RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 CFC1BP0CG36 223 aa12.97□□□□□ -0.33
GYPC-202ENST00000356887 CFC1P0CG37 223 aa12.97□□□□□ -0.33
GYPC-202ENST00000356887 IGLV4-3A0A075B6K6 122 aa12.96□□□□□ -0.33
GYPC-202ENST00000356887 CFAP126Q5VTH2 177 aa12.96□□□□□ -0.33
GYPC-202ENST00000356887 TEX29Q8N6K0 151 aa12.96□□□□□ -0.33
GYPC-202ENST00000356887 LOC107984156A0A0G2JMH3 177 aa12.95□□□□□ -0.34
GYPC-202ENST00000356887 A8MTW9 85 aa12.95□□□□□ -0.34
GYPC-202ENST00000356887 MT-ATP8P03928 68 aa12.95□□□□□ -0.34
GYPC-202ENST00000356887 ZNF22P17026 224 aaPredicted RBP12.95□□□□□ -0.34
GYPC-202ENST00000356887 SMCPP49901 116 aaPredicted RBP12.95□□□□□ -0.34
GYPC-202ENST00000356887 ARL17AQ8IVW1 177 aa12.95□□□□□ -0.34
GYPC-202ENST00000356887 RHODO00212 210 aa12.95□□□□□ -0.34
GYPC-202ENST00000356887 PSMB2P49721 201 aa12.95□□□□□ -0.34
GYPC-202ENST00000356887 GCN1Q92616 2671 aaKnown RBP12.94□□□□□ -0.34
GYPC-202ENST00000356887 SORL1Q92673 2214 aa12.94□□□□□ -0.34
GYPC-202ENST00000356887 A0A0J9YXV3 536 aa12.93□□□□□ -0.34
GYPC-202ENST00000356887 SLURP1P55000 103 aa12.93□□□□□ -0.34
GYPC-202ENST00000356887 XGP55808 180 aa12.93□□□□□ -0.34
GYPC-202ENST00000356887 DEFB131AP59861 70 aa12.93□□□□□ -0.34
GYPC-202ENST00000356887 SFTA2Q6UW10 78 aa12.93□□□□□ -0.34
GYPC-202ENST00000356887 PTH2Q96A98 100 aa12.93□□□□□ -0.34
GYPC-202ENST00000356887 TMEM126AQ9H061 195 aa12.93□□□□□ -0.34
GYPC-202ENST00000356887 LYRM7Q5U5X0 104 aa12.93□□□□□ -0.34
GYPC-202ENST00000356887 C18orf65Q6ZTR6 163 aa12.93□□□□□ -0.34
GYPC-202ENST00000356887 BEX4Q9NWD9 120 aaPredicted RBP12.93□□□□□ -0.34
GYPC-202ENST00000356887 PYGO1Q9Y3Y4 419 aa12.93□□□□□ -0.34
GYPC-202ENST00000356887 TMEM262E9PQX1 116 aa12.92□□□□□ -0.34
GYPC-202ENST00000356887 H3BMM0 161 aa12.92□□□□□ -0.34
GYPC-202ENST00000356887 NHLRC4P0CG21 123 aaPredicted RBP12.92□□□□□ -0.34
GYPC-202ENST00000356887 INSL3P51460 131 aa12.92□□□□□ -0.34
GYPC-202ENST00000356887 PROK1P58294 105 aa12.92□□□□□ -0.34
GYPC-202ENST00000356887 C10orf126Q8N4M7 172 aa12.92□□□□□ -0.34
GYPC-202ENST00000356887 FAM104AQ969W3 186 aa12.92□□□□□ -0.34
GYPC-202ENST00000356887 APCP25054 2843 aa12.92□□□□□ -0.34
GYPC-202ENST00000356887 IGHV3-73A0A0B4J1V6 119 aa12.92□□□□□ -0.34
GYPC-202ENST00000356887 RBMY1BA6NDE4 496 aaKnown RBP12.92□□□□□ -0.34
GYPC-202ENST00000356887 RBMY1EA6NEQ0 496 aaKnown RBP12.92□□□□□ -0.34
GYPC-202ENST00000356887 RBMY1DP0C7P1 496 aaKnown RBP12.92□□□□□ -0.34
GYPC-202ENST00000356887 IGHV4-31P0DP07 118 aa12.92□□□□□ -0.34
GYPC-202ENST00000356887 HTN1P15515 57 aa12.92□□□□□ -0.34
GYPC-202ENST00000356887 DEFB113Q30KQ7 82 aa12.92□□□□□ -0.34
GYPC-202ENST00000356887 DEFB136Q30KP8 78 aa12.91□□□□□ -0.34
GYPC-202ENST00000356887 PRO1854Q9UHT4 67 aa12.91□□□□□ -0.34
GYPC-202ENST00000356887 NAV2Q8IVL1 2488 aa12.91□□□□□ -0.34
GYPC-202ENST00000356887 TRAV25A0A0B4J276 109 aa12.9□□□□□ -0.34
GYPC-202ENST00000356887 TRAV2A0A0B4J234 112 aa12.9□□□□□ -0.34
GYPC-202ENST00000356887 TCL1BO95988 128 aa12.9□□□□□ -0.34
GYPC-202ENST00000356887 Q6Q795 121 aa12.9□□□□□ -0.34
GYPC-202ENST00000356887 TRBV20-1A0A075B6N2 111 aa12.89□□□□□ -0.35
GYPC-202ENST00000356887 IGHV3-64A0A075B6Q5 118 aa12.89□□□□□ -0.35
GYPC-202ENST00000356887 A8MWV9 139 aa12.89□□□□□ -0.35
GYPC-202ENST00000356887 M0R2P5 195 aa12.89□□□□□ -0.35
GYPC-202ENST00000356887 PRM2P04554 102 aa12.89□□□□□ -0.35
GYPC-202ENST00000356887 PIK3CD-AS1Q5SR53 167 aa12.89□□□□□ -0.35
GYPC-202ENST00000356887 DUX3Q96PT4 197 aa12.89□□□□□ -0.35
GYPC-202ENST00000356887 FASNP49327 2511 aaKnown RBP12.89□□□□□ -0.35
GYPC-202ENST00000356887 A4D1N5 150 aa12.89□□□□□ -0.35
GYPC-202ENST00000356887 EIF4EBP3O60516 100 aaPredicted RBP12.88□□□□□ -0.35
GYPC-202ENST00000356887 CD28P10747 220 aa12.88□□□□□ -0.35
GYPC-202ENST00000356887 MRPS36P82909 103 aaKnown RBP12.88□□□□□ -0.35
GYPC-202ENST00000356887 Q8N2B8 174 aa12.88□□□□□ -0.35
GYPC-202ENST00000356887 Q6ZSN1 163 aa12.87□□□□□ -0.35
GYPC-202ENST00000356887 LRRC75A-AS1Q8N1F1 130 aa12.87□□□□□ -0.35
GYPC-202ENST00000356887 NDUFV3P56181 108 aaKnown RBP12.87□□□□□ -0.35
GYPC-202ENST00000356887 MUSTN1Q8IVN3 82 aa12.87□□□□□ -0.35
GYPC-202ENST00000356887 SBSPONQ8IVN8 264 aa12.87□□□□□ -0.35
GYPC-202ENST00000356887 TMEM61Q8N0U2 210 aa12.87□□□□□ -0.35
GYPC-202ENST00000356887 TMEM263Q8WUH6 116 aaKnown RBP12.87□□□□□ -0.35
GYPC-202ENST00000356887 CR1P17927 2039 aa12.86□□□□□ -0.35
GYPC-202ENST00000356887 ZNF415Q09FC8 603 aa12.86□□□□□ -0.35
GYPC-202ENST00000356887 PPDPFLQ8WWR9 84 aa12.86□□□□□ -0.35
GYPC-202ENST00000356887 Q9UF83 564 aa12.86□□□□□ -0.35
GYPC-202ENST00000356887 A0A0J9YXY3 114 aa12.85□□□□□ -0.35
GYPC-202ENST00000356887 IGHV3-33P01772 117 aa12.85□□□□□ -0.35
GYPC-202ENST00000356887 IGHV3-30-3P0DP02 117 aa12.85□□□□□ -0.35
GYPC-202ENST00000356887 CEMP1Q6PRD7 247 aaPredicted RBP12.85□□□□□ -0.35
GYPC-202ENST00000356887 PEMTQ9UBM1 199 aa12.85□□□□□ -0.35
GYPC-202ENST00000356887 A0A0B4J2C4 111 aa12.85□□□□□ -0.35
GYPC-202ENST00000356887 M0QXV9 152 aa12.85□□□□□ -0.35
GYPC-202ENST00000356887 LINC00467Q9BRT7 94 aa12.85□□□□□ -0.35
GYPC-202ENST00000356887 CHCHD7Q9BUK0 85 aa12.85□□□□□ -0.35
GYPC-202ENST00000356887 SCGB1C2P0DMR2 95 aa12.84□□□□□ -0.35
GYPC-202ENST00000356887 TIMM21Q9BVV7 248 aa12.84□□□□□ -0.35
GYPC-202ENST00000356887 MAP6D1Q9H9H5 199 aa12.84□□□□□ -0.35
GYPC-202ENST00000356887 NACAE9PAV3 2078 aa12.84□□□□□ -0.35
GYPC-202ENST00000356887 C11orf72Q8NBR9 251 aa12.84□□□□□ -0.35
GYPC-202ENST00000356887 C4orf3Q8WVX3 66 aa12.84□□□□□ -0.35
GYPC-202ENST00000356887 CSDC2Q9Y534 153 aaKnown RBP12.84□□□□□ -0.35
GYPC-202ENST00000356887 KRTAP1-3Q8IUG1 177 aa12.83□□□□□ -0.36
GYPC-202ENST00000356887 TEN1Q86WV5 123 aa12.82□□□□□ -0.36
GYPC-202ENST00000356887 CARD19Q96LW7 228 aa12.82□□□□□ -0.36
GYPC-202ENST00000356887 UBE2D4Q9Y2X8 147 aa12.82□□□□□ -0.36
GYPC-202ENST00000356887 ZANQ9Y493 2812 aa12.82□□□□□ -0.36
GYPC-202ENST00000356887 TINCRA0A1B0GVN0 87 aa12.82□□□□□ -0.36
GYPC-202ENST00000356887 IFITM1P13164 125 aa12.82□□□□□ -0.36
GYPC-202ENST00000356887 BEAN1Q3B7T3 259 aa12.82□□□□□ -0.36
GYPC-202ENST00000356887 LINC01587Q99440 93 aa12.82□□□□□ -0.36
GYPC-202ENST00000356887 LITAFQ99732 161 aa12.82□□□□□ -0.36
GYPC-202ENST00000356887 PRRC2AP48634 2157 aaKnown RBP12.82□□□□□ -0.36
GYPC-202ENST00000356887 TRAV8-3A0A0A6YYJ7 113 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms