9.67□□□□□ -0.86
NLRC3-202ENST00000359128 HRCT1Q6UXD1 115 aa9.67□□□□□ -0.86
NLRC3-202ENST00000359128 OXLD1Q5BKU9 147 aa9.67□□□□□ -0.86
NLRC3-202ENST00000359128 CEP192Q8TEP8 1941 aa9.67□□□□□ -0.86
NLRC3-202ENST00000359128 LOC107984640A0A0U1RRK4 108 aa9.66□□□□□ -0.86
NLRC3-202ENST00000359128 CHD3Q12873 2000 aaKnown RBP9.66□□□□□ -0.86
NLRC3-202ENST00000359128 NDUFA7O95182 113 aa9.66□□□□□ -0.86
NLRC3-202ENST00000359128 WFDC10AQ9H1F0 79 aa9.66□□□□□ -0.86
NLRC3-202ENST00000359128 LINC00474Q9P2X8 69 aa9.66□□□□□ -0.86
NLRC3-202ENST00000359128 PCNX2A6NKB5 2137 aa9.66□□□□□ -0.86
NLRC3-202ENST00000359128 FXYD2P54710 66 aa9.65□□□□□ -0.86
NLRC3-202ENST00000359128 LELP1Q5T871 98 aa9.65□□□□□ -0.86
NLRC3-202ENST00000359128 LYPD6Q86Y78 171 aa9.65□□□□□ -0.86
NLRC3-202ENST00000359128 A0A0J9YXY3 114 aa9.65□□□□□ -0.86
NLRC3-202ENST00000359128 ZFAND3Q9H8U3 227 aa9.65□□□□□ -0.86
NLRC3-202ENST00000359128 XAGE1AQ9HD64 81 aa9.64□□□□□ -0.87
NLRC3-202ENST00000359128 TTTY13Q9BZ97 58 aa9.64□□□□□ -0.87
NLRC3-202ENST00000359128 SPANXB1Q9NS25 103 aaPredicted RBP9.64□□□□□ -0.87
NLRC3-202ENST00000359128 NUP210LQ5VU65 1888 aa9.64□□□□□ -0.87
NLRC3-202ENST00000359128 MED13Q9UHV7 2174 aa9.64□□□□□ -0.87
NLRC3-202ENST00000359128 TECTAO75443 2155 aa9.64□□□□□ -0.87
NLRC3-202ENST00000359128 IGLV4-69A0A075B6H9 119 aa9.64□□□□□ -0.87
NLRC3-202ENST00000359128 Q8N976 141 aa9.64□□□□□ -0.87
NLRC3-202ENST00000359128 PPDPFQ9H3Y8 114 aa9.64□□□□□ -0.87
NLRC3-202ENST00000359128 IGHV4-30-4P0DP06 118 aa9.64□□□□□ -0.87
NLRC3-202ENST00000359128 FOXI1Q12951 378 aa9.63□□□□□ -0.87
NLRC3-202ENST00000359128 MBD6Q96DN6 1003 aa9.63□□□□□ -0.87
NLRC3-202ENST00000359128 PLA2G2EQ9NZK7 142 aa9.63□□□□□ -0.87
NLRC3-202ENST00000359128 USP17L23D6RBM5 183 aa9.63□□□□□ -0.87
NLRC3-202ENST00000359128 NUPR1O60356 82 aa9.63□□□□□ -0.87
NLRC3-202ENST00000359128 C1orf229Q6ZS94 237 aaPredicted RBP9.63□□□□□ -0.87
NLRC3-202ENST00000359128 IGKV2-28A0A075B6P5 120 aa9.63□□□□□ -0.87
NLRC3-202ENST00000359128 IGKV2D-28P01615 120 aa9.63□□□□□ -0.87
NLRC3-202ENST00000359128 PROK1P58294 105 aa9.63□□□□□ -0.87
NLRC3-202ENST00000359128 SPINK6Q6UWN8 80 aa9.63□□□□□ -0.87
NLRC3-202ENST00000359128 IBA57-AS1B1ANH7 110 aa9.63□□□□□ -0.87
NLRC3-202ENST00000359128 PLAC8L1A1L4L8 177 aa9.62□□□□□ -0.87
NLRC3-202ENST00000359128 FAM236AA0A1B0GUQ0 79 aa9.62□□□□□ -0.87
NLRC3-202ENST00000359128 FAM236BA0A1B0GV22 79 aa9.62□□□□□ -0.87
NLRC3-202ENST00000359128 TRAV23DV6A0A075B6W5 121 aa9.62□□□□□ -0.87
NLRC3-202ENST00000359128 H3BT86 120 aa9.62□□□□□ -0.87
NLRC3-202ENST00000359128 DCANP1Q8TF63 244 aa9.62□□□□□ -0.87
NLRC3-202ENST00000359128 UBE2D2P62837 147 aa9.61□□□□□ -0.87
NLRC3-202ENST00000359128 TEN1Q86WV5 123 aa9.61□□□□□ -0.87
NLRC3-202ENST00000359128 WFDC10BQ8IUB3 73 aa9.61□□□□□ -0.87
NLRC3-202ENST00000359128 IGLV9-49A0A0B4J1Y8 123 aa9.61□□□□□ -0.87
NLRC3-202ENST00000359128 CDKN2A-AS1Q9UH64 79 aa9.61□□□□□ -0.87
NLRC3-202ENST00000359128 IGLV4-3A0A075B6K6 122 aa9.61□□□□□ -0.87
NLRC3-202ENST00000359128 IGLC6P0CF74 106 aa9.6□□□□□ -0.87
NLRC3-202ENST00000359128 BDP1A6H8Y1 2624 aa9.6□□□□□ -0.87
NLRC3-202ENST00000359128 TMEM223A0PJW6 202 aa9.6□□□□□ -0.87
NLRC3-202ENST00000359128 P0C879 139 aa9.6□□□□□ -0.87
NLRC3-202ENST00000359128 DOPEY2Q9Y3R5 2298 aa9.6□□□□□ -0.87
NLRC3-202ENST00000359128 ROS1P08922 2347 aa9.6□□□□□ -0.87
NLRC3-202ENST00000359128 LOC100131303A0A0U1RQF7 123 aa9.6□□□□□ -0.87
NLRC3-202ENST00000359128 CD164L2Q6UWJ8 174 aa9.6□□□□□ -0.87
NLRC3-202ENST00000359128 SS18L2Q9UHA2 77 aa9.6□□□□□ -0.87
NLRC3-202ENST00000359128 M0QY20 66 aa9.59□□□□□ -0.87
NLRC3-202ENST00000359128 DHRS4-AS1Q9P1J3 65 aa9.59□□□□□ -0.87
NLRC3-202ENST00000359128 IGLV5-52A0A0A0MRZ9 124 aa9.59□□□□□ -0.87
NLRC3-202ENST00000359128 RBX1P62877 108 aa9.59□□□□□ -0.87
NLRC3-202ENST00000359128 MUC6Q6W4X9 2439 aa9.59□□□□□ -0.87
NLRC3-202ENST00000359128 M0R378 163 aa9.58□□□□□ -0.88
NLRC3-202ENST00000359128 RPL37AP8A6NKH3 93 aa9.58□□□□□ -0.88
NLRC3-202ENST00000359128 Q6ZS46 218 aa9.58□□□□□ -0.88
NLRC3-202ENST00000359128 SPATA12Q7Z6I5 190 aa9.58□□□□□ -0.88
NLRC3-202ENST00000359128 ALPK3Q96L96 1907 aa9.58□□□□□ -0.88
NLRC3-202ENST00000359128 IGLV1-40P01703 118 aa9.57□□□□□ -0.88
NLRC3-202ENST00000359128 SLPIP03973 132 aa9.57□□□□□ -0.88
NLRC3-202ENST00000359128 U3KQK5 164 aa9.57□□□□□ -0.88
NLRC3-202ENST00000359128 K7ERS5 55 aa9.57□□□□□ -0.88
NLRC3-202ENST00000359128 RETNQ9HD89 108 aa9.57□□□□□ -0.88
NLRC3-202ENST00000359128 Q8N6K4 173 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms