RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 E9PLD3 99 aa11.22□□□□□ -0.61
MBD1-205ENST00000353909 NDUFA7O95182 113 aa11.22□□□□□ -0.61
MBD1-205ENST00000353909 BEAN1Q3B7T3 259 aa11.22□□□□□ -0.61
MBD1-205ENST00000353909 FAM104AQ969W3 186 aa11.22□□□□□ -0.61
MBD1-205ENST00000353909 TNFRSF18Q9Y5U5 241 aa11.22□□□□□ -0.61
MBD1-205ENST00000353909 EDA2RQ9HAV5 297 aa11.22□□□□□ -0.61
MBD1-205ENST00000353909 TRGV1A0A0A0MS02 117 aa11.21□□□□□ -0.61
MBD1-205ENST00000353909 K7ERJ3 54 aa11.21□□□□□ -0.61
MBD1-205ENST00000353909 SPATA3Q8NHX4 192 aa11.21□□□□□ -0.61
MBD1-205ENST00000353909 PHLDA1Q8WV24 401 aaPredicted RBP11.21□□□□□ -0.61
MBD1-205ENST00000353909 TRRAPQ9Y4A5 3859 aa11.21□□□□□ -0.61
MBD1-205ENST00000353909 RNASE13Q5GAN3 156 aaKnown RBP11.21□□□□□ -0.62
MBD1-205ENST00000353909 Q6ZTI0 123 aa11.21□□□□□ -0.62
MBD1-205ENST00000353909 SPXQ9BT56 116 aa11.21□□□□□ -0.62
MBD1-205ENST00000353909 MYMXA0A1B0GTQ4 84 aa11.2□□□□□ -0.62
MBD1-205ENST00000353909 A6NDN8 102 aa11.2□□□□□ -0.62
MBD1-205ENST00000353909 TMEM170BQ5T4T1 132 aa11.2□□□□□ -0.62
MBD1-205ENST00000353909 TEP1Q99973 2627 aaKnown RBP11.2□□□□□ -0.62
MBD1-205ENST00000353909 IGLV4-3A0A075B6K6 122 aa11.2□□□□□ -0.62
MBD1-205ENST00000353909 IGHV3-53P01767 116 aa11.2□□□□□ -0.62
MBD1-205ENST00000353909 PIK3CD-AS1Q5SR53 167 aa11.2□□□□□ -0.62
MBD1-205ENST00000353909 ZNF479Q96JC4 524 aa11.2□□□□□ -0.62
MBD1-205ENST00000353909 H3BUT2 72 aa11.19□□□□□ -0.62
MBD1-205ENST00000353909 RS1O15537 224 aa11.19□□□□□ -0.62
MBD1-205ENST00000353909 PTH2Q96A98 100 aa11.19□□□□□ -0.62
MBD1-205ENST00000353909 PLEKHB2Q96CS7 222 aa11.19□□□□□ -0.62
MBD1-205ENST00000353909 LINC01549A6NIU2 74 aa11.19□□□□□ -0.62
MBD1-205ENST00000353909 TSPEAR-AS2P59090 65 aa11.19□□□□□ -0.62
MBD1-205ENST00000353909 IL17DQ8TAD2 202 aa11.19□□□□□ -0.62
MBD1-205ENST00000353909 VPS25Q9BRG1 176 aa11.19□□□□□ -0.62
MBD1-205ENST00000353909 CEND1Q8N111 149 aa11.18□□□□□ -0.62
MBD1-205ENST00000353909 H3BRM9 83 aa11.18□□□□□ -0.62
MBD1-205ENST00000353909 OR4C5Q8NGB2 326 aa11.18□□□□□ -0.62
MBD1-205ENST00000353909 ZNF815PA8K554 130 aa11.17□□□□□ -0.62
MBD1-205ENST00000353909 TM2D2Q9BX73 214 aa11.17□□□□□ -0.62
MBD1-205ENST00000353909 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.17□□□□□ -0.62
MBD1-205ENST00000353909 A0A0J9YXV3 536 aa11.17□□□□□ -0.62
MBD1-205ENST00000353909 IGKV2-29A2NJV5 120 aaPredicted RBP11.17□□□□□ -0.62
MBD1-205ENST00000353909 CHCHD7Q9BUK0 85 aa11.17□□□□□ -0.62
MBD1-205ENST00000353909 NOP10Q9NPE3 64 aaKnown RBP11.17□□□□□ -0.62
MBD1-205ENST00000353909 NHP2Q9NX24 153 aaKnown RBP11.17□□□□□ -0.62
MBD1-205ENST00000353909 C9orf118A6NHY6 69 aa11.17□□□□□ -0.62
MBD1-205ENST00000353909 RHODO00212 210 aa11.17□□□□□ -0.62
MBD1-205ENST00000353909 SVIPQ8NHG7 77 aa11.17□□□□□ -0.62
MBD1-205ENST00000353909 HIST1H4GQ99525 98 aa11.17□□□□□ -0.62
MBD1-205ENST00000353909 IGHV3-64A0A075B6Q5 118 aa11.16□□□□□ -0.62
MBD1-205ENST00000353909 TMEM263Q8WUH6 116 aaKnown RBP11.16□□□□□ -0.62
MBD1-205ENST00000353909 VCX2Q9H322 139 aa11.16□□□□□ -0.62
MBD1-205ENST00000353909 TRBV7-3A0A075B6L6 115 aa11.15□□□□□ -0.62
MBD1-205ENST00000353909 PLAC8L1A1L4L8 177 aa11.15□□□□□ -0.62
MBD1-205ENST00000353909 PF4P02776 101 aa11.15□□□□□ -0.62
MBD1-205ENST00000353909 PAPPA-AS1Q5QFB9 102 aa11.15□□□□□ -0.62
MBD1-205ENST00000353909 CSNK1G2-AS1Q8NCQ2 148 aa11.15□□□□□ -0.62
MBD1-205ENST00000353909 TMEM238C9JI98 176 aa11.14□□□□□ -0.63
MBD1-205ENST00000353909 SMIM13P0DJ93 91 aa11.14□□□□□ -0.63
MBD1-205ENST00000353909 SCGB1D4Q6XE38 83 aa11.14□□□□□ -0.63
MBD1-205ENST00000353909 NFE4Q86UQ8 179 aa11.14□□□□□ -0.63
MBD1-205ENST00000353909 NDUFA11Q86Y39 141 aa11.14□□□□□ -0.63
MBD1-205ENST00000353909 LINC00482Q8N8I6 264 aa11.14□□□□□ -0.63
MBD1-205ENST00000353909 F8P00451 2351 aa11.13□□□□□ -0.63
MBD1-205ENST00000353909 ZNF22P17026 224 aaPredicted RBP11.13□□□□□ -0.63
MBD1-205ENST00000353909 CIDEAO60543 219 aa11.13□□□□□ -0.63
MBD1-205ENST00000353909 UBE2D4Q9Y2X8 147 aa11.13□□□□□ -0.63
MBD1-205ENST00000353909 OCIAD2Q56VL3 154 aa11.12□□□□□ -0.63
MBD1-205ENST00000353909 AMELXQ99217 191 aa11.12□□□□□ -0.63
MBD1-205ENST00000353909 PYGO1Q9Y3Y4 419 aa11.12□□□□□ -0.63
MBD1-205ENST00000353909 HERVK_113P61574 105 aa11.12□□□□□ -0.63
MBD1-205ENST00000353909 SLC25A29Q8N8R3 303 aa11.12□□□□□ -0.63
MBD1-205ENST00000353909 FAM110AQ9BQ89 295 aa11.12□□□□□ -0.63
MBD1-205ENST00000353909 GAGE12BA1L429 117 aa11.11□□□□□ -0.63
MBD1-205ENST00000353909 GAGE7O76087 117 aa11.11□□□□□ -0.63
MBD1-205ENST00000353909 GAGE12FP0CL80 117 aa11.11□□□□□ -0.63
MBD1-205ENST00000353909 GAGE12GP0CL81 117 aa11.11□□□□□ -0.63
MBD1-205ENST00000353909 GAGE12IP0CL82 117 aa11.11□□□□□ -0.63
MBD1-205ENST00000353909 Q6ZUT4 128 aa11.11□□□□□ -0.63
MBD1-205ENST00000353909 TMEM223A0PJW6 202 aa11.11□□□□□ -0.63
MBD1-205ENST00000353909 CMC4P56277 68 aaPredicted RBP11.11□□□□□ -0.63
MBD1-205ENST00000353909 J3QQQ9 107 aa11.1□□□□□ -0.63
MBD1-205ENST00000353909 TAL2Q16559 108 aa11.1□□□□□ -0.63
MBD1-205ENST00000353909 DNAJC30Q96LL9 226 aa11.1□□□□□ -0.63
MBD1-205ENST00000353909 A0A0J9YY99 117 aa11.1□□□□□ -0.63
MBD1-205ENST00000353909 GAGE10A6NGK3 116 aa11.1□□□□□ -0.63
MBD1-205ENST00000353909 A0A1W2PPM0 123 aa11.09□□□□□ -0.63
MBD1-205ENST00000353909 C12orf74Q32Q52 190 aa11.09□□□□□ -0.63
MBD1-205ENST00000353909 LINC00694P0DN24 101 aa11.09□□□□□ -0.63
MBD1-205ENST00000353909 DAZ2Q13117 558 aaKnown RBP11.09□□□□□ -0.63
MBD1-205ENST00000353909 SAMD5Q5TGI4 173 aa11.09□□□□□ -0.63
MBD1-205ENST00000353909 GAGE12JA6NER3 117 aa11.08□□□□□ -0.63
MBD1-205ENST00000353909 GAGE4Q13068 117 aa11.08□□□□□ -0.63
MBD1-205ENST00000353909 GAGE5Q13069 117 aa11.08□□□□□ -0.63
MBD1-205ENST00000353909 GAGE13Q4V321 117 aa11.08□□□□□ -0.63
MBD1-205ENST00000353909 NTM-AS1Q6ZSK4 140 aa11.08□□□□□ -0.63
MBD1-205ENST00000353909 TRAV8-3A0A0A6YYJ7 113 aa11.08□□□□□ -0.64
MBD1-205ENST00000353909 TRAV4A0A0B4J268 109 aa11.08□□□□□ -0.64
MBD1-205ENST00000353909 LOC100131303A0A0U1RQF7 123 aa11.08□□□□□ -0.64
MBD1-205ENST00000353909 K7EQD1 137 aa11.08□□□□□ -0.64
MBD1-205ENST00000353909 SRSF9Q13242 221 aaKnown RBP eCLIP11.08□□□□□ -0.64
MBD1-205ENST00000353909 RRN3P1Q2M238 152 aa11.08□□□□□ -0.64
MBD1-205ENST00000353909 TRGV2A0A075B6R0 118 aa11.08□□□□□ -0.64
MBD1-205ENST00000353909 C16orf74Q96GX8 76 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms