RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 TMEM243Q9BU79 118 aa9.24□□□□□ -0.93
PCDHB11-201ENST00000354757 C11orf21Q9P2W6 132 aa9.24□□□□□ -0.93
PCDHB11-201ENST00000354757 ZFAND6Q6FIF0 208 aa9.24□□□□□ -0.93
PCDHB11-201ENST00000354757 Q6ZTI0 123 aa9.24□□□□□ -0.93
PCDHB11-201ENST00000354757 URB1-AS1Q96HZ7 61 aa9.24□□□□□ -0.93
PCDHB11-201ENST00000354757 CLUHP3Q96NS8 147 aa9.24□□□□□ -0.93
PCDHB11-201ENST00000354757 ANGP03950 147 aaKnown RBP9.24□□□□□ -0.93
PCDHB11-201ENST00000354757 GAGE2BQ13066 116 aa9.24□□□□□ -0.93
PCDHB11-201ENST00000354757 PMVKQ15126 192 aa9.24□□□□□ -0.93
PCDHB11-201ENST00000354757 GAGE2EQ4V326 116 aa9.24□□□□□ -0.93
PCDHB11-201ENST00000354757 C2orf91Q6ZV80 131 aa9.24□□□□□ -0.93
PCDHB11-201ENST00000354757 GAGE2DQ9UEU5 116 aa9.24□□□□□ -0.93
PCDHB11-201ENST00000354757 MUC4Q99102 2169 aa9.24□□□□□ -0.93
PCDHB11-201ENST00000354757 PRSS29PA6NIE9 313 aa9.23□□□□□ -0.93
PCDHB11-201ENST00000354757 TRBV7-9A0A0J9YWB2 115 aa9.23□□□□□ -0.93
PCDHB11-201ENST00000354757 TEX15Q9BXT5 2789 aa9.23□□□□□ -0.93
PCDHB11-201ENST00000354757 IGLL5B9A064 214 aa9.23□□□□□ -0.93
PCDHB11-201ENST00000354757 SIVA1O15304 175 aa9.23□□□□□ -0.93
PCDHB11-201ENST00000354757 GYPEP15421 78 aa9.23□□□□□ -0.93
PCDHB11-201ENST00000354757 IGLV10-54A0A075B6I4 117 aa9.22□□□□□ -0.93
PCDHB11-201ENST00000354757 PFN2P35080 140 aa9.22□□□□□ -0.93
PCDHB11-201ENST00000354757 CEMP1Q6PRD7 247 aaPredicted RBP9.22□□□□□ -0.93
PCDHB11-201ENST00000354757 OPRPNQ99935 248 aaPredicted RBP9.22□□□□□ -0.93
PCDHB11-201ENST00000354757 C20orf78Q9BR46 151 aa9.22□□□□□ -0.93
PCDHB11-201ENST00000354757 GATD1Q8NB37 220 aa9.22□□□□□ -0.93
PCDHB11-201ENST00000354757 UNC79Q9P2D8 2635 aa9.22□□□□□ -0.93
PCDHB11-201ENST00000354757 F8VRH5 84 aa9.22□□□□□ -0.93
PCDHB11-201ENST00000354757 LGALS9O00182 355 aa9.22□□□□□ -0.93
PCDHB11-201ENST00000354757 FAM110AQ9BQ89 295 aa9.22□□□□□ -0.93
PCDHB11-201ENST00000354757 SS18L2Q9UHA2 77 aa9.22□□□□□ -0.93
PCDHB11-201ENST00000354757 CRYBA4P53673 196 aa9.21□□□□□ -0.93
PCDHB11-201ENST00000354757 ZNF493Q6ZR52 646 aa9.21□□□□□ -0.93
PCDHB11-201ENST00000354757 STAB1Q9NY15 2570 aa9.21□□□□□ -0.93
PCDHB11-201ENST00000354757 PRSS47A8MTI9 375 aa9.21□□□□□ -0.93
PCDHB11-201ENST00000354757 OXLD1Q5BKU9 147 aa9.21□□□□□ -0.93
PCDHB11-201ENST00000354757 PROK1P58294 105 aa9.21□□□□□ -0.94
PCDHB11-201ENST00000354757 TRAV25A0A0B4J276 109 aa9.2□□□□□ -0.94
PCDHB11-201ENST00000354757 RHOHQ15669 191 aa9.2□□□□□ -0.94
PCDHB11-201ENST00000354757 A0A0J9YXV3 536 aa9.2□□□□□ -0.94
PCDHB11-201ENST00000354757 B5MCH6 92 aa9.2□□□□□ -0.94
PCDHB11-201ENST00000354757 XCL1P47992 114 aa9.2□□□□□ -0.94
PCDHB11-201ENST00000354757 NXPH4O95158 308 aa9.2□□□□□ -0.94
PCDHB11-201ENST00000354757 GAS8-AS1O95177 125 aa9.2□□□□□ -0.94
PCDHB11-201ENST00000354757 ZFP2Q6ZN57 461 aa9.2□□□□□ -0.94
PCDHB11-201ENST00000354757 NDUFA11Q86Y39 141 aa9.2□□□□□ -0.94
PCDHB11-201ENST00000354757 LRBAP50851 2863 aa9.2□□□□□ -0.94
PCDHB11-201ENST00000354757 C9JAW5 83 aa9.2□□□□□ -0.94
PCDHB11-201ENST00000354757 IGLC6P0CF74 106 aa9.2□□□□□ -0.94
PCDHB11-201ENST00000354757 DCANP1Q8TF63 244 aa9.2□□□□□ -0.94
PCDHB11-201ENST00000354757 Q9HAA7 133 aa9.2□□□□□ -0.94
PCDHB11-201ENST00000354757 C5orf38Q86SI9 138 aa9.19□□□□□ -0.94
PCDHB11-201ENST00000354757 PTH2Q96A98 100 aa9.19□□□□□ -0.94
PCDHB11-201ENST00000354757 C16orf74Q96GX8 76 aa9.19□□□□□ -0.94
PCDHB11-201ENST00000354757 DCHS1Q96JQ0 3298 aa9.18□□□□□ -0.94
PCDHB11-201ENST00000354757 IGKV2D-26A0A0A0MRZ7 120 aa9.18□□□□□ -0.94
PCDHB11-201ENST00000354757 SS18Q15532 418 aa9.18□□□□□ -0.94
PCDHB11-201ENST00000354757 TRBV20-1A0A075B6N2 111 aa9.18□□□□□ -0.94
PCDHB11-201ENST00000354757 DNAL4O96015 105 aa9.18□□□□□ -0.94
PCDHB11-201ENST00000354757 PLEKHB2Q96CS7 222 aa9.18□□□□□ -0.94
PCDHB11-201ENST00000354757 TRBV6-1A0A0K0K1D8 114 aa9.18□□□□□ -0.94
PCDHB11-201ENST00000354757 MRPS12O15235 138 aaKnown RBP9.18□□□□□ -0.94
PCDHB11-201ENST00000354757 RASL10AQ92737 203 aa9.18□□□□□ -0.94
PCDHB11-201ENST00000354757 TMEM141Q96I45 108 aa9.18□□□□□ -0.94
PCDHB11-201ENST00000354757 SPART-AS1P0CW21 52 aa9.17□□□□□ -0.94
PCDHB11-201ENST00000354757 PSCAO43653 123 aa9.17□□□□□ -0.94
PCDHB11-201ENST00000354757 FGF6P10767 208 aa9.17□□□□□ -0.94
PCDHB11-201ENST00000354757 UBE2WQ96B02 151 aa9.17□□□□□ -0.94
PCDHB11-201ENST00000354757 MORN3Q6PF18 240 aaPredicted RBP9.17□□□□□ -0.94
PCDHB11-201ENST00000354757 MYMXA0A1B0GTQ4 84 aa9.16□□□□□ -0.94
PCDHB11-201ENST00000354757 ATP5G1P05496 136 aa9.16□□□□□ -0.94
PCDHB11-201ENST00000354757 HHLA3Q9XRX5 114 aa9.16□□□□□ -0.94
PCDHB11-201ENST00000354757 TSPAN13O95857 204 aa9.16□□□□□ -0.94
PCDHB11-201ENST00000354757 FAM222AQ5U5X8 452 aa9.16□□□□□ -0.94
PCDHB11-201ENST00000354757 ATP6V0E2Q8NHE4 81 aa9.16□□□□□ -0.94
PCDHB11-201ENST00000354757 PPDPFLQ8WWR9 84 aa9.16□□□□□ -0.94
PCDHB11-201ENST00000354757 NDUFA12Q9UI09 145 aa9.16□□□□□ -0.94
PCDHB11-201ENST00000354757 COL6A5A8TX70 2615 aa9.16□□□□□ -0.94
PCDHB11-201ENST00000354757 K7EQD1 137 aa9.15□□□□□ -0.94
PCDHB11-201ENST00000354757 SCGB1A1P11684 91 aa9.15□□□□□ -0.94
PCDHB11-201ENST00000354757 ODF1Q14990 250 aa9.15□□□□□ -0.94
PCDHB11-201ENST00000354757 TMEM263Q8WUH6 116 aaKnown RBP9.15□□□□□ -0.94
PCDHB11-201ENST00000354757 ERG28Q9UKR5 140 aa9.15□□□□□ -0.94
PCDHB11-201ENST00000354757 IGHV3-30P01768 117 aa9.15□□□□□ -0.94
PCDHB11-201ENST00000354757 IGHV3-33P01772 117 aa9.15□□□□□ -0.94
PCDHB11-201ENST00000354757 IGHV3-30-3P0DP02 117 aa9.15□□□□□ -0.94
PCDHB11-201ENST00000354757 IGHV3-30-5P0DP03 117 aa9.15□□□□□ -0.94
PCDHB11-201ENST00000354757 INSL3P51460 131 aa9.15□□□□□ -0.94
PCDHB11-201ENST00000354757 ZMAT4Q9H898 229 aa9.15□□□□□ -0.94
PCDHB11-201ENST00000354757 UBR5O95071 2799 aaPredicted RBP9.15□□□□□ -0.94
PCDHB11-201ENST00000354757 TRBV7-3A0A075B6L6 115 aa9.15□□□□□ -0.95
PCDHB11-201ENST00000354757 ODF3L2Q3SX64 289 aa9.15□□□□□ -0.95
PCDHB11-201ENST00000354757 COL27A1Q8IZC6 1860 aaPredicted RBP9.14□□□□□ -0.95
PCDHB11-201ENST00000354757 UFSP1Q6NVU6 142 aa9.14□□□□□ -0.95
PCDHB11-201ENST00000354757 RNASE3P12724 160 aaKnown RBP9.14□□□□□ -0.95
PCDHB11-201ENST00000354757 RNF152Q8N8N0 203 aa9.14□□□□□ -0.95
PCDHB11-201ENST00000354757 J3QQQ9 107 aa9.14□□□□□ -0.95
PCDHB11-201ENST00000354757 COPS9Q8WXC6 57 aa9.14□□□□□ -0.95
PCDHB11-201ENST00000354757 TRAV8-4A0A0B4J246 113 aa9.13□□□□□ -0.95
PCDHB11-201ENST00000354757 SPANXB1Q9NS25 103 aaPredicted RBP9.13□□□□□ -0.95
PCDHB11-201ENST00000354757 SPENQ96T58 3664 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms