RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 DPH3P1Q9H4G8 78 aa6.9□□□□□ -1.3
CAPN3-204ENST00000356316 AP5S1Q9NUS5 200 aa6.9□□□□□ -1.3
CAPN3-204ENST00000356316 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-204ENST00000356316 A0A1B0GUV1 79 aa6.89□□□□□ -1.31
CAPN3-204ENST00000356316 hDV102S1A0JD36 115 aa6.89□□□□□ -1.31
CAPN3-204ENST00000356316 OXTP01178 125 aa6.89□□□□□ -1.31
CAPN3-204ENST00000356316 SULT1A2P50226 295 aa6.89□□□□□ -1.31
CAPN3-204ENST00000356316 TWIST1Q15672 202 aa6.89□□□□□ -1.31
CAPN3-204ENST00000356316 WDR73Q6P4I2 378 aa6.89□□□□□ -1.31
CAPN3-204ENST00000356316 C9orf62Q8N4C0 152 aa6.89□□□□□ -1.31
CAPN3-204ENST00000356316 TAGLN2P37802 199 aaKnown RBP6.88□□□□□ -1.31
CAPN3-204ENST00000356316 COTL1Q14019 142 aa6.88□□□□□ -1.31
CAPN3-204ENST00000356316 SMIM15Q7Z3B0 74 aa6.88□□□□□ -1.31
CAPN3-204ENST00000356316 PGLYRP4Q96LB8 373 aa6.88□□□□□ -1.31
CAPN3-204ENST00000356316 BCL2P10415 239 aa6.87□□□□□ -1.31
CAPN3-204ENST00000356316 AMTP48728 403 aa6.87□□□□□ -1.31
CAPN3-204ENST00000356316 KRTAP26-1Q6PEX3 210 aa6.87□□□□□ -1.31
CAPN3-204ENST00000356316 C20orf203Q8NBC4 194 aa6.87□□□□□ -1.31
CAPN3-204ENST00000356316 NUDT10Q8NFP7 164 aa6.87□□□□□ -1.31
CAPN3-204ENST00000356316 NUDT11Q96G61 164 aa6.87□□□□□ -1.31
CAPN3-204ENST00000356316 IGLV4-60A0A075B6I1 120 aa6.86□□□□□ -1.31
CAPN3-204ENST00000356316 IGHV3-64A0A075B6Q5 118 aa6.86□□□□□ -1.31
CAPN3-204ENST00000356316 KRTAP10-4P60372 401 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-204ENST00000356316 CFAP161Q6P656 301 aa6.86□□□□□ -1.31
CAPN3-204ENST00000356316 SDIM1Q6ZPB5 146 aa6.86□□□□□ -1.31
CAPN3-204ENST00000356316 SLC51BQ86UW2 128 aa6.86□□□□□ -1.31
CAPN3-204ENST00000356316 RPP21Q9H633 154 aaKnown RBP6.86□□□□□ -1.31
CAPN3-204ENST00000356316 TRBV20OR9-2A0A075B6H5 130 aa6.85□□□□□ -1.31
CAPN3-204ENST00000356316 CNBPP62633 177 aaKnown RBP6.85□□□□□ -1.31
CAPN3-204ENST00000356316 AMMECR1LQ6DCA0 310 aa6.85□□□□□ -1.31
CAPN3-204ENST00000356316 TEX261Q6UWH6 196 aa6.85□□□□□ -1.31
CAPN3-204ENST00000356316 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.85□□□□□ -1.31
CAPN3-204ENST00000356316 IGKV3OR2-268A0A0C4DH90 116 aa6.84□□□□□ -1.31
CAPN3-204ENST00000356316 CTRLP40313 264 aa6.84□□□□□ -1.31
CAPN3-204ENST00000356316 OCC1Q8TAD7 63 aa6.84□□□□□ -1.31
CAPN3-204ENST00000356316 RNASE7Q9H1E1 156 aaKnown RBP6.84□□□□□ -1.31
CAPN3-204ENST00000356316 GAGE12HA6NDE8 117 aa6.83□□□□□ -1.32
CAPN3-204ENST00000356316 RNASEKQ6P5S7 137 aaKnown RBP6.83□□□□□ -1.32
CAPN3-204ENST00000356316 TCTE3Q8IZS6 198 aa6.83□□□□□ -1.32
CAPN3-204ENST00000356316 GATD1Q8NB37 220 aa6.83□□□□□ -1.32
CAPN3-204ENST00000356316 BORCS7Q96B45 105 aa6.83□□□□□ -1.32
CAPN3-204ENST00000356316 RNF185Q96GF1 192 aa6.83□□□□□ -1.32
CAPN3-204ENST00000356316 TRAV26-2A0A0B4J265 109 aa6.82□□□□□ -1.32
CAPN3-204ENST00000356316 H7C423 109 aa6.82□□□□□ -1.32
CAPN3-204ENST00000356316 NCR2O95944 276 aa6.82□□□□□ -1.32
CAPN3-204ENST00000356316 APCSP02743 223 aa6.82□□□□□ -1.32
CAPN3-204ENST00000356316 PMCHP20382 165 aa6.82□□□□□ -1.32
CAPN3-204ENST00000356316 CNFNQ9BYD5 112 aa6.82□□□□□ -1.32
CAPN3-204ENST00000356316 GFRA4Q9GZZ7 299 aa6.82□□□□□ -1.32
CAPN3-204ENST00000356316 A8MWL6 223 aa6.81□□□□□ -1.32
CAPN3-204ENST00000356316 PANO1I0J062 215 aa6.81□□□□□ -1.32
CAPN3-204ENST00000356316 GATCO43716 136 aaKnown RBP6.81□□□□□ -1.32
CAPN3-204ENST00000356316 RPS10P46783 165 aaKnown RBP6.81□□□□□ -1.32
CAPN3-204ENST00000356316 BLOC1S1P78537 153 aa6.81□□□□□ -1.32
CAPN3-204ENST00000356316 TMEM101Q96IK0 257 aa6.81□□□□□ -1.32
CAPN3-204ENST00000356316 BTF3L4Q96K17 158 aa6.81□□□□□ -1.32
CAPN3-204ENST00000356316 PLA2G2DQ9UNK4 145 aa6.81□□□□□ -1.32
CAPN3-204ENST00000356316 A0A087WYN8 130 aa6.8□□□□□ -1.32
CAPN3-204ENST00000356316 TMEM250H0YL14 139 aa6.8□□□□□ -1.32
CAPN3-204ENST00000356316 I3L3M4 83 aa6.8□□□□□ -1.32
CAPN3-204ENST00000356316 K7EN84 100 aa6.8□□□□□ -1.32
CAPN3-204ENST00000356316 CEBPGP53567 150 aa6.8□□□□□ -1.32
CAPN3-204ENST00000356316 CIRBPQ14011 172 aaKnown RBP6.8□□□□□ -1.32
CAPN3-204ENST00000356316 GTSF1Q8WW33 167 aa6.8□□□□□ -1.32
CAPN3-204ENST00000356316 RPL39LQ96EH5 51 aaKnown RBP6.8□□□□□ -1.32
CAPN3-204ENST00000356316 LRP1Q07954 4544 aaKnown RBP6.8□□□□□ -1.32
CAPN3-204ENST00000356316 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-204ENST00000356316 IGKV2-29A2NJV5 120 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-204ENST00000356316 SDHAF1A6NFY7 115 aa6.79□□□□□ -1.32
CAPN3-204ENST00000356316 H3BS24 57 aa6.79□□□□□ -1.32
CAPN3-204ENST00000356316 SLPIP03973 132 aa6.79□□□□□ -1.32
CAPN3-204ENST00000356316 CHTF8P0CG12 524 aa6.79□□□□□ -1.32
CAPN3-204ENST00000356316 FGF6P10767 208 aa6.79□□□□□ -1.32
CAPN3-204ENST00000356316 ZNF25P17030 456 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-204ENST00000356316 COX6A2Q02221 97 aa6.79□□□□□ -1.32
CAPN3-204ENST00000356316 Q6ZRU5 148 aa6.79□□□□□ -1.32
CAPN3-204ENST00000356316 C7orf33Q8WU49 177 aa6.79□□□□□ -1.32
CAPN3-204ENST00000356316 CHCHD10Q8WYQ3 142 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-204ENST00000356316 NDUFS6O75380 124 aaKnown RBP6.78□□□□□ -1.32
CAPN3-204ENST00000356316 HNRNPA3P51991 378 aaKnown RBP6.78□□□□□ -1.32
CAPN3-204ENST00000356316 FOXA3P55318 350 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-204ENST00000356316 HIGD2BQ4VC39 106 aa6.78□□□□□ -1.32
CAPN3-204ENST00000356316 Q6ZNX1 250 aa6.78□□□□□ -1.32
CAPN3-204ENST00000356316 FAM231DQ6ZW35 169 aa6.78□□□□□ -1.32
CAPN3-204ENST00000356316 C15orf56Q8N910 161 aa6.78□□□□□ -1.32
CAPN3-204ENST00000356316 SPACA4Q8TDM5 124 aa6.78□□□□□ -1.32
CAPN3-204ENST00000356316 FAM210AQ96ND0 272 aa6.78□□□□□ -1.32
CAPN3-204ENST00000356316 EIF5A2Q9GZV4 153 aaKnown RBP6.78□□□□□ -1.32
CAPN3-204ENST00000356316 ST20Q9HBF5 79 aa6.78□□□□□ -1.32
CAPN3-204ENST00000356316 FAT3Q8TDW7 4589 aa6.77□□□□□ -1.33
CAPN3-204ENST00000356316 MAJINQ3KP22 176 aa6.77□□□□□ -1.33
CAPN3-204ENST00000356316 ALKAL2Q6UX46 152 aa6.77□□□□□ -1.33
CAPN3-204ENST00000356316 OR5A1Q8NGJ0 315 aa6.77□□□□□ -1.33
CAPN3-204ENST00000356316 MRAP2Q96G30 205 aa6.77□□□□□ -1.33
CAPN3-204ENST00000356316 PLAC8Q9NZF1 115 aa6.77□□□□□ -1.33
CAPN3-204ENST00000356316 PKIGQ9Y2B9 76 aa6.77□□□□□ -1.33
CAPN3-204ENST00000356316 PKHD1L1Q86WI1 4243 aa6.77□□□□□ -1.33
CAPN3-204ENST00000356316 IGKV2-24A0A0C4DH68 120 aa6.76□□□□□ -1.33
CAPN3-204ENST00000356316 TRBV6-5A0A0K0K1A5 114 aa6.76□□□□□ -1.33
CAPN3-204ENST00000356316 XCL1P47992 114 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms