RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 C19orf84I3L1E1 186 aa10.34□□□□□ -0.75
VCP-201ENST00000358901 COX7A2LO14548 114 aa10.34□□□□□ -0.75
VCP-201ENST00000358901 MIR7-3HGQ8N6C7 128 aa10.34□□□□□ -0.75
VCP-201ENST00000358901 IGHV4-4A0A075B6R2 117 aa10.34□□□□□ -0.75
VCP-201ENST00000358901 IGKV2D-24A0A075B6R9 120 aa10.34□□□□□ -0.75
VCP-201ENST00000358901 FSTL3O95633 263 aa10.34□□□□□ -0.75
VCP-201ENST00000358901 H3BT86 120 aa10.34□□□□□ -0.75
VCP-201ENST00000358901 LECT2O14960 151 aa10.33□□□□□ -0.76
VCP-201ENST00000358901 Q9HAA7 133 aa10.33□□□□□ -0.76
VCP-201ENST00000358901 FAM236AA0A1B0GUQ0 79 aa10.33□□□□□ -0.76
VCP-201ENST00000358901 FAM236BA0A1B0GV22 79 aa10.33□□□□□ -0.76
VCP-201ENST00000358901 K7EQG2 157 aa10.33□□□□□ -0.76
VCP-201ENST00000358901 CEP192Q8TEP8 1941 aa10.33□□□□□ -0.76
VCP-201ENST00000358901 A0A0J9YXY3 114 aa10.33□□□□□ -0.76
VCP-201ENST00000358901 HHLA3Q9XRX5 114 aa10.33□□□□□ -0.76
VCP-201ENST00000358901 U3KQK5 164 aa10.32□□□□□ -0.76
VCP-201ENST00000358901 CDK2AP2O75956 126 aa10.32□□□□□ -0.76
VCP-201ENST00000358901 ATP5G1P05496 136 aa10.32□□□□□ -0.76
VCP-201ENST00000358901 RBMY1FQ15415 496 aaKnown RBP10.32□□□□□ -0.76
VCP-201ENST00000358901 MRPL23Q16540 153 aaKnown RBP10.32□□□□□ -0.76
VCP-201ENST00000358901 ATG2AQ2TAZ0 1938 aa10.32□□□□□ -0.76
VCP-201ENST00000358901 CITED2Q99967 270 aaPredicted RBP10.31□□□□□ -0.76
VCP-201ENST00000358901 MAP6D1Q9H9H5 199 aa10.31□□□□□ -0.76
VCP-201ENST00000358901 MKI67P46013 3256 aaKnown RBP10.31□□□□□ -0.76
VCP-201ENST00000358901 DEFB4AO15263 64 aa10.31□□□□□ -0.76
VCP-201ENST00000358901 GAS8-AS1O95177 125 aa10.31□□□□□ -0.76
VCP-201ENST00000358901 C2orf91Q6ZV80 131 aa10.31□□□□□ -0.76
VCP-201ENST00000358901 C11orf21Q9P2W6 132 aa10.31□□□□□ -0.76
VCP-201ENST00000358901 CDKN2A-AS1Q9UH64 79 aa10.31□□□□□ -0.76
VCP-201ENST00000358901 TNRC6BQ9UPQ9 1833 aaKnown RBP10.31□□□□□ -0.76
VCP-201ENST00000358901 NFE4Q86UQ8 179 aa10.3□□□□□ -0.76
VCP-201ENST00000358901 A0A0B4J2C4 111 aa10.3□□□□□ -0.76
VCP-201ENST00000358901 TRBV10-1A0A0K0K1A3 114 aa10.3□□□□□ -0.76
VCP-201ENST00000358901 SMIM20Q8N5G0 67 aa10.3□□□□□ -0.76
VCP-201ENST00000358901 DEFB105AQ8NG35 78 aa10.3□□□□□ -0.76
VCP-201ENST00000358901 CAMK2N2Q96S95 79 aa10.3□□□□□ -0.76
VCP-201ENST00000358901 C1orf43Q9BWL3 253 aa10.3□□□□□ -0.76
VCP-201ENST00000358901 SPART-AS1P0CW21 52 aa10.3□□□□□ -0.76
VCP-201ENST00000358901 Q6ZTI0 123 aa10.3□□□□□ -0.76
VCP-201ENST00000358901 ZNF22P17026 224 aaPredicted RBP10.3□□□□□ -0.76
VCP-201ENST00000358901 MIAQ16674 131 aa10.3□□□□□ -0.76
VCP-201ENST00000358901 TMEM263Q8WUH6 116 aaKnown RBP10.29□□□□□ -0.76
VCP-201ENST00000358901 EML5Q05BV3 1969 aa10.29□□□□□ -0.76
VCP-201ENST00000358901 IGHV3-30P01768 117 aa10.29□□□□□ -0.76
VCP-201ENST00000358901 IGHV3-33P01772 117 aa10.29□□□□□ -0.76
VCP-201ENST00000358901 IGHV3-30-5P0DP03 117 aa10.29□□□□□ -0.76
VCP-201ENST00000358901 C10orf99Q6UWK7 81 aa10.29□□□□□ -0.76
VCP-201ENST00000358901 TRAV26-1A0A087WT03 109 aa10.28□□□□□ -0.76
VCP-201ENST00000358901 RBX1P62877 108 aa10.28□□□□□ -0.76
VCP-201ENST00000358901 DEFB135Q30KP9 77 aa10.28□□□□□ -0.76
VCP-201ENST00000358901 IGLV4-3A0A075B6K6 122 aa10.28□□□□□ -0.76
VCP-201ENST00000358901 C4orf3Q8WVX3 66 aa10.28□□□□□ -0.76
VCP-201ENST00000358901 SPANXB1Q9NS25 103 aaPredicted RBP10.28□□□□□ -0.76
VCP-201ENST00000358901 A0A1B0GX51 115 aa10.28□□□□□ -0.76
VCP-201ENST00000358901 hADV29S1A0JD25 119 aa10.28□□□□□ -0.76
VCP-201ENST00000358901 C9orf66Q5T8R8 295 aa10.28□□□□□ -0.76
VCP-201ENST00000358901 M0QY20 66 aa10.27□□□□□ -0.76
VCP-201ENST00000358901 NRACQ8N912 160 aa10.27□□□□□ -0.76
VCP-201ENST00000358901 LINC00467Q9BRT7 94 aa10.27□□□□□ -0.76
VCP-201ENST00000358901 ODF3Q96PU9 254 aa10.27□□□□□ -0.77
VCP-201ENST00000358901 PRR9Q5T870 116 aa10.27□□□□□ -0.77
VCP-201ENST00000358901 C11orf71Q6IPW1 123 aa10.27□□□□□ -0.77
VCP-201ENST00000358901 Q8N6K4 173 aa10.26□□□□□ -0.77
VCP-201ENST00000358901 URB1-AS1Q96HZ7 61 aa10.26□□□□□ -0.77
VCP-201ENST00000358901 Q8N976 141 aa10.26□□□□□ -0.77
VCP-201ENST00000358901 POLQO75417 2590 aa10.26□□□□□ -0.77
VCP-201ENST00000358901 TEX49A0A1B0GTD5 131 aa10.26□□□□□ -0.77
VCP-201ENST00000358901 MT-ATP8P03928 68 aa10.26□□□□□ -0.77
VCP-201ENST00000358901 KLK12Q9UKR0 248 aa10.26□□□□□ -0.77
VCP-201ENST00000358901 PTPRSQ13332 1948 aa10.25□□□□□ -0.77
VCP-201ENST00000358901 RNASE3P12724 160 aaKnown RBP10.25□□□□□ -0.77
VCP-201ENST00000358901 PROK1P58294 105 aa10.25□□□□□ -0.77
VCP-201ENST00000358901 SPAG11BQ08648 103 aa10.25□□□□□ -0.77
VCP-201ENST00000358901 RMI2Q96E14 147 aa10.25□□□□□ -0.77
VCP-201ENST00000358901 RBM3P98179 157 aaKnown RBP10.25□□□□□ -0.77
VCP-201ENST00000358901 PRO0255Q9UI72 69 aa10.24□□□□□ -0.77
VCP-201ENST00000358901 TRBV27A0A0K0K1C4 114 aa10.24□□□□□ -0.77
VCP-201ENST00000358901 BRCA2P51587 3418 aa10.24□□□□□ -0.77
VCP-201ENST00000358901 TMEM223A0PJW6 202 aa10.24□□□□□ -0.77
VCP-201ENST00000358901 ATOX1O00244 68 aa10.24□□□□□ -0.77
VCP-201ENST00000358901 NCR3O14931 201 aa10.24□□□□□ -0.77
VCP-201ENST00000358901 MRAPQ8TCY5 172 aa10.24□□□□□ -0.77
VCP-201ENST00000358901 ZNF462Q96JM2 2506 aa10.23□□□□□ -0.77
VCP-201ENST00000358901 DEFB114Q30KQ6 69 aa10.23□□□□□ -0.77
VCP-201ENST00000358901 CITED1Q99966 193 aa10.23□□□□□ -0.77
VCP-201ENST00000358901 ETDCA0A1B0GVM5 59 aa10.22□□□□□ -0.77
VCP-201ENST00000358901 DNAJC9-AS1A6NH13 148 aa10.22□□□□□ -0.77
VCP-201ENST00000358901 JMJD7-PLA2G4BH0Y9G9 81 aa10.22□□□□□ -0.77
VCP-201ENST00000358901 HIST2H2BDQ6DRA6 164 aa10.22□□□□□ -0.77
VCP-201ENST00000358901 LRP4O75096 1905 aa10.22□□□□□ -0.77
VCP-201ENST00000358901 RPL18AQ02543 176 aaKnown RBP10.22□□□□□ -0.77
VCP-201ENST00000358901 C14orf132Q9NPU4 83 aa10.22□□□□□ -0.77
VCP-201ENST00000358901 UBE2BP63146 152 aa10.21□□□□□ -0.77
VCP-201ENST00000358901 SPANXCQ9NY87 97 aa10.21□□□□□ -0.77
VCP-201ENST00000358901 IGHV4-28A0A0C4DH34 117 aa10.21□□□□□ -0.77
VCP-201ENST00000358901 A8MZ25 164 aa10.21□□□□□ -0.77
VCP-201ENST00000358901 NDUFA1O15239 70 aa10.21□□□□□ -0.77
VCP-201ENST00000358901 CDSNQ15517 529 aa10.21□□□□□ -0.78
VCP-201ENST00000358901 RNF183Q96D59 192 aa10.21□□□□□ -0.78
VCP-201ENST00000358901 TRIAP1O43715 76 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms